RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 USP10Q14694 798 aaKnown RBP7.99□□□□□ -1.13
HMGXB4-207ENST00000498212 ABRAXAS2Q15018 415 aa7.99□□□□□ -1.13
HMGXB4-207ENST00000498212 RBBP5Q15291 538 aaKnown RBP7.99□□□□□ -1.13
HMGXB4-207ENST00000498212 TGFBIQ15582 683 aa7.99□□□□□ -1.13
HMGXB4-207ENST00000498212 DEFB134Q4QY38 66 aa7.99□□□□□ -1.13
HMGXB4-207ENST00000498212 ABHD17BQ5VST6 288 aa7.99□□□□□ -1.13
HMGXB4-207ENST00000498212 PLAG1Q6DJT9 500 aa7.99□□□□□ -1.13
HMGXB4-207ENST00000498212 NXPE4Q6UWF7 544 aa7.99□□□□□ -1.13
HMGXB4-207ENST00000498212 FAM180AQ6UWF9 173 aa7.99□□□□□ -1.13
HMGXB4-207ENST00000498212 CYS1Q717R9 158 aa7.99□□□□□ -1.13
HMGXB4-207ENST00000498212 CCDC25Q86WR0 208 aa7.99□□□□□ -1.13
HMGXB4-207ENST00000498212 CTAGE3PQ8IX95 158 aa7.99□□□□□ -1.13
HMGXB4-207ENST00000498212 KLHDC8AQ8IYD2 350 aa7.99□□□□□ -1.13
HMGXB4-207ENST00000498212 SPATA6LQ8N4H0 392 aa7.99□□□□□ -1.13
HMGXB4-207ENST00000498212 ANKRD53Q8N9V6 530 aa7.99□□□□□ -1.13
HMGXB4-207ENST00000498212 ST6GALNAC3Q8NDV1 305 aa7.99□□□□□ -1.13
HMGXB4-207ENST00000498212 PLPP5Q8NEB5 264 aa7.99□□□□□ -1.13
HMGXB4-207ENST00000498212 OR5T3Q8NGG3 340 aa7.99□□□□□ -1.13
HMGXB4-207ENST00000498212 FBXO25Q8TCJ0 367 aa7.99□□□□□ -1.13
HMGXB4-207ENST00000498212 GRHL3Q8TE85 626 aa7.99□□□□□ -1.13
HMGXB4-207ENST00000498212 UTP15Q8TED0 518 aaKnown RBP7.99□□□□□ -1.13
HMGXB4-207ENST00000498212 FAR1Q8WVX9 515 aa7.99□□□□□ -1.13
HMGXB4-207ENST00000498212 RHBDF1Q96CC6 855 aa7.99□□□□□ -1.13
HMGXB4-207ENST00000498212 GPR22Q99680 433 aa7.99□□□□□ -1.13
HMGXB4-207ENST00000498212 UNKQ9C0B0 810 aaKnown RBP7.99□□□□□ -1.13
HMGXB4-207ENST00000498212 SLC6A16Q9GZN6 736 aa7.99□□□□□ -1.13
HMGXB4-207ENST00000498212 PLA2G3Q9NZ20 509 aa7.99□□□□□ -1.13
HMGXB4-207ENST00000498212 TEKT2Q9UIF3 430 aa7.99□□□□□ -1.13
HMGXB4-207ENST00000498212 MAGEB17A8MXT2 336 aa7.98□□□□□ -1.13
HMGXB4-207ENST00000498212 PHGDHO43175 533 aaKnown RBP7.98□□□□□ -1.13
HMGXB4-207ENST00000498212 CHST10O43529 356 aa7.98□□□□□ -1.13
HMGXB4-207ENST00000498212 H2AFYO75367 372 aaKnown RBP7.98□□□□□ -1.13
HMGXB4-207ENST00000498212 WDPCPO95876 746 aa7.98□□□□□ -1.13
HMGXB4-207ENST00000498212 B3GALT4O96024 378 aa7.98□□□□□ -1.13
HMGXB4-207ENST00000498212 F10P00742 488 aa7.98□□□□□ -1.13
HMGXB4-207ENST00000498212 FHP07954 510 aa7.98□□□□□ -1.13
HMGXB4-207ENST00000498212 SERPINA6P08185 405 aa7.98□□□□□ -1.13
HMGXB4-207ENST00000498212 C1GALT1C1LP0DN25 315 aa7.98□□□□□ -1.13
HMGXB4-207ENST00000498212 CD1DP15813 335 aa7.98□□□□□ -1.13
HMGXB4-207ENST00000498212 GNAZP19086 355 aa7.98□□□□□ -1.13
HMGXB4-207ENST00000498212 STX2P32856 288 aa7.98□□□□□ -1.13
HMGXB4-207ENST00000498212 SPRP35270 261 aaPredicted RBP7.98□□□□□ -1.13
HMGXB4-207ENST00000498212 HNF4AP41235 474 aa7.98□□□□□ -1.13
HMGXB4-207ENST00000498212 GDF5P43026 501 aa7.98□□□□□ -1.13
HMGXB4-207ENST00000498212 SLC6A12P48065 614 aa7.98□□□□□ -1.13
HMGXB4-207ENST00000498212 TNFSF10P50591 281 aa7.98□□□□□ -1.13
HMGXB4-207ENST00000498212 RAB8AP61006 207 aa7.98□□□□□ -1.13
HMGXB4-207ENST00000498212 ATP6V0D1P61421 351 aa7.98□□□□□ -1.13
HMGXB4-207ENST00000498212 OLR1P78380 273 aa7.98□□□□□ -1.13
HMGXB4-207ENST00000498212 ZNF33BQ06732 778 aa7.98□□□□□ -1.13
HMGXB4-207ENST00000498212 CKAP4Q07065 602 aaKnown RBP7.98□□□□□ -1.13
HMGXB4-207ENST00000498212 ACTN3Q08043 901 aaPredicted RBP7.98□□□□□ -1.13
HMGXB4-207ENST00000498212 HYAL2Q12891 473 aa7.98□□□□□ -1.13
HMGXB4-207ENST00000498212 NSDHLQ15738 373 aa7.98□□□□□ -1.13
HMGXB4-207ENST00000498212 INAQ16352 499 aa7.98□□□□□ -1.13
HMGXB4-207ENST00000498212 EXT1Q16394 746 aa7.98□□□□□ -1.13
HMGXB4-207ENST00000498212 C18orf21Q32NC0 220 aaPredicted RBP7.98□□□□□ -1.13
HMGXB4-207ENST00000498212 KBTBD12Q3ZCT8 623 aa7.98□□□□□ -1.13
HMGXB4-207ENST00000498212 SFT2D3Q587I9 215 aa7.98□□□□□ -1.13
HMGXB4-207ENST00000498212 TOR1AIP1Q5JTV8 583 aa7.98□□□□□ -1.13
HMGXB4-207ENST00000498212 GRTP1Q5TC63 336 aa7.98□□□□□ -1.13
HMGXB4-207ENST00000498212 PAPD4Q6PIY7 484 aaKnown RBP7.98□□□□□ -1.13
HMGXB4-207ENST00000498212 ZNF572Q7Z3I7 529 aaPredicted RBP7.98□□□□□ -1.13
HMGXB4-207ENST00000498212 TCAIMQ8N3R3 496 aa7.98□□□□□ -1.13
HMGXB4-207ENST00000498212 AMER2Q8N7J2 671 aa7.98□□□□□ -1.13
HMGXB4-207ENST00000498212 BCORP1Q8N888 145 aa7.98□□□□□ -1.13
HMGXB4-207ENST00000498212 TTLQ8NG68 377 aa7.98□□□□□ -1.13
HMGXB4-207ENST00000498212 SUN3Q8TAQ9 357 aa7.98□□□□□ -1.13
HMGXB4-207ENST00000498212 M1APQ8TC57 530 aa7.98□□□□□ -1.13
HMGXB4-207ENST00000498212 TSLPQ969D9 159 aa7.98□□□□□ -1.13
HMGXB4-207ENST00000498212 TBC1D20Q96BZ9 403 aa7.98□□□□□ -1.13
HMGXB4-207ENST00000498212 MAGEB10Q96LZ2 347 aaPredicted RBP7.98□□□□□ -1.13
HMGXB4-207ENST00000498212 KCNK17Q96T54 332 aa7.98□□□□□ -1.13
HMGXB4-207ENST00000498212 LPAR4Q99677 370 aa7.98□□□□□ -1.13
HMGXB4-207ENST00000498212 TMEM79Q9BSE2 394 aa7.98□□□□□ -1.13
HMGXB4-207ENST00000498212 CAPS2Q9BXY5 557 aa7.98□□□□□ -1.13
HMGXB4-207ENST00000498212 RNF32Q9H0A6 362 aa7.98□□□□□ -1.13
HMGXB4-207ENST00000498212 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.98□□□□□ -1.13
HMGXB4-207ENST00000498212 CNOT10Q9H9A5 744 aaKnown RBP7.98□□□□□ -1.13
HMGXB4-207ENST00000498212 KCNK13Q9HB14 408 aa7.98□□□□□ -1.13
HMGXB4-207ENST00000498212 LANCL2Q9NS86 450 aa7.98□□□□□ -1.13
HMGXB4-207ENST00000498212 STMN3Q9NZ72 180 aa7.98□□□□□ -1.13
HMGXB4-207ENST00000498212 WWOXQ9NZC7 414 aa7.98□□□□□ -1.13
HMGXB4-207ENST00000498212 GPRC5BQ9NZH0 403 aa7.98□□□□□ -1.13
HMGXB4-207ENST00000498212 SETXQ7Z333 2677 aaKnown RBP7.98□□□□□ -1.13
HMGXB4-207ENST00000498212 CNTRLQ7Z7A1 2325 aa7.97□□□□□ -1.13
HMGXB4-207ENST00000498212 COL12A1Q99715 3063 aa7.97□□□□□ -1.13
HMGXB4-207ENST00000498212 CTAGE15A4D2H0 777 aa7.97□□□□□ -1.13
HMGXB4-207ENST00000498212 OR5H15A6NDH6 313 aa7.97□□□□□ -1.13
HMGXB4-207ENST00000498212 A8MUI8 341 aa7.97□□□□□ -1.13
HMGXB4-207ENST00000498212 C4orf51C9J302 202 aa7.97□□□□□ -1.13
HMGXB4-207ENST00000498212 PSMD12O00232 456 aaPredicted RBP7.97□□□□□ -1.13
HMGXB4-207ENST00000498212 E2F3O00716 465 aa7.97□□□□□ -1.13
HMGXB4-207ENST00000498212 CLGNO14967 610 aa7.97□□□□□ -1.13
HMGXB4-207ENST00000498212 B4GALT2O60909 372 aa7.97□□□□□ -1.13
HMGXB4-207ENST00000498212 DNAJB6O75190 326 aa7.97□□□□□ -1.13
HMGXB4-207ENST00000498212 FAM155BO75949 473 aa7.97□□□□□ -1.13
HMGXB4-207ENST00000498212 DDAH2O95865 285 aa7.97□□□□□ -1.13
HMGXB4-207ENST00000498212 C1QAP02745 245 aa7.97□□□□□ -1.13
HMGXB4-207ENST00000498212 S100BP04271 92 aaPredicted RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms