RNA–Protein interactions for RNA: ENST00000496049.1

GAPDH-210, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 2

Gene GAPDH, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-210ENST00000496049 RAP1GDS1P52306 607 aa14.32□□□□□ -0.12
GAPDH-210ENST00000496049 STXBP1P61764 594 aaKnown RBP14.32□□□□□ -0.12
GAPDH-210ENST00000496049 RPS13P62277 151 aaKnown RBP14.32□□□□□ -0.12
GAPDH-210ENST00000496049 GABPB1Q06547 395 aaPredicted RBP14.32□□□□□ -0.12
GAPDH-210ENST00000496049 SF3A3Q12874 501 aaKnown RBP eCLIP14.32□□□□□ -0.123e-7■■■□□ 18
GAPDH-210ENST00000496049 MAD2L1Q13257 205 aaPredicted RBP14.32□□□□□ -0.12
GAPDH-210ENST00000496049 TRA2AQ13595 282 aaKnown RBP eCLIP14.32□□□□□ -0.12
GAPDH-210ENST00000496049 PWP1Q13610 501 aa14.32□□□□□ -0.12
GAPDH-210ENST00000496049 SLC9B1Q4ZJI4 515 aa14.32□□□□□ -0.12
GAPDH-210ENST00000496049 TMEM35AQ53FP2 167 aa14.32□□□□□ -0.12
GAPDH-210ENST00000496049 SPIN4Q56A73 249 aa14.32□□□□□ -0.12
GAPDH-210ENST00000496049 SCIMPQ6UWF3 145 aa14.32□□□□□ -0.12
GAPDH-210ENST00000496049 CHSY3Q70JA7 882 aa14.32□□□□□ -0.12
GAPDH-210ENST00000496049 PIGWQ7Z7B1 504 aa14.32□□□□□ -0.12
GAPDH-210ENST00000496049 SLCO6A1Q86UG4 719 aa14.32□□□□□ -0.12
GAPDH-210ENST00000496049 PLD3Q8IV08 490 aa14.32□□□□□ -0.12
GAPDH-210ENST00000496049 ANKRD53Q8N9V6 530 aa14.32□□□□□ -0.12
GAPDH-210ENST00000496049 CAMKVQ8NCB2 501 aa14.32□□□□□ -0.12
GAPDH-210ENST00000496049 CEP70Q8NHQ1 597 aa14.32□□□□□ -0.12
GAPDH-210ENST00000496049 PRR11Q96HE9 360 aaPredicted RBP14.32□□□□□ -0.12
GAPDH-210ENST00000496049 METTL2AQ96IZ6 378 aaKnown RBP14.32□□□□□ -0.12
GAPDH-210ENST00000496049 MAELQ96JY0 434 aaKnown RBP14.32□□□□□ -0.12
GAPDH-210ENST00000496049 PPM1MQ96MI6 270 aa14.32□□□□□ -0.12
GAPDH-210ENST00000496049 ACPTQ9BZG2 426 aa14.32□□□□□ -0.12
GAPDH-210ENST00000496049 IRAK4Q9NWZ3 460 aa14.32□□□□□ -0.12
GAPDH-210ENST00000496049 AHSPQ9NZD4 102 aa14.32□□□□□ -0.12
GAPDH-210ENST00000496049 VPS29Q9UBQ0 182 aa14.32□□□□□ -0.12
GAPDH-210ENST00000496049 PTGDR2Q9Y5Y4 395 aa14.32□□□□□ -0.12
GAPDH-210ENST00000496049 HEATR5BQ9P2D3 2071 aa14.32□□□□□ -0.12
GAPDH-210ENST00000496049 IGHV5-51A0A0C4DH38 117 aa14.31□□□□□ -0.12
GAPDH-210ENST00000496049 ATP6AP2A0A1C7CYW4 349 aa14.31□□□□□ -0.12
GAPDH-210ENST00000496049 NTN3O00634 580 aaPredicted RBP14.31□□□□□ -0.12
GAPDH-210ENST00000496049 KIF1CO43896 1103 aaKnown RBP14.31□□□□□ -0.12
GAPDH-210ENST00000496049 CTSVO60911 334 aa14.31□□□□□ -0.12
GAPDH-210ENST00000496049 ATP6AP2O75787 350 aa14.31□□□□□ -0.12
GAPDH-210ENST00000496049 DCTN3O75935 186 aa14.31□□□□□ -0.12
GAPDH-210ENST00000496049 MYO1DO94832 1006 aa14.31□□□□□ -0.12
GAPDH-210ENST00000496049 SEMA3DO95025 777 aa14.31□□□□□ -0.12
GAPDH-210ENST00000496049 SERPINA6P08185 405 aa14.31□□□□□ -0.12
GAPDH-210ENST00000496049 THRAP10827 490 aa14.31□□□□□ -0.12
GAPDH-210ENST00000496049 LBPP18428 481 aa14.31□□□□□ -0.12
GAPDH-210ENST00000496049 IRX1P78414 480 aaPredicted RBP14.31□□□□□ -0.12
GAPDH-210ENST00000496049 ACSM2AQ08AH3 577 aa14.31□□□□□ -0.12
GAPDH-210ENST00000496049 CUL3Q13618 768 aa14.31□□□□□ -0.12
GAPDH-210ENST00000496049 SMU1Q2TAY7 513 aa14.31□□□□□ -0.12
GAPDH-210ENST00000496049 GALNTL6Q49A17 601 aa14.31□□□□□ -0.12
GAPDH-210ENST00000496049 CCDC157Q569K6 752 aa14.31□□□□□ -0.12
GAPDH-210ENST00000496049 PHF19Q5T6S3 580 aa14.31□□□□□ -0.12
GAPDH-210ENST00000496049 ACSM2BQ68CK6 577 aa14.31□□□□□ -0.12
GAPDH-210ENST00000496049 RBM44Q6ZP01 1051 aaKnown RBP14.31□□□□□ -0.12
GAPDH-210ENST00000496049 PARP9Q8IXQ6 854 aa14.31□□□□□ -0.12
GAPDH-210ENST00000496049 FNDC5Q8NAU1 212 aa14.31□□□□□ -0.12
GAPDH-210ENST00000496049 SRFBP1Q8NEF9 429 aaKnown RBP14.31□□□□□ -0.12
GAPDH-210ENST00000496049 NT5CQ8TCD5 201 aa14.31□□□□□ -0.12
GAPDH-210ENST00000496049 CCDC74BQ96LY2 380 aa14.31□□□□□ -0.12
GAPDH-210ENST00000496049 TMEM74Q96NL1 305 aa14.31□□□□□ -0.12
GAPDH-210ENST00000496049 EBF4Q9BQW3 602 aa14.31□□□□□ -0.12
GAPDH-210ENST00000496049 MS4A8Q9BY19 250 aa14.31□□□□□ -0.12
GAPDH-210ENST00000496049 WDR55Q9H6Y2 383 aaPredicted RBP14.31□□□□□ -0.12
GAPDH-210ENST00000496049 LRTM1Q9HBL6 345 aa14.31□□□□□ -0.12
GAPDH-210ENST00000496049 C1orf109Q9NX04 203 aa14.31□□□□□ -0.12
GAPDH-210ENST00000496049 AKAP7Q9P0M2 348 aaPredicted RBP14.31□□□□□ -0.12
GAPDH-210ENST00000496049 TMEM9Q9P0T7 183 aa14.31□□□□□ -0.12
GAPDH-210ENST00000496049 SEMA5BQ9P283 1151 aa14.31□□□□□ -0.12
GAPDH-210ENST00000496049 PILRAQ9UKJ1 303 aa14.31□□□□□ -0.12
GAPDH-210ENST00000496049 PLCL2Q9UPR0 1127 aa14.31□□□□□ -0.12
GAPDH-210ENST00000496049 TMED5Q9Y3A6 229 aa14.31□□□□□ -0.12
GAPDH-210ENST00000496049 PCDHGA1Q9Y5H4 931 aa14.31□□□□□ -0.12
GAPDH-210ENST00000496049 KNTC1P50748 2209 aa14.31□□□□□ -0.12
GAPDH-210ENST00000496049 NOTCH2Q04721 2471 aa14.31□□□□□ -0.12
GAPDH-210ENST00000496049 DOPEY1Q5JWR5 2465 aa14.3□□□□□ -0.12
GAPDH-210ENST00000496049 A0A088AWK7 358 aa14.3□□□□□ -0.12
GAPDH-210ENST00000496049 A8MU76 341 aa14.3□□□□□ -0.12
GAPDH-210ENST00000496049 TMX2-CTNND1H3BSU7 103 aa14.3□□□□□ -0.12
GAPDH-210ENST00000496049 LSM1O15116 133 aaKnown RBP14.3□□□□□ -0.12
GAPDH-210ENST00000496049 NRP2O60462 931 aa14.3□□□□□ -0.12
GAPDH-210ENST00000496049 SRPX2O60687 465 aaPredicted RBP14.3□□□□□ -0.12
GAPDH-210ENST00000496049 PEX11AO75192 247 aa14.3□□□□□ -0.12
GAPDH-210ENST00000496049 TGFB1P01137 390 aa14.3□□□□□ -0.12
GAPDH-210ENST00000496049 ZNF10P21506 573 aaPredicted RBP14.3□□□□□ -0.12
GAPDH-210ENST00000496049 PRPH2P23942 346 aa14.3□□□□□ -0.12
GAPDH-210ENST00000496049 SEPHS1P49903 392 aa14.3□□□□□ -0.12
GAPDH-210ENST00000496049 STX1BP61266 288 aa14.3□□□□□ -0.12
GAPDH-210ENST00000496049 ERVK-8P63133 956 aa14.3□□□□□ -0.12
GAPDH-210ENST00000496049 RPL38P63173 70 aaKnown RBP14.3□□□□□ -0.12
GAPDH-210ENST00000496049 HMGCS1Q01581 520 aa14.3□□□□□ -0.12
GAPDH-210ENST00000496049 ZIC1Q15915 447 aa14.3□□□□□ -0.12
GAPDH-210ENST00000496049 TCTE1Q5JU00 501 aa14.3□□□□□ -0.12
GAPDH-210ENST00000496049 MANEAQ5SRI9 462 aa14.3□□□□□ -0.12
GAPDH-210ENST00000496049 KHDRBS2Q5VWX1 349 aaKnown RBP14.3□□□□□ -0.12
GAPDH-210ENST00000496049 METTL21CQ5VZV1 264 aa14.3□□□□□ -0.12
GAPDH-210ENST00000496049 ADNP2Q6IQ32 1131 aa14.3□□□□□ -0.12
GAPDH-210ENST00000496049 OGFOD2Q6N063 350 aa14.3□□□□□ -0.12
GAPDH-210ENST00000496049 PCSK4Q6UW60 755 aa14.3□□□□□ -0.12
GAPDH-210ENST00000496049 PAGE2Q7Z2X7 111 aa14.3□□□□□ -0.12
GAPDH-210ENST00000496049 SPATA19Q7Z5L4 167 aa14.3□□□□□ -0.12
GAPDH-210ENST00000496049 ZFAND4Q86XD8 727 aa14.3□□□□□ -0.12
GAPDH-210ENST00000496049 CSNK1A1LQ8N752 337 aa14.3□□□□□ -0.12
GAPDH-210ENST00000496049 SLC13A3Q8WWT9 602 aa14.3□□□□□ -0.12
GAPDH-210ENST00000496049 KLHL6Q8WZ60 621 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms