RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 HMGB1P1B2RPK0 211 aaPredicted RBP1.97□□□□□ -2.09
SMAD1-203ENST00000502342 H3BMM5 538 aa1.97□□□□□ -2.09
SMAD1-203ENST00000502342 UBE2CO00762 179 aa1.97□□□□□ -2.09
SMAD1-203ENST00000502342 PHOX2AO14813 284 aa1.97□□□□□ -2.09
SMAD1-203ENST00000502342 INPP4BO15327 924 aa1.97□□□□□ -2.09
SMAD1-203ENST00000502342 FIBPO43427 364 aa1.97□□□□□ -2.09
SMAD1-203ENST00000502342 TBX10O75333 385 aa1.97□□□□□ -2.09
SMAD1-203ENST00000502342 MT-ND2P03891 347 aa1.97□□□□□ -2.09
SMAD1-203ENST00000502342 SPP1P10451 314 aa1.97□□□□□ -2.09
SMAD1-203ENST00000502342 EEF2P13639 858 aaKnown RBP1.97□□□□□ -2.09
SMAD1-203ENST00000502342 FOLR2P14207 255 aa1.97□□□□□ -2.09
SMAD1-203ENST00000502342 FDPSP14324 419 aaKnown RBP1.97□□□□□ -2.09
SMAD1-203ENST00000502342 PDGFRAP16234 1089 aa1.97□□□□□ -2.09
SMAD1-203ENST00000502342 SELEP16581 610 aa1.97□□□□□ -2.09
SMAD1-203ENST00000502342 GOT1P17174 413 aa1.97□□□□□ -2.09
SMAD1-203ENST00000502342 AZU1P20160 251 aa1.97□□□□□ -2.09
SMAD1-203ENST00000502342 CTNNA2P26232 953 aa1.97□□□□□ -2.09
SMAD1-203ENST00000502342 RIDAP52758 137 aaKnown RBP1.97□□□□□ -2.09
SMAD1-203ENST00000502342 FAM174BQ3ZCQ3 159 aa1.97□□□□□ -2.09
SMAD1-203ENST00000502342 LRRC37A5PQ49AS3 106 aa1.97□□□□□ -2.09
SMAD1-203ENST00000502342 ZRANB3Q5FWF4 1079 aa1.97□□□□□ -2.09
SMAD1-203ENST00000502342 KRBOX4Q5JUW0 171 aa1.97□□□□□ -2.09
SMAD1-203ENST00000502342 FAM182AQ5T1J6 154 aa1.97□□□□□ -2.09
SMAD1-203ENST00000502342 DDX59Q5T1V6 619 aaKnown RBP eCLIP1.97□□□□□ -2.09
SMAD1-203ENST00000502342 LCE3EQ5T5B0 92 aa1.97□□□□□ -2.09
SMAD1-203ENST00000502342 SUSD4Q5VX71 490 aa1.97□□□□□ -2.09
SMAD1-203ENST00000502342 C16orf54Q6UWD8 224 aa1.97□□□□□ -2.09
SMAD1-203ENST00000502342 Q71RC1 249 aaPredicted RBP1.97□□□□□ -2.09
SMAD1-203ENST00000502342 KRT74Q7RTS7 529 aa1.97□□□□□ -2.09
SMAD1-203ENST00000502342 ANKRD33Q7Z3H0 272 aa1.97□□□□□ -2.09
SMAD1-203ENST00000502342 SPATA21Q7Z572 469 aa1.97□□□□□ -2.09
SMAD1-203ENST00000502342 PCGF5Q86SE9 256 aa1.97□□□□□ -2.09
SMAD1-203ENST00000502342 PHLDB2Q86SQ0 1253 aa1.97□□□□□ -2.09
SMAD1-203ENST00000502342 ZNF584Q8IVC4 421 aa1.97□□□□□ -2.09
SMAD1-203ENST00000502342 CCAR2Q8N163 923 aaKnown RBP1.97□□□□□ -2.09
SMAD1-203ENST00000502342 CCDC191Q8NCU4 936 aa1.97□□□□□ -2.09
SMAD1-203ENST00000502342 OR5M9Q8NGP3 310 aa1.97□□□□□ -2.09
SMAD1-203ENST00000502342 KIF18AQ8NI77 898 aa1.97□□□□□ -2.09
SMAD1-203ENST00000502342 P2RX5Q93086 422 aa1.97□□□□□ -2.09
SMAD1-203ENST00000502342 AK8Q96MA6 479 aa1.97□□□□□ -2.09
SMAD1-203ENST00000502342 ALKBH7Q9BT30 221 aaPredicted RBP1.97□□□□□ -2.09
SMAD1-203ENST00000502342 PAPOLGQ9BWT3 736 aaKnown RBP1.97□□□□□ -2.09
SMAD1-203ENST00000502342 KRTAP4-4Q9BYR3 166 aa1.97□□□□□ -2.09
SMAD1-203ENST00000502342 LRRCC1Q9C099 1032 aa1.97□□□□□ -2.09
SMAD1-203ENST00000502342 STRADBQ9C0K7 418 aa1.97□□□□□ -2.09
SMAD1-203ENST00000502342 DPEP2Q9H4A9 486 aa1.97□□□□□ -2.09
SMAD1-203ENST00000502342 ST6GALNAC4Q9H4F1 302 aa1.97□□□□□ -2.09
SMAD1-203ENST00000502342 C5AR2Q9P296 337 aa1.97□□□□□ -2.09
SMAD1-203ENST00000502342 GMEB2Q9UKD1 530 aa1.97□□□□□ -2.09
SMAD1-203ENST00000502342 CCL27Q9Y4X3 112 aa1.97□□□□□ -2.09
SMAD1-203ENST00000502342 LIPGQ9Y5X9 500 aa1.97□□□□□ -2.09
SMAD1-203ENST00000502342 AUP1Q9Y679 476 aa1.97□□□□□ -2.09
SMAD1-203ENST00000502342 KAT6BQ8WYB5 2073 aa1.97□□□□□ -2.09
SMAD1-203ENST00000502342 IGHV3-20A0A0C4DH32 117 aa1.96□□□□□ -2.1
SMAD1-203ENST00000502342 TRIM49BA6NDI0 452 aa1.96□□□□□ -2.1
SMAD1-203ENST00000502342 ARHGEF33A8MVX0 844 aa1.96□□□□□ -2.1
SMAD1-203ENST00000502342 PRSS46E5RG02 174 aa1.96□□□□□ -2.1
SMAD1-203ENST00000502342 ZNF749O43361 778 aa1.96□□□□□ -2.1
SMAD1-203ENST00000502342 TNFSF12O43508 249 aa1.96□□□□□ -2.1
SMAD1-203ENST00000502342 EIF5BO60841 1220 aaKnown RBP1.96□□□□□ -2.1
SMAD1-203ENST00000502342 PGLSO95336 258 aa1.96□□□□□ -2.1
SMAD1-203ENST00000502342 CD59P13987 128 aa1.96□□□□□ -2.1
SMAD1-203ENST00000502342 BCL3P20749 454 aa1.96□□□□□ -2.1
SMAD1-203ENST00000502342 FEN1P39748 380 aaKnown RBP1.96□□□□□ -2.1
SMAD1-203ENST00000502342 CRKLP46109 303 aaKnown RBP1.96□□□□□ -2.1
SMAD1-203ENST00000502342 KHKP50053 298 aa1.96□□□□□ -2.1
SMAD1-203ENST00000502342 SRPXP78539 464 aa1.96□□□□□ -2.1
SMAD1-203ENST00000502342 NUCB1Q02818 461 aa1.96□□□□□ -2.1
SMAD1-203ENST00000502342 TNK1Q13470 666 aa1.96□□□□□ -2.1
SMAD1-203ENST00000502342 ITPK1Q13572 414 aa1.96□□□□□ -2.1
SMAD1-203ENST00000502342 GCKRQ14397 625 aa1.96□□□□□ -2.1
SMAD1-203ENST00000502342 ZNF273Q14593 569 aa1.96□□□□□ -2.1
SMAD1-203ENST00000502342 UGCGQ16739 394 aa1.96□□□□□ -2.1
SMAD1-203ENST00000502342 UPP1Q16831 310 aa1.96□□□□□ -2.1
SMAD1-203ENST00000502342 C1orf141Q5JVX7 400 aa1.96□□□□□ -2.1
SMAD1-203ENST00000502342 SPANXN4Q5MJ08 99 aa1.96□□□□□ -2.1
SMAD1-203ENST00000502342 C6orf136Q5SQH8 315 aa1.96□□□□□ -2.1
SMAD1-203ENST00000502342 AGAP7PQ5VUJ5 663 aa1.96□□□□□ -2.1
SMAD1-203ENST00000502342 KRTAP5-4Q6L8H1 288 aa1.96□□□□□ -2.1
SMAD1-203ENST00000502342 ERN2Q76MJ5 926 aaKnown RBP1.96□□□□□ -2.1
SMAD1-203ENST00000502342 CCDC186Q7Z3E2 898 aa1.96□□□□□ -2.1
SMAD1-203ENST00000502342 TRMT11Q7Z4G4 463 aaKnown RBP1.96□□□□□ -2.1
SMAD1-203ENST00000502342 ABI3BPQ7Z7G0 1075 aa1.96□□□□□ -2.1
SMAD1-203ENST00000502342 KCNMB4Q86W47 210 aa1.96□□□□□ -2.1
SMAD1-203ENST00000502342 PHC2Q8IXK0 858 aa1.96□□□□□ -2.1
SMAD1-203ENST00000502342 GPD1LQ8N335 351 aa1.96□□□□□ -2.1
SMAD1-203ENST00000502342 LSMEM1Q8N8F7 131 aa1.96□□□□□ -2.1
SMAD1-203ENST00000502342 C4orf32Q8N8J7 132 aa1.96□□□□□ -2.1
SMAD1-203ENST00000502342 SUMF1Q8NBK3 374 aa1.96□□□□□ -2.1
SMAD1-203ENST00000502342 SSC4DQ8WTU2 575 aa1.96□□□□□ -2.1
SMAD1-203ENST00000502342 SIPA1Q96FS4 1042 aa1.96□□□□□ -2.1
SMAD1-203ENST00000502342 RBM24Q9BX46 236 aaKnown RBP1.96□□□□□ -2.1
SMAD1-203ENST00000502342 IL1RAPQ9NPH3 570 aa1.96□□□□□ -2.1
SMAD1-203ENST00000502342 PDRG1Q9NUG6 133 aa1.96□□□□□ -2.1
SMAD1-203ENST00000502342 SATB2Q9UPW6 733 aa1.96□□□□□ -2.1
SMAD1-203ENST00000502342 MRPS18CQ9Y3D5 142 aaKnown RBP1.96□□□□□ -2.1
SMAD1-203ENST00000502342 TRGV8A0A0C4DH27 118 aa1.95□□□□□ -2.1
SMAD1-203ENST00000502342 ZNF840PA6NDX5 716 aa1.95□□□□□ -2.1
SMAD1-203ENST00000502342 SERINC4A6NH21 518 aa1.95□□□□□ -2.1
SMAD1-203ENST00000502342 SHISA7A6NL88 538 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms