RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 UGP2Q16851 508 aa4.14□□□□□ -1.75
VPS52-222ENST00000495981 AP5B1Q2VPB7 878 aa4.14□□□□□ -1.75
VPS52-222ENST00000495981 NADK2Q4G0N4 442 aa4.14□□□□□ -1.75
VPS52-222ENST00000495981 LACTB2Q53H82 288 aaPredicted RBP4.14□□□□□ -1.75
VPS52-222ENST00000495981 HSP90AA4PQ58FG1 418 aa4.14□□□□□ -1.75
VPS52-222ENST00000495981 SPECC1LQ69YQ0 1117 aa4.14□□□□□ -1.75
VPS52-222ENST00000495981 RWDD4Q6NW29 188 aaKnown RBP4.14□□□□□ -1.75
VPS52-222ENST00000495981 CDC73Q6P1J9 531 aa4.14□□□□□ -1.75
VPS52-222ENST00000495981 TMEM81Q6P7N7 255 aa4.14□□□□□ -1.75
VPS52-222ENST00000495981 KLHL35Q6PF15 583 aa4.14□□□□□ -1.75
VPS52-222ENST00000495981 BRAT1Q6PJG6 821 aa4.14□□□□□ -1.75
VPS52-222ENST00000495981 SPNS3Q6ZMD2 512 aa4.14□□□□□ -1.75
VPS52-222ENST00000495981 DPPA4Q7L190 304 aa4.14□□□□□ -1.75
VPS52-222ENST00000495981 RNF144BQ7Z419 303 aa4.14□□□□□ -1.75
VPS52-222ENST00000495981 DNAAF5Q86Y56 855 aa4.14□□□□□ -1.75
VPS52-222ENST00000495981 NRROSQ86YC3 692 aa4.14□□□□□ -1.75
VPS52-222ENST00000495981 PHF13Q86YI8 300 aaPredicted RBP4.14□□□□□ -1.75
VPS52-222ENST00000495981 LINC00346Q8IVM7 164 aa4.14□□□□□ -1.75
VPS52-222ENST00000495981 GSPT2Q8IYD1 628 aaKnown RBP4.14□□□□□ -1.75
VPS52-222ENST00000495981 LAS2Q8IYD9 372 aa4.14□□□□□ -1.75
VPS52-222ENST00000495981 UMODL1-AS1Q8N2C9 162 aa4.14□□□□□ -1.75
VPS52-222ENST00000495981 RYBPQ8N488 228 aaPredicted RBP4.14□□□□□ -1.75
VPS52-222ENST00000495981 BMPERQ8N8U9 685 aa4.14□□□□□ -1.75
VPS52-222ENST00000495981 OR56A4Q8NGH8 313 aa4.14□□□□□ -1.75
VPS52-222ENST00000495981 CXorf40AQ8TE69 158 aa4.14□□□□□ -1.75
VPS52-222ENST00000495981 RXFP2Q8WXD0 754 aa4.14□□□□□ -1.75
VPS52-222ENST00000495981 CNOT9Q92600 299 aaKnown RBP4.14□□□□□ -1.75
VPS52-222ENST00000495981 TMEM159Q96B96 161 aa4.14□□□□□ -1.75
VPS52-222ENST00000495981 MOCOSQ96EN8 888 aa4.14□□□□□ -1.75
VPS52-222ENST00000495981 VPS50Q96JG6 964 aa4.14□□□□□ -1.75
VPS52-222ENST00000495981 KLHL15Q96M94 604 aa4.14□□□□□ -1.75
VPS52-222ENST00000495981 COQ10AQ96MF6 247 aa4.14□□□□□ -1.75
VPS52-222ENST00000495981 APOOQ9BUR5 198 aa4.14□□□□□ -1.75
VPS52-222ENST00000495981 HEMGNQ9BXL5 484 aa4.14□□□□□ -1.75
VPS52-222ENST00000495981 FRMD8Q9BZ67 464 aaPredicted RBP4.14□□□□□ -1.75
VPS52-222ENST00000495981 B3GNT4Q9C0J1 378 aa4.14□□□□□ -1.75
VPS52-222ENST00000495981 STRADBQ9C0K7 418 aa4.14□□□□□ -1.75
VPS52-222ENST00000495981 RETREG1Q9H6L5 497 aa4.14□□□□□ -1.75
VPS52-222ENST00000495981 WDR26Q9H7D7 661 aa4.14□□□□□ -1.75
VPS52-222ENST00000495981 RDH14Q9HBH5 336 aa4.14□□□□□ -1.75
VPS52-222ENST00000495981 DECR2Q9NUI1 292 aa4.14□□□□□ -1.75
VPS52-222ENST00000495981 ABHD10Q9NUJ1 306 aa4.14□□□□□ -1.75
VPS52-222ENST00000495981 TMEM51Q9NW97 253 aa4.14□□□□□ -1.75
VPS52-222ENST00000495981 TMEM9Q9P0T7 183 aa4.14□□□□□ -1.75
VPS52-222ENST00000495981 SEMA5BQ9P283 1151 aa4.14□□□□□ -1.75
VPS52-222ENST00000495981 MKLN1Q9UL63 735 aa4.14□□□□□ -1.75
VPS52-222ENST00000495981 SUFUQ9UMX1 484 aa4.14□□□□□ -1.75
VPS52-222ENST00000495981 VPS4AQ9UN37 437 aa4.14□□□□□ -1.75
VPS52-222ENST00000495981 B3GNT3Q9Y2A9 372 aa4.14□□□□□ -1.75
VPS52-222ENST00000495981 PCDHGB5Q9Y5G0 923 aa4.14□□□□□ -1.75
VPS52-222ENST00000495981 PCYT1BQ9Y5K3 369 aaPredicted RBP4.14□□□□□ -1.75
VPS52-222ENST00000495981 PRRC2AP48634 2157 aaKnown RBP4.14□□□□□ -1.75
VPS52-222ENST00000495981 PCM1Q15154 2024 aa4.13□□□□□ -1.75
VPS52-222ENST00000495981 TRGV11A0A075B6L2 103 aa4.13□□□□□ -1.75
VPS52-222ENST00000495981 IGHV5-10-1A0A0J9YXX1 117 aa4.13□□□□□ -1.75
VPS52-222ENST00000495981 GOLGA6L4A6NEF3 574 aa4.13□□□□□ -1.75
VPS52-222ENST00000495981 A8MZ25 164 aa4.13□□□□□ -1.75
VPS52-222ENST00000495981 STMND1H3BQB6 276 aa4.13□□□□□ -1.75
VPS52-222ENST00000495981 J3KR12 359 aa4.13□□□□□ -1.75
VPS52-222ENST00000495981 AP4M1O00189 453 aa4.13□□□□□ -1.75
VPS52-222ENST00000495981 PSMD9O00233 223 aa4.13□□□□□ -1.75
VPS52-222ENST00000495981 BUB1O43683 1085 aa4.13□□□□□ -1.75
VPS52-222ENST00000495981 LIASO43766 372 aa4.13□□□□□ -1.75
VPS52-222ENST00000495981 RECQL5O94762 991 aaPredicted RBP4.13□□□□□ -1.75
VPS52-222ENST00000495981 TJP3O95049 919 aa4.13□□□□□ -1.75
VPS52-222ENST00000495981 SCAF4O95104 1147 aaKnown RBP4.13□□□□□ -1.75
VPS52-222ENST00000495981 FGFR1OPO95684 399 aaKnown RBP4.13□□□□□ -1.75
VPS52-222ENST00000495981 PEX11BO96011 259 aa4.13□□□□□ -1.75
VPS52-222ENST00000495981 CHRM4P08173 479 aa4.13□□□□□ -1.75
VPS52-222ENST00000495981 HOXC4P09017 264 aaPredicted RBP4.13□□□□□ -1.75
VPS52-222ENST00000495981 FGF3P11487 239 aaPredicted RBP4.13□□□□□ -1.75
VPS52-222ENST00000495981 CYP4B1P13584 511 aa4.13□□□□□ -1.75
VPS52-222ENST00000495981 SELLP14151 372 aa4.13□□□□□ -1.75
VPS52-222ENST00000495981 CDH2P19022 906 aaPredicted RBP4.13□□□□□ -1.75
VPS52-222ENST00000495981 GPD1P21695 349 aa4.13□□□□□ -1.75
VPS52-222ENST00000495981 NR4A1P22736 598 aa4.13□□□□□ -1.75
VPS52-222ENST00000495981 EPHB2P29323 1055 aa4.13□□□□□ -1.75
VPS52-222ENST00000495981 GCH1P30793 250 aa4.13□□□□□ -1.75
VPS52-222ENST00000495981 TTKP33981 857 aa4.13□□□□□ -1.75
VPS52-222ENST00000495981 RFC1P35251 1148 aaPredicted RBP4.13□□□□□ -1.75
VPS52-222ENST00000495981 GJC1P36383 396 aa4.13□□□□□ -1.75
VPS52-222ENST00000495981 TRIM23P36406 574 aa4.13□□□□□ -1.75
VPS52-222ENST00000495981 ARL1P40616 181 aaPredicted RBP4.13□□□□□ -1.75
VPS52-222ENST00000495981 MTIF2P46199 727 aaKnown RBP4.13□□□□□ -1.75
VPS52-222ENST00000495981 BLKP51451 505 aa4.13□□□□□ -1.75
VPS52-222ENST00000495981 SLC37A1P57057 533 aa4.13□□□□□ -1.75
VPS52-222ENST00000495981 YBEYP58557 167 aaPredicted RBP4.13□□□□□ -1.75
VPS52-222ENST00000495981 CDK3Q00526 305 aa4.13□□□□□ -1.75
VPS52-222ENST00000495981 ALKBH1Q13686 389 aaKnown RBP4.13□□□□□ -1.75
VPS52-222ENST00000495981 DPYSQ14117 519 aa4.13□□□□□ -1.75
VPS52-222ENST00000495981 IL13RA2Q14627 380 aa4.13□□□□□ -1.75
VPS52-222ENST00000495981 KYNUQ16719 465 aa4.13□□□□□ -1.75
VPS52-222ENST00000495981 CA9Q16790 459 aa4.13□□□□□ -1.75
VPS52-222ENST00000495981 DEFB109BQ30KR1 87 aa4.13□□□□□ -1.75
VPS52-222ENST00000495981 GXYLT1Q4G148 440 aa4.13□□□□□ -1.75
VPS52-222ENST00000495981 ENPP7Q6UWV6 458 aa4.13□□□□□ -1.75
VPS52-222ENST00000495981 TRIM72Q6ZMU5 477 aa4.13□□□□□ -1.75
VPS52-222ENST00000495981 FAM47EQ6ZV65 393 aa4.13□□□□□ -1.75
VPS52-222ENST00000495981 PTCHD4Q6ZW05 846 aa4.13□□□□□ -1.75
VPS52-222ENST00000495981 APTXQ7Z2E3 356 aaKnown RBP4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms