RNA–Protein interactions for RNA: ENST00000496024.1

CALD1-223, Transcript of caldesmon 1, humanhuman

TSL 4

Gene CALD1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-223ENST00000496024 EXD3Q8N9H8 876 aa9.31□□□□□ -0.92
CALD1-223ENST00000496024 CCDC63Q8NA47 563 aa9.31□□□□□ -0.92
CALD1-223ENST00000496024 TTLQ8NG68 377 aa9.31□□□□□ -0.92
CALD1-223ENST00000496024 OR5T3Q8NGG3 340 aa9.31□□□□□ -0.92
CALD1-223ENST00000496024 ADAMTS17Q8TE56 1095 aa9.31□□□□□ -0.92
CALD1-223ENST00000496024 THAP4Q8WY91 577 aa9.31□□□□□ -0.92
CALD1-223ENST00000496024 WDR34Q96EX3 536 aa9.31□□□□□ -0.92
CALD1-223ENST00000496024 CDK15Q96Q40 435 aa9.31□□□□□ -0.92
CALD1-223ENST00000496024 F2RL3Q96RI0 385 aa9.31□□□□□ -0.92
CALD1-223ENST00000496024 SPSB2Q99619 263 aa9.31□□□□□ -0.92
CALD1-223ENST00000496024 MESP1Q9BRJ9 268 aa9.31□□□□□ -0.92
CALD1-223ENST00000496024 FAM117AQ9C073 453 aa9.31□□□□□ -0.92
CALD1-223ENST00000496024 SLC6A16Q9GZN6 736 aa9.31□□□□□ -0.92
CALD1-223ENST00000496024 AICDAQ9GZX7 198 aa9.31□□□□□ -0.92
CALD1-223ENST00000496024 RHBGQ9H310 441 aa9.31□□□□□ -0.92
CALD1-223ENST00000496024 C12orf65Q9H3J6 166 aaKnown RBP9.31□□□□□ -0.92
CALD1-223ENST00000496024 EHD1Q9H4M9 534 aa9.31□□□□□ -0.92
CALD1-223ENST00000496024 NT5DC2Q9H857 520 aa9.31□□□□□ -0.92
CALD1-223ENST00000496024 WDR54Q9H977 334 aa9.31□□□□□ -0.92
CALD1-223ENST00000496024 SEMA4BQ9NPR2 832 aaPredicted RBP9.31□□□□□ -0.92
CALD1-223ENST00000496024 DCDC2Q9UHG0 476 aa9.31□□□□□ -0.92
CALD1-223ENST00000496024 C3orf18Q9UK00 162 aa9.31□□□□□ -0.92
CALD1-223ENST00000496024 PCTPQ9UKL6 214 aa9.31□□□□□ -0.92
CALD1-223ENST00000496024 TMCO1Q9UM00 188 aa9.31□□□□□ -0.92
CALD1-223ENST00000496024 MAP4K5Q9Y4K4 846 aa9.31□□□□□ -0.92
CALD1-223ENST00000496024 KCNMB2Q9Y691 235 aa9.31□□□□□ -0.92
CALD1-223ENST00000496024 SLC22A7Q9Y694 548 aa9.31□□□□□ -0.92
CALD1-223ENST00000496024 CNTRLQ7Z7A1 2325 aa9.31□□□□□ -0.92
CALD1-223ENST00000496024 PCSK5Q92824 1860 aa9.3□□□□□ -0.92
CALD1-223ENST00000496024 SMG1Q96Q15 3661 aaKnown RBP9.3□□□□□ -0.92
CALD1-223ENST00000496024 OR2W5A6NFC9 320 aa9.3□□□□□ -0.92
CALD1-223ENST00000496024 URADA6NGE7 173 aa9.3□□□□□ -0.92
CALD1-223ENST00000496024 A6NL46 340 aa9.3□□□□□ -0.92
CALD1-223ENST00000496024 VSTM2BA6NLU5 285 aa9.3□□□□□ -0.92
CALD1-223ENST00000496024 EIF4E1BA6NMX2 242 aaKnown RBP9.3□□□□□ -0.92
CALD1-223ENST00000496024 H0YIG0 161 aa9.3□□□□□ -0.92
CALD1-223ENST00000496024 STX16-NPEPL1H3BU86 382 aa9.3□□□□□ -0.92
CALD1-223ENST00000496024 E2F3O00716 465 aa9.3□□□□□ -0.92
CALD1-223ENST00000496024 OR7A17O14581 309 aa9.3□□□□□ -0.92
CALD1-223ENST00000496024 STX16O14662 325 aa9.3□□□□□ -0.92
CALD1-223ENST00000496024 ATXN7O15265 892 aaPredicted RBP9.3□□□□□ -0.92
CALD1-223ENST00000496024 ERI3O43414 337 aaKnown RBP9.3□□□□□ -0.92
CALD1-223ENST00000496024 DLX3O60479 287 aa9.3□□□□□ -0.92
CALD1-223ENST00000496024 GALR3O60755 368 aaPredicted RBP9.3□□□□□ -0.92
CALD1-223ENST00000496024 DNAJB6O75190 326 aa9.3□□□□□ -0.92
CALD1-223ENST00000496024 GLRA3O75311 464 aa9.3□□□□□ -0.92
CALD1-223ENST00000496024 ALOX12BO75342 701 aa9.3□□□□□ -0.92
CALD1-223ENST00000496024 CLEC3AO75596 197 aa9.3□□□□□ -0.92
CALD1-223ENST00000496024 TGFB1P01137 390 aa9.3□□□□□ -0.92
CALD1-223ENST00000496024 PRB1P04280 392 aa9.3□□□□□ -0.92
CALD1-223ENST00000496024 TUBBP07437 444 aa9.3□□□□□ -0.92
CALD1-223ENST00000496024 HEXBP07686 556 aa9.3□□□□□ -0.92
CALD1-223ENST00000496024 GSTA1P08263 222 aa9.3□□□□□ -0.92
CALD1-223ENST00000496024 KRT4P19013 534 aa9.3□□□□□ -0.92
CALD1-223ENST00000496024 ATP5F1P24539 256 aaPredicted RBP9.3□□□□□ -0.92
CALD1-223ENST00000496024 HNRNPH1P31943 449 aaKnown RBP9.3□□□□□ -0.92
CALD1-223ENST00000496024 CASP2P42575 452 aa9.3□□□□□ -0.92
CALD1-223ENST00000496024 XCR1P46094 333 aa9.3□□□□□ -0.92
CALD1-223ENST00000496024 CCT5P48643 541 aa9.3□□□□□ -0.92
CALD1-223ENST00000496024 CCL11P51671 97 aa9.3□□□□□ -0.92
CALD1-223ENST00000496024 PLA2G16P53816 162 aa9.3□□□□□ -0.92
CALD1-223ENST00000496024 EMP2P54851 167 aa9.3□□□□□ -0.92
CALD1-223ENST00000496024 CDH13P55290 713 aa9.3□□□□□ -0.92
CALD1-223ENST00000496024 STXBP1P61764 594 aaKnown RBP9.3□□□□□ -0.92
CALD1-223ENST00000496024 BTN3A2P78410 334 aa9.3□□□□□ -0.92
CALD1-223ENST00000496024 HERC3Q15034 1050 aa9.3□□□□□ -0.92
CALD1-223ENST00000496024 TBCCQ15814 346 aa9.3□□□□□ -0.92
CALD1-223ENST00000496024 CPSF6Q16630 551 aaKnown RBP eCLIP9.3□□□□□ -0.92
CALD1-223ENST00000496024 KRT71Q3SY84 523 aa9.3□□□□□ -0.92
CALD1-223ENST00000496024 MINDY4Q4G0A6 757 aa9.3□□□□□ -0.92
CALD1-223ENST00000496024 SOWAHCQ53LP3 525 aaPredicted RBP9.3□□□□□ -0.92
CALD1-223ENST00000496024 GRHL2Q6ISB3 625 aa9.3□□□□□ -0.92
CALD1-223ENST00000496024 MED27Q6P2C8 311 aa9.3□□□□□ -0.92
CALD1-223ENST00000496024 SH2D5Q6ZV89 423 aa9.3□□□□□ -0.92
CALD1-223ENST00000496024 ABHD13Q7L211 337 aa9.3□□□□□ -0.92
CALD1-223ENST00000496024 MRGPREQ86SM8 312 aa9.3□□□□□ -0.92
CALD1-223ENST00000496024 LCA5Q86VQ0 697 aa9.3□□□□□ -0.92
CALD1-223ENST00000496024 ZC3H7AQ8IWR0 971 aaKnown RBP9.3□□□□□ -0.92
CALD1-223ENST00000496024 SRRM1Q8IYB3 904 aaKnown RBP9.3□□□□□ -0.92
CALD1-223ENST00000496024 RIBC1Q8N443 379 aaPredicted RBP9.3□□□□□ -0.92
CALD1-223ENST00000496024 AFAP1L2Q8N4X5 818 aa9.3□□□□□ -0.92
CALD1-223ENST00000496024 MREGQ8N565 214 aa9.3□□□□□ -0.92
CALD1-223ENST00000496024 OR7G3Q8NG95 312 aa9.3□□□□□ -0.92
CALD1-223ENST00000496024 OR52B6Q8NGF0 335 aa9.3□□□□□ -0.92
CALD1-223ENST00000496024 OR51Q1Q8NH59 317 aa9.3□□□□□ -0.92
CALD1-223ENST00000496024 TRPC4APQ8TEL6 797 aa9.3□□□□□ -0.92
CALD1-223ENST00000496024 PPP4R1Q8TF05 950 aa9.3□□□□□ -0.92
CALD1-223ENST00000496024 SLC39A7Q92504 469 aa9.3□□□□□ -0.92
CALD1-223ENST00000496024 UBE2E3Q969T4 207 aa9.3□□□□□ -0.92
CALD1-223ENST00000496024 C8orf44Q96CB5 159 aa9.3□□□□□ -0.92
CALD1-223ENST00000496024 MTFMTQ96DP5 389 aaKnown RBP9.3□□□□□ -0.92
CALD1-223ENST00000496024 PEX11GQ96HA9 241 aa9.3□□□□□ -0.92
CALD1-223ENST00000496024 FAR2Q96K12 515 aa9.3□□□□□ -0.92
CALD1-223ENST00000496024 MTERF1Q99551 399 aaKnown RBP9.3□□□□□ -0.92
CALD1-223ENST00000496024 TRIM55Q9BYV6 548 aa9.3□□□□□ -0.92
CALD1-223ENST00000496024 ROPN1BQ9BZX4 212 aaPredicted RBP9.3□□□□□ -0.92
CALD1-223ENST00000496024 SEMA4CQ9C0C4 833 aa9.3□□□□□ -0.92
CALD1-223ENST00000496024 PITHD1Q9GZP4 211 aaPredicted RBP9.3□□□□□ -0.92
CALD1-223ENST00000496024 ING2Q9H160 280 aa9.3□□□□□ -0.92
CALD1-223ENST00000496024 SLC26A1Q9H2B4 701 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms