RNA–Protein interactions for RNA: ENST00000505397.1

LIN54-204, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIN54, Length 2,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-204ENST00000505397 KPNA5O15131 536 aa16.31■□□□□ 0.2
LIN54-204ENST00000505397 FAM20BO75063 409 aa16.31■□□□□ 0.2
LIN54-204ENST00000505397 FADS2O95864 444 aaKnown RBP16.31■□□□□ 0.2
LIN54-204ENST00000505397 ABCB1P08183 1280 aaPredicted RBP16.31■□□□□ 0.2
LIN54-204ENST00000505397 PSMB9P28065 219 aa16.31■□□□□ 0.2
LIN54-204ENST00000505397 SERPINB10P48595 397 aa16.31■□□□□ 0.2
LIN54-204ENST00000505397 PCDH1Q08174 1060 aa16.31■□□□□ 0.2
LIN54-204ENST00000505397 ZNF805Q5CZA5 627 aa16.31■□□□□ 0.2
LIN54-204ENST00000505397 CAMKMTQ7Z624 323 aa16.31■□□□□ 0.2
LIN54-204ENST00000505397 ENTHD1Q8IYW4 607 aa16.31■□□□□ 0.2
LIN54-204ENST00000505397 UBE2FQ969M7 185 aa16.31■□□□□ 0.2
LIN54-204ENST00000505397 SLIRPQ9GZT3 109 aaKnown RBP16.31■□□□□ 0.2
LIN54-204ENST00000505397 OBP2AQ9NY56 170 aa16.31■□□□□ 0.2
LIN54-204ENST00000505397 BTNL2Q9UIR0 455 aa16.31■□□□□ 0.2
LIN54-204ENST00000505397 PABPN1LA6NDY0 278 aaKnown RBP16.3■□□□□ 0.2
LIN54-204ENST00000505397 FKBP9O95302 570 aa16.3■□□□□ 0.2
LIN54-204ENST00000505397 CPSF4O95639 269 aaKnown RBP16.3■□□□□ 0.2
LIN54-204ENST00000505397 TGM1P22735 817 aa16.3■□□□□ 0.2
LIN54-204ENST00000505397 NCS1P62166 190 aa16.3■□□□□ 0.2
LIN54-204ENST00000505397 CSNK2BP67870 215 aa16.3■□□□□ 0.2
LIN54-204ENST00000505397 IRF8Q02556 426 aa16.3■□□□□ 0.2
LIN54-204ENST00000505397 PDGFRLQ15198 375 aa16.3■□□□□ 0.2
LIN54-204ENST00000505397 FNDC3BQ53EP0 1204 aaKnown RBP16.3■□□□□ 0.2
LIN54-204ENST00000505397 ATG16L2Q8NAA4 619 aa16.3■□□□□ 0.2
LIN54-204ENST00000505397 ST13P5Q8NFI4 369 aaPredicted RBP16.3■□□□□ 0.2
LIN54-204ENST00000505397 CD84Q9UIB8 345 aa16.3■□□□□ 0.2
LIN54-204ENST00000505397 OSGIN1Q9UJX0 560 aa16.3■□□□□ 0.2
LIN54-204ENST00000505397 H0YIV9 168 aa16.3■□□□□ 0.2
LIN54-204ENST00000505397 SCAMP2O15127 329 aaKnown RBP16.3■□□□□ 0.2
LIN54-204ENST00000505397 SLCO2B1O94956 709 aa16.3■□□□□ 0.2
LIN54-204ENST00000505397 CTSLP07711 333 aa16.3■□□□□ 0.2
LIN54-204ENST00000505397 PXNP49023 591 aaPredicted RBP16.3■□□□□ 0.2
LIN54-204ENST00000505397 LSM3P62310 102 aaKnown RBP16.3■□□□□ 0.2
LIN54-204ENST00000505397 RAE1P78406 368 aaKnown RBP16.3■□□□□ 0.2
LIN54-204ENST00000505397 CAMK2GQ13555 558 aaPredicted RBP16.3■□□□□ 0.2
LIN54-204ENST00000505397 CCDC81Q6ZN84 652 aa16.3■□□□□ 0.2
LIN54-204ENST00000505397 TSEN54Q7Z6J9 526 aaKnown RBP16.3■□□□□ 0.2
LIN54-204ENST00000505397 FAM124AQ86V42 546 aa16.3■□□□□ 0.2
LIN54-204ENST00000505397 KLHDC8AQ8IYD2 350 aa16.3■□□□□ 0.2
LIN54-204ENST00000505397 STARD8Q92502 1023 aa16.3■□□□□ 0.2
LIN54-204ENST00000505397 LGALS12Q96DT0 336 aa16.3■□□□□ 0.2
LIN54-204ENST00000505397 PSD2Q9BQI7 771 aa16.3■□□□□ 0.2
LIN54-204ENST00000505397 DUSP26Q9BV47 211 aa16.3■□□□□ 0.2
LIN54-204ENST00000505397 PCDH12Q9NPG4 1184 aa16.3■□□□□ 0.2
LIN54-204ENST00000505397 INIPQ9NRY2 104 aa16.3■□□□□ 0.2
LIN54-204ENST00000505397 KIF17Q9P2E2 1029 aa16.3■□□□□ 0.2
LIN54-204ENST00000505397 PADI2Q9Y2J8 665 aa16.3■□□□□ 0.2
LIN54-204ENST00000505397 PCDHGA6Q9Y5G7 932 aa16.3■□□□□ 0.2
LIN54-204ENST00000505397 TSPAN11A1L157 253 aa16.29■□□□□ 0.2
LIN54-204ENST00000505397 EPOPA6NHQ4 379 aa16.29■□□□□ 0.2
LIN54-204ENST00000505397 HSD3B1P14060 373 aa16.29■□□□□ 0.2
LIN54-204ENST00000505397 HSD3B2P26439 372 aa16.29■□□□□ 0.2
LIN54-204ENST00000505397 TPP2P29144 1249 aaPredicted RBP16.29■□□□□ 0.2
LIN54-204ENST00000505397 ALDH4A1P30038 563 aa16.29■□□□□ 0.2
LIN54-204ENST00000505397 DGCR6Q14129 220 aa16.29■□□□□ 0.2
LIN54-204ENST00000505397 EIF4HQ15056 248 aaKnown RBP16.29■□□□□ 0.2
LIN54-204ENST00000505397 INAQ16352 499 aa16.29■□□□□ 0.2
LIN54-204ENST00000505397 PAGE2BQ5JRK9 111 aa16.29■□□□□ 0.2
LIN54-204ENST00000505397 MLIPQ5VWP3 458 aa16.29■□□□□ 0.2
LIN54-204ENST00000505397 FAM83CQ9BQN1 747 aa16.29■□□□□ 0.2
LIN54-204ENST00000505397 BRF2Q9HAW0 419 aa16.29■□□□□ 0.2
LIN54-204ENST00000505397 FZD4Q9ULV1 537 aa16.29■□□□□ 0.2
LIN54-204ENST00000505397 GCM2O75603 506 aaPredicted RBP16.29■□□□□ 0.2
LIN54-204ENST00000505397 GSTM1P09488 218 aa16.29■□□□□ 0.2
LIN54-204ENST00000505397 NUDT7P0C024 238 aa16.29■□□□□ 0.2
LIN54-204ENST00000505397 MAGEA8P43361 318 aa16.29■□□□□ 0.2
LIN54-204ENST00000505397 SLC6A11P48066 632 aa16.29■□□□□ 0.2
LIN54-204ENST00000505397 DOC2AQ14183 400 aa16.29■□□□□ 0.2
LIN54-204ENST00000505397 POM121L1PQ3SYA9 428 aa16.29■□□□□ 0.2
LIN54-204ENST00000505397 TMEM236Q5W0B7 351 aa16.29■□□□□ 0.2
LIN54-204ENST00000505397 ERAP2Q6P179 960 aa16.29■□□□□ 0.2
LIN54-204ENST00000505397 THOC6Q86W42 341 aaKnown RBP16.29■□□□□ 0.2
LIN54-204ENST00000505397 NXPE3Q969Y0 559 aa16.29■□□□□ 0.2
LIN54-204ENST00000505397 SH3KBP1Q96B97 665 aa16.29■□□□□ 0.2
LIN54-204ENST00000505397 MRPL38Q96DV4 380 aaKnown RBP16.29■□□□□ 0.2
LIN54-204ENST00000505397 RASSF1Q9NS23 344 aa16.29■□□□□ 0.2
LIN54-204ENST00000505397 DKK3Q9UBP4 350 aa16.29■□□□□ 0.2
LIN54-204ENST00000505397 TMEM247A6NEH6 219 aa16.28■□□□□ 0.2
LIN54-204ENST00000505397 GABRR3A8MPY1 467 aa16.28■□□□□ 0.2
LIN54-204ENST00000505397 PRRT4C9JH25 899 aa16.28■□□□□ 0.2
LIN54-204ENST00000505397 E7EQ34 232 aa16.28■□□□□ 0.2
LIN54-204ENST00000505397 KPNA3O00505 521 aaPredicted RBP16.28■□□□□ 0.2
LIN54-204ENST00000505397 PSIP1O75475 530 aaKnown RBP16.28■□□□□ 0.2
LIN54-204ENST00000505397 XKR6Q5GH73 641 aa16.28■□□□□ 0.2
LIN54-204ENST00000505397 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.28■□□□□ 0.2
LIN54-204ENST00000505397 GRHL2Q6ISB3 625 aa16.28■□□□□ 0.2
LIN54-204ENST00000505397 ADCK1Q86TW2 530 aa16.28■□□□□ 0.2
LIN54-204ENST00000505397 DNASE1L2Q92874 299 aa16.28■□□□□ 0.2
LIN54-204ENST00000505397 MTERF1Q99551 399 aaKnown RBP16.28■□□□□ 0.2
LIN54-204ENST00000505397 TRPV4Q9HBA0 871 aa16.28■□□□□ 0.2
LIN54-204ENST00000505397 ANKHQ9HCJ1 492 aa16.28■□□□□ 0.2
LIN54-204ENST00000505397 RAD18Q9NS91 495 aa16.28■□□□□ 0.2
LIN54-204ENST00000505397 PLCXD1Q9NUJ7 323 aa16.28■□□□□ 0.2
LIN54-204ENST00000505397 CORO2BQ9UQ03 480 aa16.28■□□□□ 0.2
LIN54-204ENST00000505397 PCDHGB3Q9Y5G1 929 aa16.28■□□□□ 0.2
LIN54-204ENST00000505397 AP2A2O94973 939 aa16.28■□□□□ 0.2
LIN54-204ENST00000505397 PRNPP04156 253 aa16.28■□□□□ 0.2
LIN54-204ENST00000505397 LCKP06239 509 aa16.28■□□□□ 0.2
LIN54-204ENST00000505397 TIMP2P16035 220 aa16.28■□□□□ 0.2
LIN54-204ENST00000505397 PPIBP23284 216 aaKnown RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms