RNA–Protein interactions for RNA: ENST00000496574.6

PKD1-222, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 4,419 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-222ENST00000496574 CH25HO95992 272 aa13.68□□□□□ -0.22
PKD1-222ENST00000496574 SLBPQ14493 270 aaKnown RBP eCLIP13.68□□□□□ -0.22
PKD1-222ENST00000496574 ZNF234Q14588 700 aa13.68□□□□□ -0.22
PKD1-222ENST00000496574 GINS1Q14691 196 aa13.68□□□□□ -0.22
PKD1-222ENST00000496574 CBX2Q14781 532 aaPredicted RBP13.68□□□□□ -0.22
PKD1-222ENST00000496574 VARS2Q5ST30 1063 aaKnown RBP13.68□□□□□ -0.22
PKD1-222ENST00000496574 UMODL1-AS1Q8N2C9 162 aa13.68□□□□□ -0.22
PKD1-222ENST00000496574 PARP16Q8N5Y8 322 aa13.68□□□□□ -0.22
PKD1-222ENST00000496574 SAMD12Q8N8I0 201 aa13.68□□□□□ -0.22
PKD1-222ENST00000496574 OR4K1Q8NGD4 311 aa13.68□□□□□ -0.22
PKD1-222ENST00000496574 IFT27Q9BW83 186 aa13.68□□□□□ -0.22
PKD1-222ENST00000496574 COQ3Q9NZJ6 369 aa13.68□□□□□ -0.22
PKD1-222ENST00000496574 TRAV19A0A0A6YYK7 116 aa13.68□□□□□ -0.22
PKD1-222ENST00000496574 SLC19A2O60779 497 aa13.68□□□□□ -0.22
PKD1-222ENST00000496574 TOXO94900 526 aa13.68□□□□□ -0.22
PKD1-222ENST00000496574 DSG2Q14126 1118 aa13.68□□□□□ -0.22
PKD1-222ENST00000496574 CYP27C1Q4G0S4 372 aa13.68□□□□□ -0.22
PKD1-222ENST00000496574 FAAH2Q6GMR7 532 aa13.68□□□□□ -0.22
PKD1-222ENST00000496574 OR7G1Q8NGA0 311 aa13.68□□□□□ -0.22
PKD1-222ENST00000496574 SOCS4Q8WXH5 440 aa13.68□□□□□ -0.22
PKD1-222ENST00000496574 DCAF13Q9NV06 445 aaKnown RBP13.68□□□□□ -0.22
PKD1-222ENST00000496574 EXOSC1Q9Y3B2 195 aaKnown RBP13.68□□□□□ -0.22
PKD1-222ENST00000496574 RGPD2P0DJD1 1756 aa13.68□□□□□ -0.22
PKD1-222ENST00000496574 A0A1W2PQL4 384 aaPredicted RBP13.68□□□□□ -0.22
PKD1-222ENST00000496574 TCRBV5S1A1TA0A578 114 aa13.68□□□□□ -0.22
PKD1-222ENST00000496574 ARL6IP5O75915 188 aa13.68□□□□□ -0.22
PKD1-222ENST00000496574 CBSLP0DN79 551 aa13.68□□□□□ -0.22
PKD1-222ENST00000496574 F8A1P23610 371 aa13.68□□□□□ -0.22
PKD1-222ENST00000496574 CBSP35520 551 aa13.68□□□□□ -0.22
PKD1-222ENST00000496574 MAP2K5Q13163 448 aa13.68□□□□□ -0.22
PKD1-222ENST00000496574 BCL7AQ4VC05 210 aa13.68□□□□□ -0.22
PKD1-222ENST00000496574 FNDC3BQ53EP0 1204 aaKnown RBP13.68□□□□□ -0.22
PKD1-222ENST00000496574 ZNF691Q5VV52 312 aa13.68□□□□□ -0.22
PKD1-222ENST00000496574 RD3Q7Z3Z2 195 aa13.68□□□□□ -0.22
PKD1-222ENST00000496574 TMIEQ8NEW7 156 aa13.68□□□□□ -0.22
PKD1-222ENST00000496574 SLC35C2Q9NQQ7 365 aa13.68□□□□□ -0.22
PKD1-222ENST00000496574 THG1LQ9NWX6 298 aaKnown RBP13.68□□□□□ -0.22
PKD1-222ENST00000496574 P2RX2Q9UBL9 471 aa13.68□□□□□ -0.22
PKD1-222ENST00000496574 A0A0X1KG70 313 aa13.67□□□□□ -0.22
PKD1-222ENST00000496574 HAPLN1P10915 354 aaPredicted RBP13.67□□□□□ -0.22
PKD1-222ENST00000496574 FGFBP1Q14512 234 aa13.67□□□□□ -0.22
PKD1-222ENST00000496574 USP41Q3LFD5 358 aa13.67□□□□□ -0.22
PKD1-222ENST00000496574 REEP3Q6NUK4 255 aa13.67□□□□□ -0.22
PKD1-222ENST00000496574 ANKRD54Q6NXT1 300 aa13.67□□□□□ -0.22
PKD1-222ENST00000496574 GDPGP1Q6ZNW5 385 aa13.67□□□□□ -0.22
PKD1-222ENST00000496574 SLC5A8Q8N695 610 aa13.67□□□□□ -0.22
PKD1-222ENST00000496574 C7orf57Q8NEG2 295 aa13.67□□□□□ -0.22
PKD1-222ENST00000496574 PIP5K1AQ99755 562 aa13.67□□□□□ -0.22
PKD1-222ENST00000496574 GON7Q9BXV9 100 aa13.67□□□□□ -0.22
PKD1-222ENST00000496574 GORASP2Q9H8Y8 452 aa13.67□□□□□ -0.22
PKD1-222ENST00000496574 TCF7L1Q9HCS4 588 aa13.67□□□□□ -0.22
PKD1-222ENST00000496574 PLCL2Q9UPR0 1127 aa13.67□□□□□ -0.22
PKD1-222ENST00000496574 CCDC88AQ3V6T2 1871 aa13.67□□□□□ -0.22
PKD1-222ENST00000496574 PHRF1Q9P1Y6 1649 aaKnown RBP13.67□□□□□ -0.22
PKD1-222ENST00000496574 PDCD5O14737 125 aa13.67□□□□□ -0.22
PKD1-222ENST00000496574 PI15O43692 258 aa13.67□□□□□ -0.22
PKD1-222ENST00000496574 PRAMEF12O95522 483 aa13.67□□□□□ -0.22
PKD1-222ENST00000496574 C6orf47O95873 294 aa13.67□□□□□ -0.22
PKD1-222ENST00000496574 KHKP50053 298 aa13.67□□□□□ -0.22
PKD1-222ENST00000496574 SLC3A1Q07837 685 aa13.67□□□□□ -0.22
PKD1-222ENST00000496574 OXA1LQ15070 435 aa13.67□□□□□ -0.22
PKD1-222ENST00000496574 TSC22D1Q15714 1073 aa13.67□□□□□ -0.22
PKD1-222ENST00000496574 PLA2G4EQ3MJ16 856 aa13.67□□□□□ -0.22
PKD1-222ENST00000496574 C4orf46Q504U0 113 aa13.67□□□□□ -0.22
PKD1-222ENST00000496574 ZNF648Q5T619 568 aaPredicted RBP13.67□□□□□ -0.22
PKD1-222ENST00000496574 FAM217AQ8IXS0 508 aa13.67□□□□□ -0.22
PKD1-222ENST00000496574 CDH7Q9ULB5 785 aa13.67□□□□□ -0.22
PKD1-222ENST00000496574 MKL2Q9ULH7 1088 aa13.67□□□□□ -0.22
PKD1-222ENST00000496574 SH3D21A4FU49 640 aa13.67□□□□□ -0.22
PKD1-222ENST00000496574 RBBP4Q09028 425 aa13.67□□□□□ -0.22
PKD1-222ENST00000496574 PTGES3Q15185 160 aaKnown RBP13.67□□□□□ -0.22
PKD1-222ENST00000496574 SF3B4Q15427 424 aaKnown RBP eCLIP13.67□□□□□ -0.224e-9■■■□□ 17.1
PKD1-222ENST00000496574 Q8N9G6 341 aaPredicted RBP13.67□□□□□ -0.22
PKD1-222ENST00000496574 RPLP0P6Q8NHW5 317 aa13.67□□□□□ -0.22
PKD1-222ENST00000496574 CXorf40AQ8TE69 158 aa13.67□□□□□ -0.22
PKD1-222ENST00000496574 DNAJA4Q8WW22 397 aaPredicted RBP13.67□□□□□ -0.22
PKD1-222ENST00000496574 PPP1R16AQ96I34 528 aa13.67□□□□□ -0.22
PKD1-222ENST00000496574 SNX18Q96RF0 628 aa13.67□□□□□ -0.22
PKD1-222ENST00000496574 OR10H1Q9Y4A9 318 aa13.67□□□□□ -0.22
PKD1-222ENST00000496574 CLDN24A6NM45 220 aa13.67□□□□□ -0.22
PKD1-222ENST00000496574 FAM170BA6NMN3 283 aa13.67□□□□□ -0.22
PKD1-222ENST00000496574 ARNTLO00327 626 aa13.67□□□□□ -0.22
PKD1-222ENST00000496574 FAM189BP81408 668 aa13.67□□□□□ -0.22
PKD1-222ENST00000496574 EIF4HQ15056 248 aaKnown RBP13.67□□□□□ -0.22
PKD1-222ENST00000496574 MPPE1Q53F39 396 aa13.67□□□□□ -0.22
PKD1-222ENST00000496574 TRNP1Q6NT89 227 aa13.67□□□□□ -0.22
PKD1-222ENST00000496574 SLC36A4Q6YBV0 504 aa13.67□□□□□ -0.22
PKD1-222ENST00000496574 RANBP3LQ86VV4 465 aaPredicted RBP13.67□□□□□ -0.22
PKD1-222ENST00000496574 RNF130Q86XS8 419 aa13.67□□□□□ -0.22
PKD1-222ENST00000496574 TMEM130Q8N3G9 435 aa13.67□□□□□ -0.22
PKD1-222ENST00000496574 SLC22A17Q8WUG5 538 aa13.67□□□□□ -0.22
PKD1-222ENST00000496574 UPF1Q92900 1129 aaKnown RBP eCLIP13.67□□□□□ -0.22
PKD1-222ENST00000496574 TTLL2Q9BWV7 592 aa13.67□□□□□ -0.22
PKD1-222ENST00000496574 PCDHB11Q9Y5F2 797 aa13.67□□□□□ -0.22
PKD1-222ENST00000496574 KANTRA0A1W2PQU2 76 aa13.66□□□□□ -0.22
PKD1-222ENST00000496574 OR10H2O60403 315 aa13.66□□□□□ -0.22
PKD1-222ENST00000496574 JUNBP17275 347 aaPredicted RBP13.66□□□□□ -0.22
PKD1-222ENST00000496574 AVPR1BP47901 424 aa13.66□□□□□ -0.22
PKD1-222ENST00000496574 GBX2P52951 348 aaPredicted RBP13.66□□□□□ -0.22
PKD1-222ENST00000496574 STEAP3Q658P3 488 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms