RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 ERAP2Q6P179 960 aa9.47□□□□□ -0.89
CLIP1-204ENST00000501271 NLRP8Q86W28 1048 aa9.47□□□□□ -0.89
CLIP1-204ENST00000501271 C12orf40Q86WS4 652 aa9.47□□□□□ -0.89
CLIP1-204ENST00000501271 CFAP206Q8IYR0 622 aa9.47□□□□□ -0.89
CLIP1-204ENST00000501271 ENTHD1Q8IYW4 607 aa9.47□□□□□ -0.89
CLIP1-204ENST00000501271 CENPSQ8N2Z9 138 aa9.47□□□□□ -0.89
CLIP1-204ENST00000501271 C11orf65Q8NCR3 313 aa9.47□□□□□ -0.89
CLIP1-204ENST00000501271 WDR48Q8TAF3 677 aa9.47□□□□□ -0.89
CLIP1-204ENST00000501271 ING5Q8WYH8 240 aa9.47□□□□□ -0.89
CLIP1-204ENST00000501271 DTD2Q96FN9 168 aa9.47□□□□□ -0.89
CLIP1-204ENST00000501271 SH3YL1Q96HL8 342 aaPredicted RBP9.47□□□□□ -0.89
CLIP1-204ENST00000501271 COX4I2Q96KJ9 171 aa9.47□□□□□ -0.89
CLIP1-204ENST00000501271 TMEM121BQ9BXQ6 578 aaPredicted RBP9.47□□□□□ -0.89
CLIP1-204ENST00000501271 GABARAPL3Q9BY60 117 aa9.47□□□□□ -0.89
CLIP1-204ENST00000501271 OR51B5Q9H339 312 aa9.47□□□□□ -0.89
CLIP1-204ENST00000501271 REEP4Q9H6H4 257 aa9.47□□□□□ -0.89
CLIP1-204ENST00000501271 ACOT13Q9NPJ3 140 aa9.47□□□□□ -0.89
CLIP1-204ENST00000501271 DMRT3Q9NQL9 472 aa9.47□□□□□ -0.89
CLIP1-204ENST00000501271 ATP6V1HQ9UI12 483 aa9.47□□□□□ -0.89
CLIP1-204ENST00000501271 TESMINQ9Y4I5 508 aa9.47□□□□□ -0.89
CLIP1-204ENST00000501271 PCDHGA6Q9Y5G7 932 aa9.47□□□□□ -0.89
CLIP1-204ENST00000501271 PIPSLA2A3N6 862 aa9.46□□□□□ -0.89
CLIP1-204ENST00000501271 TNFRSF21O75509 655 aa9.46□□□□□ -0.89
CLIP1-204ENST00000501271 SULT1C4O75897 302 aa9.46□□□□□ -0.89
CLIP1-204ENST00000501271 KLHL18O94889 574 aa9.46□□□□□ -0.89
CLIP1-204ENST00000501271 TIMP1P01033 207 aa9.46□□□□□ -0.89
CLIP1-204ENST00000501271 TGFB1P01137 390 aa9.46□□□□□ -0.89
CLIP1-204ENST00000501271 HLA-EP13747 358 aa9.46□□□□□ -0.89
CLIP1-204ENST00000501271 VBP1P61758 197 aa9.46□□□□□ -0.89
CLIP1-204ENST00000501271 SELENOWP63302 87 aa9.46□□□□□ -0.89
CLIP1-204ENST00000501271 PHEXP78562 749 aa9.46□□□□□ -0.89
CLIP1-204ENST00000501271 MESP2Q0VG99 397 aa9.46□□□□□ -0.89
CLIP1-204ENST00000501271 TEAD4Q15561 434 aa9.46□□□□□ -0.89
CLIP1-204ENST00000501271 LRRC26Q2I0M4 334 aa9.46□□□□□ -0.89
CLIP1-204ENST00000501271 PRSS53Q2L4Q9 553 aa9.46□□□□□ -0.89
CLIP1-204ENST00000501271 PROX2Q3B8N5 592 aa9.46□□□□□ -0.89
CLIP1-204ENST00000501271 IER5LQ5T953 404 aa9.46□□□□□ -0.89
CLIP1-204ENST00000501271 GPR153Q6NV75 609 aa9.46□□□□□ -0.89
CLIP1-204ENST00000501271 AHSA2Q719I0 299 aa9.46□□□□□ -0.89
CLIP1-204ENST00000501271 SLCO6A1Q86UG4 719 aa9.46□□□□□ -0.89
CLIP1-204ENST00000501271 P2RY8Q86VZ1 359 aa9.46□□□□□ -0.89
CLIP1-204ENST00000501271 TRAPPC5Q8IUR0 188 aa9.46□□□□□ -0.89
CLIP1-204ENST00000501271 SPPL2AQ8TCT8 520 aa9.46□□□□□ -0.89
CLIP1-204ENST00000501271 DNASE1L2Q92874 299 aa9.46□□□□□ -0.89
CLIP1-204ENST00000501271 COQ10AQ96MF6 247 aa9.46□□□□□ -0.89
CLIP1-204ENST00000501271 LRRC3BQ96PB8 259 aa9.46□□□□□ -0.89
CLIP1-204ENST00000501271 KCNC2Q96PR1 638 aa9.46□□□□□ -0.89
CLIP1-204ENST00000501271 ZNF300Q96RE9 604 aaPredicted RBP9.46□□□□□ -0.89
CLIP1-204ENST00000501271 SIGLEC11Q96RL6 698 aa9.46□□□□□ -0.89
CLIP1-204ENST00000501271 SLC35A5Q9BS91 424 aa9.46□□□□□ -0.89
CLIP1-204ENST00000501271 ALOXE3Q9BYJ1 711 aa9.46□□□□□ -0.89
CLIP1-204ENST00000501271 BHLHE41Q9C0J9 482 aaPredicted RBP9.46□□□□□ -0.89
CLIP1-204ENST00000501271 OR2AG1Q9H205 316 aa9.46□□□□□ -0.89
CLIP1-204ENST00000501271 RUBCNLQ9H714 662 aa9.46□□□□□ -0.89
CLIP1-204ENST00000501271 NDUFAF4Q9P032 175 aa9.46□□□□□ -0.89
CLIP1-204ENST00000501271 MAPRE3Q9UPY8 281 aa9.46□□□□□ -0.89
CLIP1-204ENST00000501271 ERGIC3Q9Y282 383 aa9.46□□□□□ -0.89
CLIP1-204ENST00000501271 LYVE1Q9Y5Y7 322 aa9.46□□□□□ -0.89
CLIP1-204ENST00000501271 PRAMEF25A6NGN4 478 aa9.46□□□□□ -0.9
CLIP1-204ENST00000501271 SLC22A1O15245 554 aa9.46□□□□□ -0.9
CLIP1-204ENST00000501271 EFCAB14O75071 495 aa9.46□□□□□ -0.9
CLIP1-204ENST00000501271 VIPP01282 170 aa9.46□□□□□ -0.9
CLIP1-204ENST00000501271 LCKP06239 509 aa9.46□□□□□ -0.9
CLIP1-204ENST00000501271 FURINP09958 794 aa9.46□□□□□ -0.9
CLIP1-204ENST00000501271 OCM2P0CE71 109 aa9.46□□□□□ -0.9
CLIP1-204ENST00000501271 OCMP0CE72 109 aaPredicted RBP9.46□□□□□ -0.9
CLIP1-204ENST00000501271 MAPK9P45984 424 aa9.46□□□□□ -0.9
CLIP1-204ENST00000501271 OR1E2P47887 323 aa9.46□□□□□ -0.9
CLIP1-204ENST00000501271 DGKGP49619 791 aa9.46□□□□□ -0.9
CLIP1-204ENST00000501271 BCL7AQ4VC05 210 aa9.46□□□□□ -0.9
CLIP1-204ENST00000501271 PRSS36Q5K4E3 855 aa9.46□□□□□ -0.9
CLIP1-204ENST00000501271 LAS2Q8IYD9 372 aa9.46□□□□□ -0.9
CLIP1-204ENST00000501271 LRRC56Q8IYG6 542 aaPredicted RBP9.46□□□□□ -0.9
CLIP1-204ENST00000501271 NRSN1Q8IZ57 195 aa9.46□□□□□ -0.9
CLIP1-204ENST00000501271 TMCO5AQ8N6Q1 288 aa9.46□□□□□ -0.9
CLIP1-204ENST00000501271 FBXO15Q8NCQ5 510 aaPredicted RBP9.46□□□□□ -0.9
CLIP1-204ENST00000501271 GOT1L1Q8NHS2 421 aaPredicted RBP9.46□□□□□ -0.9
CLIP1-204ENST00000501271 CHPT1Q8WUD6 406 aa9.46□□□□□ -0.9
CLIP1-204ENST00000501271 TAMM41Q96BW9 452 aa9.46□□□□□ -0.9
CLIP1-204ENST00000501271 PPP1R14BQ96C90 147 aa9.46□□□□□ -0.9
CLIP1-204ENST00000501271 REPS1Q96D71 796 aa9.46□□□□□ -0.9
CLIP1-204ENST00000501271 CXorf40BQ96DE9 158 aa9.46□□□□□ -0.9
CLIP1-204ENST00000501271 WDR34Q96EX3 536 aa9.46□□□□□ -0.9
CLIP1-204ENST00000501271 LRIG1Q96JA1 1093 aa9.46□□□□□ -0.9
CLIP1-204ENST00000501271 HRASLS5Q96KN8 279 aa9.46□□□□□ -0.9
CLIP1-204ENST00000501271 ZNF347Q96SE7 839 aa9.46□□□□□ -0.9
CLIP1-204ENST00000501271 BCL7BQ9BQE9 202 aa9.46□□□□□ -0.9
CLIP1-204ENST00000501271 SGPP1Q9BX95 441 aa9.46□□□□□ -0.9
CLIP1-204ENST00000501271 CRISPLD2Q9H0B8 497 aa9.46□□□□□ -0.9
CLIP1-204ENST00000501271 AKIP1Q9NQ31 210 aa9.46□□□□□ -0.9
CLIP1-204ENST00000501271 RNF6Q9Y252 685 aa9.46□□□□□ -0.9
CLIP1-204ENST00000501271 PCDHGB3Q9Y5G1 929 aa9.46□□□□□ -0.9
CLIP1-204ENST00000501271 IRAK3Q9Y616 596 aa9.46□□□□□ -0.9
CLIP1-204ENST00000501271 ZBBXA8MT70 800 aa9.45□□□□□ -0.9
CLIP1-204ENST00000501271 TNFRSF11BO00300 401 aa9.45□□□□□ -0.9
CLIP1-204ENST00000501271 FOXE1O00358 373 aaPredicted RBP9.45□□□□□ -0.9
CLIP1-204ENST00000501271 PLK4O00444 970 aa9.45□□□□□ -0.9
CLIP1-204ENST00000501271 CBFA2T3O75081 653 aa9.45□□□□□ -0.9
CLIP1-204ENST00000501271 FGF19O95750 216 aa9.45□□□□□ -0.9
CLIP1-204ENST00000501271 FUCA1P04066 466 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms