RNA–Protein interactions for RNA: ENST00000504396.1

DHFR-202, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-202ENST00000504396 PNLIPRP1P54315 467 aa8.53□□□□□ -1.04
DHFR-202ENST00000504396 CRADDP78560 199 aa8.53□□□□□ -1.04
DHFR-202ENST00000504396 ABATP80404 500 aa8.53□□□□□ -1.04
DHFR-202ENST00000504396 PCID2Q5JVF3 399 aa8.53□□□□□ -1.04
DHFR-202ENST00000504396 RNF187Q5TA31 235 aaPredicted RBP8.53□□□□□ -1.04
DHFR-202ENST00000504396 PAPD4Q6PIY7 484 aaKnown RBP8.53□□□□□ -1.04
DHFR-202ENST00000504396 CEP128Q6ZU80 1094 aa8.53□□□□□ -1.04
DHFR-202ENST00000504396 PEX26Q7Z412 305 aa8.53□□□□□ -1.04
DHFR-202ENST00000504396 ANKRD37Q7Z713 158 aa8.53□□□□□ -1.04
DHFR-202ENST00000504396 SYCE1Q8N0S2 351 aa8.53□□□□□ -1.04
DHFR-202ENST00000504396 AGGF1Q8N302 714 aaeCLIP8.53□□□□□ -1.045e-13■■■□□ 18.9
DHFR-202ENST00000504396 CCDC89Q8N998 374 aa8.53□□□□□ -1.04
DHFR-202ENST00000504396 LRRC57Q8N9N7 239 aa8.53□□□□□ -1.04
DHFR-202ENST00000504396 RNF214Q8ND24 703 aa8.53□□□□□ -1.04
DHFR-202ENST00000504396 OR51Q1Q8NH59 317 aa8.53□□□□□ -1.04
DHFR-202ENST00000504396 PHF10Q8WUB8 498 aaKnown RBP8.53□□□□□ -1.04
DHFR-202ENST00000504396 OR2A5Q96R48 311 aa8.53□□□□□ -1.04
DHFR-202ENST00000504396 CYTH2Q99418 400 aa8.53□□□□□ -1.04
DHFR-202ENST00000504396 VKORC1Q9BQB6 163 aa8.53□□□□□ -1.04
DHFR-202ENST00000504396 ADAM19Q9H013 955 aa8.53□□□□□ -1.04
DHFR-202ENST00000504396 CHRAC1Q9NRG0 131 aa8.53□□□□□ -1.04
DHFR-202ENST00000504396 LRFN1Q9P244 771 aa8.53□□□□□ -1.04
DHFR-202ENST00000504396 AMFRQ9UKV5 643 aa8.53□□□□□ -1.04
DHFR-202ENST00000504396 PACSIN2Q9UNF0 486 aaPredicted RBP8.53□□□□□ -1.04
DHFR-202ENST00000504396 DUSP10Q9Y6W6 482 aa8.53□□□□□ -1.04
DHFR-202ENST00000504396 DCHS2Q6V1P9 2916 aa8.53□□□□□ -1.04
DHFR-202ENST00000504396 ASPDHA6ND91 283 aa8.52□□□□□ -1.05
DHFR-202ENST00000504396 GOLGA8KD6RF30 607 aa8.52□□□□□ -1.05
DHFR-202ENST00000504396 H0YIG0 161 aa8.52□□□□□ -1.05
DHFR-202ENST00000504396 GOLGA8TH3BQL2 631 aa8.52□□□□□ -1.05
DHFR-202ENST00000504396 SGK494L7N484 410 aa8.52□□□□□ -1.05
DHFR-202ENST00000504396 MYO1CO00159 1063 aa8.52□□□□□ -1.05
DHFR-202ENST00000504396 NDC80O14777 642 aa8.52□□□□□ -1.05
DHFR-202ENST00000504396 TFECO14948 347 aaPredicted RBP8.52□□□□□ -1.05
DHFR-202ENST00000504396 SP1P08047 785 aa8.52□□□□□ -1.05
DHFR-202ENST00000504396 ADARP55265 1226 aaKnown RBP8.52□□□□□ -1.05
DHFR-202ENST00000504396 PRDX1Q06830 199 aaKnown RBP8.52□□□□□ -1.05
DHFR-202ENST00000504396 MYBPHQ13203 477 aa8.52□□□□□ -1.05
DHFR-202ENST00000504396 PTK6Q13882 451 aa8.52□□□□□ -1.05
DHFR-202ENST00000504396 GBX1Q14549 363 aa8.52□□□□□ -1.05
DHFR-202ENST00000504396 ABRAXAS2Q15018 415 aa8.52□□□□□ -1.05
DHFR-202ENST00000504396 NSDHLQ15738 373 aa8.52□□□□□ -1.05
DHFR-202ENST00000504396 SFT2D3Q587I9 215 aa8.52□□□□□ -1.05
DHFR-202ENST00000504396 CTSL3PQ5NE16 218 aa8.52□□□□□ -1.05
DHFR-202ENST00000504396 ARMC3Q5W041 872 aa8.52□□□□□ -1.05
DHFR-202ENST00000504396 ZNF425Q6IV72 752 aa8.52□□□□□ -1.05
DHFR-202ENST00000504396 SLC25A25Q6KCM7 469 aa8.52□□□□□ -1.05
DHFR-202ENST00000504396 H3F3CQ6NXT2 135 aa8.52□□□□□ -1.05
DHFR-202ENST00000504396 PRSS41Q7RTY9 318 aa8.52□□□□□ -1.05
DHFR-202ENST00000504396 PCGF5Q86SE9 256 aa8.52□□□□□ -1.05
DHFR-202ENST00000504396 SDCCAG8Q86SQ7 713 aaPredicted RBP8.52□□□□□ -1.05
DHFR-202ENST00000504396 DOLPP1Q86YN1 238 aa8.52□□□□□ -1.05
DHFR-202ENST00000504396 LGI4Q8N135 537 aa8.52□□□□□ -1.05
DHFR-202ENST00000504396 TXLNBQ8N3L3 684 aa8.52□□□□□ -1.05
DHFR-202ENST00000504396 ARHGEF39Q8N4T4 335 aa8.52□□□□□ -1.05
DHFR-202ENST00000504396 CPSF7Q8N684 471 aaKnown RBP8.52□□□□□ -1.05
DHFR-202ENST00000504396 TMEM125Q96AQ2 219 aa8.52□□□□□ -1.05
DHFR-202ENST00000504396 SCMH1Q96GD3 660 aa8.52□□□□□ -1.05
DHFR-202ENST00000504396 TCF12Q99081 682 aa8.52□□□□□ -1.05
DHFR-202ENST00000504396 PKP4Q99569 1192 aa8.52□□□□□ -1.05
DHFR-202ENST00000504396 LPAR4Q99677 370 aa8.52□□□□□ -1.05
DHFR-202ENST00000504396 EBNA1BP2Q99848 306 aaKnown RBP8.52□□□□□ -1.05
DHFR-202ENST00000504396 MACROD1Q9BQ69 325 aa8.52□□□□□ -1.05
DHFR-202ENST00000504396 ZNF559Q9BR84 538 aa8.52□□□□□ -1.05
DHFR-202ENST00000504396 ENKD1Q9H0I2 346 aa8.52□□□□□ -1.05
DHFR-202ENST00000504396 CDCP1Q9H5V8 836 aa8.52□□□□□ -1.05
DHFR-202ENST00000504396 ANKHQ9HCJ1 492 aa8.52□□□□□ -1.05
DHFR-202ENST00000504396 EIF2B3Q9NR50 452 aaKnown RBP8.52□□□□□ -1.05
DHFR-202ENST00000504396 CRYL1Q9Y2S2 319 aa8.52□□□□□ -1.05
DHFR-202ENST00000504396 EPN1Q9Y6I3 576 aaPredicted RBP8.52□□□□□ -1.05
DHFR-202ENST00000504396 HIVEP1P15822 2718 aa8.52□□□□□ -1.05
DHFR-202ENST00000504396 GTF3C1Q12789 2109 aa8.51□□□□□ -1.05
DHFR-202ENST00000504396 TCRBV7S2A1N4TA0A589 114 aa8.51□□□□□ -1.05
DHFR-202ENST00000504396 GRID2IPA4D2P6 1211 aa8.51□□□□□ -1.05
DHFR-202ENST00000504396 NKX2-6A6NCS4 301 aa8.51□□□□□ -1.05
DHFR-202ENST00000504396 ZNF860A6NHJ4 632 aa8.51□□□□□ -1.05
DHFR-202ENST00000504396 FOXO6A8MYZ6 492 aa8.51□□□□□ -1.05
DHFR-202ENST00000504396 H7BY64 318 aa8.51□□□□□ -1.05
DHFR-202ENST00000504396 RDH16O75452 317 aa8.51□□□□□ -1.05
DHFR-202ENST00000504396 PSIP1O75475 530 aaKnown RBP8.51□□□□□ -1.05
DHFR-202ENST00000504396 NSA2O95478 260 aaKnown RBP8.51□□□□□ -1.05
DHFR-202ENST00000504396 SLC16A8O95907 504 aa8.51□□□□□ -1.05
DHFR-202ENST00000504396 FTCDO95954 541 aa8.51□□□□□ -1.05
DHFR-202ENST00000504396 ESR1P03372 595 aa8.51□□□□□ -1.05
DHFR-202ENST00000504396 H2AFB1P0C5Y9 115 aa8.51□□□□□ -1.05
DHFR-202ENST00000504396 H2AFB2P0C5Z0 115 aa8.51□□□□□ -1.05
DHFR-202ENST00000504396 CD99P14209 185 aa8.51□□□□□ -1.05
DHFR-202ENST00000504396 ETS1P14921 441 aa8.51□□□□□ -1.05
DHFR-202ENST00000504396 HRH2P25021 359 aa8.51□□□□□ -1.05
DHFR-202ENST00000504396 PTGER1P34995 402 aa8.51□□□□□ -1.05
DHFR-202ENST00000504396 RFC3P40938 356 aa8.51□□□□□ -1.05
DHFR-202ENST00000504396 OR4D2P58180 307 aa8.51□□□□□ -1.05
DHFR-202ENST00000504396 SNX1Q13596 522 aa8.51□□□□□ -1.05
DHFR-202ENST00000504396 OASLQ15646 514 aaKnown RBP8.51□□□□□ -1.05
DHFR-202ENST00000504396 KLHL38Q2WGJ6 581 aa8.51□□□□□ -1.05
DHFR-202ENST00000504396 ACSBG2Q5FVE4 666 aa8.51□□□□□ -1.05
DHFR-202ENST00000504396 MRNIPQ6NTE8 343 aa8.51□□□□□ -1.05
DHFR-202ENST00000504396 C4orf22Q6V702 233 aa8.51□□□□□ -1.05
DHFR-202ENST00000504396 KIAA1328Q86T90 577 aa8.51□□□□□ -1.05
DHFR-202ENST00000504396 PRUNE1Q86TP1 453 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms