RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, human

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDLIM5-208	ENST00000504489	TRMO	Q9BU70	441 aa		11.32	□□□□□ -0.6
PDLIM5-208	ENST00000504489	ACSS2	Q9NR19	701 aa		11.32	□□□□□ -0.6
PDLIM5-208	ENST00000504489	ZNF446	Q9NWS9	450 aa		11.32	□□□□□ -0.6
PDLIM5-208	ENST00000504489	NDOR1	Q9UHB4	597 aa		11.32	□□□□□ -0.6
PDLIM5-208	ENST00000504489	ZNF225	Q9UK10	706 aa		11.32	□□□□□ -0.6
PDLIM5-208	ENST00000504489	RAX	Q9Y2V3	346 aa		11.32	□□□□□ -0.6
PDLIM5-208	ENST00000504489		A0A087WV48	116 aa		11.31	□□□□□ -0.6
PDLIM5-208	ENST00000504489	LOC101059948	A0A1B0GTJ6	334 aa		11.31	□□□□□ -0.6
PDLIM5-208	ENST00000504489		A0A1B0GTL3	188 aa		11.31	□□□□□ -0.6
PDLIM5-208	ENST00000504489	TMEM120B	A0PK00	339 aa		11.31	□□□□□ -0.6
PDLIM5-208	ENST00000504489	LRIT2	A6NDA9	550 aa		11.31	□□□□□ -0.6
PDLIM5-208	ENST00000504489	C21orf140	B9A014	251 aa		11.31	□□□□□ -0.6
PDLIM5-208	ENST00000504489	TERT	O14746	1132 aa	Known RBP	11.31	□□□□□ -0.6
PDLIM5-208	ENST00000504489	BIRC5	O15392	142 aa		11.31	□□□□□ -0.6
PDLIM5-208	ENST00000504489	KLK10	O43240	276 aa		11.31	□□□□□ -0.6
PDLIM5-208	ENST00000504489	FOXS1	O43638	330 aa		11.31	□□□□□ -0.6
PDLIM5-208	ENST00000504489	NPHS1	O60500	1241 aa		11.31	□□□□□ -0.6
PDLIM5-208	ENST00000504489	OR4F21	O95013	312 aa		11.31	□□□□□ -0.6
PDLIM5-208	ENST00000504489	NSA2	O95478	260 aa	Known RBP	11.31	□□□□□ -0.6
PDLIM5-208	ENST00000504489	ESRRB	O95718	433 aa		11.31	□□□□□ -0.6
PDLIM5-208	ENST00000504489	TBX6	O95947	436 aa	Predicted RBP	11.31	□□□□□ -0.6
PDLIM5-208	ENST00000504489	CAPN1	P07384	714 aa		11.31	□□□□□ -0.6
PDLIM5-208	ENST00000504489	SMIM10L1	P0DMW3	83 aa		11.31	□□□□□ -0.6
PDLIM5-208	ENST00000504489	ITGAX	P20702	1163 aa		11.31	□□□□□ -0.6
PDLIM5-208	ENST00000504489	HPD	P32754	393 aa	Predicted RBP	11.31	□□□□□ -0.6
PDLIM5-208	ENST00000504489	ARL1	P40616	181 aa	Predicted RBP	11.31	□□□□□ -0.6
PDLIM5-208	ENST00000504489	SERPINB4	P48594	390 aa		11.31	□□□□□ -0.6
PDLIM5-208	ENST00000504489	STXBP1	P61764	594 aa	Known RBP	11.31	□□□□□ -0.6
PDLIM5-208	ENST00000504489	CYP4F2	P78329	520 aa		11.31	□□□□□ -0.6
PDLIM5-208	ENST00000504489	HERC3	Q15034	1050 aa		11.31	□□□□□ -0.6
PDLIM5-208	ENST00000504489	ZRSR2	Q15696	482 aa	Known RBP	11.31	□□□□□ -0.6
PDLIM5-208	ENST00000504489	ADPRM	Q3LIE5	342 aa		11.31	□□□□□ -0.6
PDLIM5-208	ENST00000504489	ADNP2	Q6IQ32	1131 aa		11.31	□□□□□ -0.6
PDLIM5-208	ENST00000504489	LCN10	Q6JVE6	187 aa		11.31	□□□□□ -0.6
PDLIM5-208	ENST00000504489	NIPAL1	Q6NVV3	410 aa		11.31	□□□□□ -0.6
PDLIM5-208	ENST00000504489	FAM199X	Q6PEV8	388 aa	Predicted RBP	11.31	□□□□□ -0.6
PDLIM5-208	ENST00000504489	GPRIN3	Q6ZVF9	776 aa		11.31	□□□□□ -0.6
PDLIM5-208	ENST00000504489	AFAP1L2	Q8N4X5	818 aa		11.31	□□□□□ -0.6
PDLIM5-208	ENST00000504489	GOLGA6L1	Q8N7Z2	621 aa		11.31	□□□□□ -0.6
PDLIM5-208	ENST00000504489	OR6Y1	Q8NGX8	325 aa		11.31	□□□□□ -0.6
PDLIM5-208	ENST00000504489	WDR20	Q8TBZ3	569 aa		11.31	□□□□□ -0.6
PDLIM5-208	ENST00000504489	CT55	Q8WUE5	264 aa		11.31	□□□□□ -0.6
PDLIM5-208	ENST00000504489	SMIM10	Q96HG1	83 aa		11.31	□□□□□ -0.6
PDLIM5-208	ENST00000504489	NAF1	Q96HR8	494 aa	Known RBP	11.31	□□□□□ -0.6
PDLIM5-208	ENST00000504489	MECR	Q9BV79	373 aa		11.31	□□□□□ -0.6
PDLIM5-208	ENST00000504489	MS4A8	Q9BY19	250 aa		11.31	□□□□□ -0.6
PDLIM5-208	ENST00000504489	CHST8	Q9H2A9	424 aa		11.31	□□□□□ -0.6
PDLIM5-208	ENST00000504489	ACBD3	Q9H3P7	528 aa		11.31	□□□□□ -0.6
PDLIM5-208	ENST00000504489	ZNF304	Q9HCX3	659 aa		11.31	□□□□□ -0.6
PDLIM5-208	ENST00000504489	PSD3	Q9NYI0	1048 aa		11.31	□□□□□ -0.6
PDLIM5-208	ENST00000504489	TRPS1	Q9UHF7	1281 aa		11.31	□□□□□ -0.6
PDLIM5-208	ENST00000504489	PPT2	Q9UMR5	302 aa		11.31	□□□□□ -0.6
PDLIM5-208	ENST00000504489	MRPS2	Q9Y399	296 aa	Known RBP	11.31	□□□□□ -0.6
PDLIM5-208	ENST00000504489	CELSR3	Q9NYQ7	3312 aa		11.3	□□□□□ -0.6
PDLIM5-208	ENST00000504489	HMGB1P1	B2RPK0	211 aa	Predicted RBP	11.3	□□□□□ -0.6
PDLIM5-208	ENST00000504489		C9J4A7	227 aa		11.3	□□□□□ -0.6
PDLIM5-208	ENST00000504489		H0YIG0	161 aa		11.3	□□□□□ -0.6
PDLIM5-208	ENST00000504489	FOXE1	O00358	373 aa	Predicted RBP	11.3	□□□□□ -0.6
PDLIM5-208	ENST00000504489	UBFD1	O14562	309 aa	Known RBP	11.3	□□□□□ -0.6
PDLIM5-208	ENST00000504489	ALB	P02768	609 aa		11.3	□□□□□ -0.6
PDLIM5-208	ENST00000504489	ENO1	P06733	434 aa	Known RBP	11.3	□□□□□ -0.6
PDLIM5-208	ENST00000504489	CD63	P08962	238 aa		11.3	□□□□□ -0.6
PDLIM5-208	ENST00000504489	RAB40AL	P0C0E4	278 aa		11.3	□□□□□ -0.6
PDLIM5-208	ENST00000504489	PCNA	P12004	261 aa		11.3	□□□□□ -0.6
PDLIM5-208	ENST00000504489	ALOX12	P18054	663 aa		11.3	□□□□□ -0.6
PDLIM5-208	ENST00000504489	TCN2	P20062	427 aa		11.3	□□□□□ -0.6
PDLIM5-208	ENST00000504489	SERPINB5	P36952	375 aa		11.3	□□□□□ -0.6
PDLIM5-208	ENST00000504489	OR1D4	P47884	311 aa		11.3	□□□□□ -0.6
PDLIM5-208	ENST00000504489	AVPR1B	P47901	424 aa		11.3	□□□□□ -0.6
PDLIM5-208	ENST00000504489	SKP1	P63208	163 aa		11.3	□□□□□ -0.6
PDLIM5-208	ENST00000504489	PHEX	P78562	749 aa		11.3	□□□□□ -0.6
PDLIM5-208	ENST00000504489	GALNT1	Q10472	559 aa	Predicted RBP	11.3	□□□□□ -0.6
PDLIM5-208	ENST00000504489	TTMP	Q5BVD1	217 aa		11.3	□□□□□ -0.6
PDLIM5-208	ENST00000504489	TOR1AIP1	Q5JTV8	583 aa		11.3	□□□□□ -0.6
PDLIM5-208	ENST00000504489	FRG2	Q64ET8	278 aa		11.3	□□□□□ -0.6
PDLIM5-208	ENST00000504489	FAM198B	Q6UWH4	519 aa		11.3	□□□□□ -0.6
PDLIM5-208	ENST00000504489	LRRC69	Q6ZNQ3	347 aa		11.3	□□□□□ -0.6
PDLIM5-208	ENST00000504489	ABHD13	Q7L211	337 aa		11.3	□□□□□ -0.6
PDLIM5-208	ENST00000504489	OVCH1	Q7RTY7	1134 aa		11.3	□□□□□ -0.6
PDLIM5-208	ENST00000504489	SYVN1	Q86TM6	617 aa		11.3	□□□□□ -0.6
PDLIM5-208	ENST00000504489	NUDCD3	Q8IVD9	361 aa		11.3	□□□□□ -0.6
PDLIM5-208	ENST00000504489	SPACA3	Q8IXA5	215 aa		11.3	□□□□□ -0.6
PDLIM5-208	ENST00000504489	DTWD1	Q8N5C7	304 aa		11.3	□□□□□ -0.6
PDLIM5-208	ENST00000504489	HUS1B	Q8NHY5	278 aa		11.3	□□□□□ -0.6
PDLIM5-208	ENST00000504489	UTP15	Q8TED0	518 aa	Known RBP	11.3	□□□□□ -0.6
PDLIM5-208	ENST00000504489	AGAP11	Q8TF27	550 aa		11.3	□□□□□ -0.6
PDLIM5-208	ENST00000504489	CCT6B	Q92526	530 aa		11.3	□□□□□ -0.6
PDLIM5-208	ENST00000504489	GAL3ST3	Q96A11	431 aa		11.3	□□□□□ -0.6
PDLIM5-208	ENST00000504489	KIAA1143	Q96AT1	154 aa	Predicted RBP	11.3	□□□□□ -0.6
PDLIM5-208	ENST00000504489	FKBP10	Q96AY3	582 aa		11.3	□□□□□ -0.6
PDLIM5-208	ENST00000504489	MS4A6E	Q96DS6	147 aa		11.3	□□□□□ -0.6
PDLIM5-208	ENST00000504489	CMTM7	Q96FZ5	175 aa		11.3	□□□□□ -0.6
PDLIM5-208	ENST00000504489	FRG2B	Q96QU4	278 aa		11.3	□□□□□ -0.6
PDLIM5-208	ENST00000504489	CCNL2	Q96S94	520 aa	Predicted RBP	11.3	□□□□□ -0.6
PDLIM5-208	ENST00000504489	EFHD1	Q9BUP0	239 aa		11.3	□□□□□ -0.6
PDLIM5-208	ENST00000504489	GPR87	Q9BY21	358 aa		11.3	□□□□□ -0.6
PDLIM5-208	ENST00000504489	SLC29A3	Q9BZD2	475 aa		11.3	□□□□□ -0.6
PDLIM5-208	ENST00000504489	AICDA	Q9GZX7	198 aa		11.3	□□□□□ -0.6
PDLIM5-208	ENST00000504489	KLHL31	Q9H511	634 aa		11.3	□□□□□ -0.6
PDLIM5-208	ENST00000504489	GPN2	Q9H9Y4	310 aa	Predicted RBP	11.3	□□□□□ -0.6

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