RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 RASGEF1AQ8N9B8 481 aa12.95□□□□□ -0.34
GPC1-209ENST00000495100 CEP44Q9C0F1 390 aa12.95□□□□□ -0.34
GPC1-209ENST00000495100 FZD3Q9NPG1 666 aa12.95□□□□□ -0.34
GPC1-209ENST00000495100 PRKAG2Q9UGJ0 569 aa12.95□□□□□ -0.34
GPC1-209ENST00000495100 GPR52Q9Y2T5 361 aa12.95□□□□□ -0.34
GPC1-209ENST00000495100 SNX11Q9Y5W9 270 aa12.95□□□□□ -0.34
GPC1-209ENST00000495100 GNB5O14775 395 aa12.94□□□□□ -0.34
GPC1-209ENST00000495100 GADD45GO95257 159 aa12.94□□□□□ -0.34
GPC1-209ENST00000495100 AMD1P17707 334 aa12.94□□□□□ -0.34
GPC1-209ENST00000495100 SSTR4P31391 388 aa12.94□□□□□ -0.34
GPC1-209ENST00000495100 ZXDCQ2QGD7 858 aaPredicted RBP12.94□□□□□ -0.34
GPC1-209ENST00000495100 C2orf27AQ580R0 203 aa12.94□□□□□ -0.34
GPC1-209ENST00000495100 ARMCX4Q5H9R4 360 aa12.94□□□□□ -0.34
GPC1-209ENST00000495100 SMARCD3Q6STE5 483 aa12.94□□□□□ -0.34
GPC1-209ENST00000495100 NPAS3Q8IXF0 933 aa12.94□□□□□ -0.34
GPC1-209ENST00000495100 PDPRQ8NCN5 879 aa12.94□□□□□ -0.34
GPC1-209ENST00000495100 OR5AR1Q8NGP9 310 aa12.94□□□□□ -0.34
GPC1-209ENST00000495100 OR9Q1Q8NGQ5 310 aa12.94□□□□□ -0.34
GPC1-209ENST00000495100 DNASE1L2Q92874 299 aa12.94□□□□□ -0.34
GPC1-209ENST00000495100 NIPSNAP1Q9BPW8 284 aa12.94□□□□□ -0.34
GPC1-209ENST00000495100 TMA7Q9Y2S6 64 aaKnown RBP12.94□□□□□ -0.34
GPC1-209ENST00000495100 UPK1AO00322 258 aa12.94□□□□□ -0.34
GPC1-209ENST00000495100 GAPDHSO14556 408 aaPredicted RBP12.94□□□□□ -0.34
GPC1-209ENST00000495100 PCDHGA12O60330 932 aa12.94□□□□□ -0.34
GPC1-209ENST00000495100 CLK3P49761 638 aaKnown RBP12.94□□□□□ -0.34
GPC1-209ENST00000495100 MAPK12P53778 367 aa12.94□□□□□ -0.34
GPC1-209ENST00000495100 TARDBPQ13148 414 aaKnown RBP eCLIP12.94□□□□□ -0.34
GPC1-209ENST00000495100 GPNMBQ14956 572 aa12.94□□□□□ -0.34
GPC1-209ENST00000495100 ARHGAP15Q53QZ3 475 aa12.94□□□□□ -0.34
GPC1-209ENST00000495100 LHX8Q68G74 356 aa12.94□□□□□ -0.34
GPC1-209ENST00000495100 CCSAPQ6IQ19 270 aaPredicted RBP12.94□□□□□ -0.34
GPC1-209ENST00000495100 EIF3MQ7L2H7 374 aaKnown RBP12.94□□□□□ -0.34
GPC1-209ENST00000495100 RBM45Q8IUH3 476 aaKnown RBP12.94□□□□□ -0.34
GPC1-209ENST00000495100 FLCNQ8NFG4 579 aa12.94□□□□□ -0.34
GPC1-209ENST00000495100 CSGALNACT1Q8TDX6 532 aa12.94□□□□□ -0.34
GPC1-209ENST00000495100 ZSWIM3Q96MP5 696 aa12.94□□□□□ -0.34
GPC1-209ENST00000495100 BBS4Q96RK4 519 aa12.94□□□□□ -0.34
GPC1-209ENST00000495100 NLNQ9BYT8 704 aa12.94□□□□□ -0.34
GPC1-209ENST00000495100 TIGARQ9NQ88 270 aa12.94□□□□□ -0.34
GPC1-209ENST00000495100 SH2B3Q9UQQ2 575 aa12.94□□□□□ -0.34
GPC1-209ENST00000495100 FADS2P1A8MWK0 482 aa12.93□□□□□ -0.34
GPC1-209ENST00000495100 TLL1O43897 1013 aa12.93□□□□□ -0.34
GPC1-209ENST00000495100 ADH1AP07327 375 aa12.93□□□□□ -0.34
GPC1-209ENST00000495100 CYP2A6P11509 494 aaPredicted RBP12.93□□□□□ -0.34
GPC1-209ENST00000495100 EPCAMP16422 314 aa12.93□□□□□ -0.34
GPC1-209ENST00000495100 CD22P20273 847 aa12.93□□□□□ -0.34
GPC1-209ENST00000495100 GP2P55259 537 aaKnown RBP12.93□□□□□ -0.34
GPC1-209ENST00000495100 RPL26P61254 145 aaKnown RBP12.93□□□□□ -0.34
GPC1-209ENST00000495100 MOGQ16653 247 aa12.93□□□□□ -0.34
GPC1-209ENST00000495100 COMMD6Q7Z4G1 85 aa12.93□□□□□ -0.34
GPC1-209ENST00000495100 OR13F1Q8NGS4 319 aa12.93□□□□□ -0.34
GPC1-209ENST00000495100 PEX13Q92968 403 aa12.93□□□□□ -0.34
GPC1-209ENST00000495100 C17orf62Q9BQA9 187 aa12.93□□□□□ -0.34
GPC1-209ENST00000495100 SEC14L3Q9UDX4 400 aa12.93□□□□□ -0.34
GPC1-209ENST00000495100 RUVBL1Q9Y265 456 aaKnown RBP12.93□□□□□ -0.34
GPC1-209ENST00000495100 GPSM3Q9Y4H4 160 aa12.93□□□□□ -0.34
GPC1-209ENST00000495100 TSC22D2O75157 780 aa12.93□□□□□ -0.34
GPC1-209ENST00000495100 FHP07954 510 aa12.93□□□□□ -0.34
GPC1-209ENST00000495100 ZDHHC11BP0C7U3 371 aa12.93□□□□□ -0.34
GPC1-209ENST00000495100 SOX3P41225 446 aa12.93□□□□□ -0.34
GPC1-209ENST00000495100 CLCNKAP51800 687 aa12.93□□□□□ -0.34
GPC1-209ENST00000495100 CDK6Q00534 326 aa12.93□□□□□ -0.34
GPC1-209ENST00000495100 SLC5A12Q1EHB4 618 aa12.93□□□□□ -0.34
GPC1-209ENST00000495100 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.93□□□□□ -0.34
GPC1-209ENST00000495100 SPANXN2Q5MJ10 180 aa12.93□□□□□ -0.34
GPC1-209ENST00000495100 KIAA1614Q5VZ46 1190 aa12.93□□□□□ -0.34
GPC1-209ENST00000495100 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.93□□□□□ -0.34
GPC1-209ENST00000495100 GET4Q7L5D6 327 aaPredicted RBP12.93□□□□□ -0.34
GPC1-209ENST00000495100 LEMD2Q8NC56 503 aa12.93□□□□□ -0.34
GPC1-209ENST00000495100 HDAC2Q92769 488 aaKnown RBP12.93□□□□□ -0.34
GPC1-209ENST00000495100 IRF7Q92985 503 aa12.93□□□□□ -0.34
GPC1-209ENST00000495100 TMEM184CQ9NVA4 438 aa12.93□□□□□ -0.34
GPC1-209ENST00000495100 A0A1B0GVC2 190 aa12.93□□□□□ -0.34
GPC1-209ENST00000495100 A6NIN4 97 aa12.93□□□□□ -0.34
GPC1-209ENST00000495100 UGT2B11O75310 529 aa12.93□□□□□ -0.34
GPC1-209ENST00000495100 SSR2P43308 183 aa12.93□□□□□ -0.34
GPC1-209ENST00000495100 DGKGP49619 791 aa12.93□□□□□ -0.34
GPC1-209ENST00000495100 BCAP31P51572 246 aa12.93□□□□□ -0.34
GPC1-209ENST00000495100 ERVFC1P60507 584 aa12.93□□□□□ -0.34
GPC1-209ENST00000495100 RPS7P62081 194 aaKnown RBP12.93□□□□□ -0.34
GPC1-209ENST00000495100 PIN1Q13526 163 aaPredicted RBP12.93□□□□□ -0.34
GPC1-209ENST00000495100 ZNF750Q32MQ0 723 aa12.93□□□□□ -0.34
GPC1-209ENST00000495100 CASP12Q6UXS9 341 aa12.93□□□□□ -0.34
GPC1-209ENST00000495100 TMEM150AQ86TG1 271 aa12.93□□□□□ -0.34
GPC1-209ENST00000495100 SVOPLQ8N434 492 aa12.93□□□□□ -0.34
GPC1-209ENST00000495100 ASB11Q8WXH4 323 aa12.93□□□□□ -0.34
GPC1-209ENST00000495100 C1GALT1C1Q96EU7 318 aa12.93□□□□□ -0.34
GPC1-209ENST00000495100 FERD3LQ96RJ6 166 aa12.93□□□□□ -0.34
GPC1-209ENST00000495100 FAM129BQ96TA1 746 aa12.93□□□□□ -0.34
GPC1-209ENST00000495100 SPNS1Q9H2V7 528 aa12.93□□□□□ -0.34
GPC1-209ENST00000495100 SEMA3GQ9NS98 782 aa12.93□□□□□ -0.34
GPC1-209ENST00000495100 TMEM189-UBE2V1I3L0A0 370 aa12.92□□□□□ -0.34
GPC1-209ENST00000495100 SNPHO15079 494 aa12.92□□□□□ -0.34
GPC1-209ENST00000495100 ANKRD28O15084 1053 aa12.92□□□□□ -0.34
GPC1-209ENST00000495100 LRRTM2O43300 516 aa12.92□□□□□ -0.34
GPC1-209ENST00000495100 AP2A2O94973 939 aa12.92□□□□□ -0.34
GPC1-209ENST00000495100 KCNK5O95279 499 aa12.92□□□□□ -0.34
GPC1-209ENST00000495100 C8GP07360 202 aa12.92□□□□□ -0.34
GPC1-209ENST00000495100 RHOP08100 348 aa12.92□□□□□ -0.34
GPC1-209ENST00000495100 ISL1P61371 349 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms