RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 Q6ZPB1 254 aaPredicted RBP20.74■□□□□ 0.91
HDDC3-203ENST00000494993 GALNT7Q86SF2 657 aa20.74■□□□□ 0.91
HDDC3-203ENST00000494993 TBC1D19Q8N5T2 526 aa20.74■□□□□ 0.91
HDDC3-203ENST00000494993 HORMAD2Q8N7B1 307 aa20.74■□□□□ 0.91
HDDC3-203ENST00000494993 ACTRT1Q8TDG2 376 aa20.74■□□□□ 0.91
HDDC3-203ENST00000494993 ELP5Q8TE02 316 aa20.74■□□□□ 0.91
HDDC3-203ENST00000494993 FBXL8Q96CD0 374 aa20.74■□□□□ 0.91
HDDC3-203ENST00000494993 NAT9Q9BTE0 207 aa20.74■□□□□ 0.91
HDDC3-203ENST00000494993 TRIM54Q9BYV2 358 aa20.74■□□□□ 0.91
HDDC3-203ENST00000494993 TSPAN10Q9H1Z9 355 aaPredicted RBP20.74■□□□□ 0.91
HDDC3-203ENST00000494993 GOLGA6L10A0A0M3HER8 536 aa20.73■□□□□ 0.91
HDDC3-203ENST00000494993 NPIPA5E9PKD4 350 aa20.73■□□□□ 0.91
HDDC3-203ENST00000494993 DNALI1O14645 258 aaPredicted RBP20.73■□□□□ 0.91
HDDC3-203ENST00000494993 CHST10O43529 356 aa20.73■□□□□ 0.91
HDDC3-203ENST00000494993 NRDCO43847 1150 aa20.73■□□□□ 0.91
HDDC3-203ENST00000494993 DNAJB6O75190 326 aa20.73■□□□□ 0.91
HDDC3-203ENST00000494993 NEURL1O76050 574 aa20.73■□□□□ 0.91
HDDC3-203ENST00000494993 B3GALT4O96024 378 aa20.73■□□□□ 0.91
HDDC3-203ENST00000494993 SERPIND1P05546 499 aa20.73■□□□□ 0.91
HDDC3-203ENST00000494993 SP1P08047 785 aa20.73■□□□□ 0.91
HDDC3-203ENST00000494993 OLR1P78380 273 aa20.73■□□□□ 0.91
HDDC3-203ENST00000494993 MSS51Q4VC12 460 aa20.73■□□□□ 0.91
HDDC3-203ENST00000494993 CATSPEREQ5SY80 951 aa20.73■□□□□ 0.91
HDDC3-203ENST00000494993 NIPAL1Q6NVV3 410 aa20.73■□□□□ 0.91
HDDC3-203ENST00000494993 GDF7Q7Z4P5 450 aa20.73■□□□□ 0.91
HDDC3-203ENST00000494993 GALNTL5Q7Z4T8 443 aa20.73■□□□□ 0.91
HDDC3-203ENST00000494993 STRA8Q7Z7C7 330 aa20.73■□□□□ 0.91
HDDC3-203ENST00000494993 FAM98AQ8NCA5 519 aaKnown RBP20.73■□□□□ 0.91
HDDC3-203ENST00000494993 NT5CQ8TCD5 201 aa20.73■□□□□ 0.91
HDDC3-203ENST00000494993 ATL1Q8WXF7 558 aa20.73■□□□□ 0.91
HDDC3-203ENST00000494993 CERS2Q96G23 380 aa20.73■□□□□ 0.91
HDDC3-203ENST00000494993 SPNS1Q9H2V7 528 aa20.73■□□□□ 0.91
HDDC3-203ENST00000494993 CDCP1Q9H5V8 836 aa20.73■□□□□ 0.91
HDDC3-203ENST00000494993 SLC17A6Q9P2U8 582 aa20.73■□□□□ 0.91
HDDC3-203ENST00000494993 NPIPA1Q9UND3 350 aa20.73■□□□□ 0.91
HDDC3-203ENST00000494993 DCHS2Q6V1P9 2916 aa20.73■□□□□ 0.91
HDDC3-203ENST00000494993 CSMD2Q7Z408 3487 aa20.72■□□□□ 0.91
HDDC3-203ENST00000494993 CDK2AP1O14519 115 aa20.72■□□□□ 0.91
HDDC3-203ENST00000494993 NDC80O14777 642 aa20.72■□□□□ 0.91
HDDC3-203ENST00000494993 ZNF888P0CJ79 500 aaPredicted RBP20.72■□□□□ 0.91
HDDC3-203ENST00000494993 COX6B1P14854 86 aa20.72■□□□□ 0.91
HDDC3-203ENST00000494993 AGAP20933 346 aa20.72■□□□□ 0.91
HDDC3-203ENST00000494993 PGGT1BP53609 377 aa20.72■□□□□ 0.91
HDDC3-203ENST00000494993 RGS1Q08116 209 aa20.72■□□□□ 0.91
HDDC3-203ENST00000494993 HECTD2Q5U5R9 776 aa20.72■□□□□ 0.91
HDDC3-203ENST00000494993 SLC25A25Q6KCM7 469 aa20.72■□□□□ 0.91
HDDC3-203ENST00000494993 RPS19BP1Q86WX3 136 aaKnown RBP20.72■□□□□ 0.91
HDDC3-203ENST00000494993 SPPL2CQ8IUH8 684 aa20.72■□□□□ 0.91
HDDC3-203ENST00000494993 KIF2BQ8N4N8 673 aa20.72■□□□□ 0.91
HDDC3-203ENST00000494993 SLC5A11Q8WWX8 675 aa20.72■□□□□ 0.91
HDDC3-203ENST00000494993 NEIL2Q969S2 332 aa20.72■□□□□ 0.91
HDDC3-203ENST00000494993 OSBPL9Q96SU4 736 aa20.72■□□□□ 0.91
HDDC3-203ENST00000494993 LRFN1Q9P244 771 aa20.72■□□□□ 0.91
HDDC3-203ENST00000494993 ASIC3Q9UHC3 531 aa20.72■□□□□ 0.91
HDDC3-203ENST00000494993 ZFP69BQ9UJL9 534 aa20.72■□□□□ 0.91
HDDC3-203ENST00000494993 B4GALT2O60909 372 aa20.71■□□□□ 0.91
HDDC3-203ENST00000494993 GUCA1CO95843 209 aa20.71■□□□□ 0.91
HDDC3-203ENST00000494993 SNRPB2P08579 225 aaKnown RBP20.71■□□□□ 0.91
HDDC3-203ENST00000494993 ENO2P09104 434 aaPredicted RBP20.71■□□□□ 0.91
HDDC3-203ENST00000494993 AHRP35869 848 aa20.71■□□□□ 0.91
HDDC3-203ENST00000494993 SCTRP47872 440 aa20.71■□□□□ 0.91
HDDC3-203ENST00000494993 SMSP52788 366 aa20.71■□□□□ 0.91
HDDC3-203ENST00000494993 CSHL1Q14406 222 aa20.71■□□□□ 0.91
HDDC3-203ENST00000494993 ZNF468Q5VIY5 522 aaPredicted RBP20.71■□□□□ 0.91
HDDC3-203ENST00000494993 QSOX2Q6ZRP7 698 aa20.71■□□□□ 0.91
HDDC3-203ENST00000494993 ABHD13Q7L211 337 aa20.71■□□□□ 0.91
HDDC3-203ENST00000494993 PNPLA5Q7Z6Z6 429 aaPredicted RBP20.71■□□□□ 0.91
HDDC3-203ENST00000494993 IGDCC3Q8IVU1 814 aa20.71■□□□□ 0.91
HDDC3-203ENST00000494993 SIAH3Q8IW03 269 aa20.71■□□□□ 0.91
HDDC3-203ENST00000494993 GPATCH11Q8N954 259 aa20.71■□□□□ 0.91
HDDC3-203ENST00000494993 UTP15Q8TED0 518 aaKnown RBP20.71■□□□□ 0.91
HDDC3-203ENST00000494993 PTCHD1Q96NR3 888 aa20.71■□□□□ 0.91
HDDC3-203ENST00000494993 PLAC1Q9HBJ0 212 aa20.71■□□□□ 0.91
HDDC3-203ENST00000494993 CORO1CQ9ULV4 474 aaPredicted RBP20.71■□□□□ 0.91
HDDC3-203ENST00000494993 SLC25A12O75746 678 aa20.7■□□□□ 0.9
HDDC3-203ENST00000494993 TPP2P29144 1249 aaPredicted RBP20.7■□□□□ 0.9
HDDC3-203ENST00000494993 REEP5Q00765 189 aa20.7■□□□□ 0.9
HDDC3-203ENST00000494993 BBS9Q3SYG4 887 aa20.7■□□□□ 0.9
HDDC3-203ENST00000494993 TEDDM1Q5T9Z0 273 aa20.7■□□□□ 0.9
HDDC3-203ENST00000494993 FAM45BPQ6NSW5 357 aa20.7■□□□□ 0.9
HDDC3-203ENST00000494993 CYP4X1Q8N118 509 aa20.7■□□□□ 0.9
HDDC3-203ENST00000494993 FAM45AQ8TCE6 357 aa20.7■□□□□ 0.9
HDDC3-203ENST00000494993 ADAMTS18Q8TE60 1221 aa20.7■□□□□ 0.9
HDDC3-203ENST00000494993 TSNARE1Q96NA8 513 aa20.7■□□□□ 0.9
HDDC3-203ENST00000494993 PHF12Q96QT6 1004 aa20.7■□□□□ 0.9
HDDC3-203ENST00000494993 OLFM1Q99784 485 aa20.7■□□□□ 0.9
HDDC3-203ENST00000494993 CLK4Q9HAZ1 481 aaKnown RBP20.7■□□□□ 0.9
HDDC3-203ENST00000494993 PPANQ9NQ55 473 aaKnown RBP20.7■□□□□ 0.9
HDDC3-203ENST00000494993 MEMO1Q9Y316 297 aa20.7■□□□□ 0.9
HDDC3-203ENST00000494993 VWA7Q9Y334 891 aa20.7■□□□□ 0.9
HDDC3-203ENST00000494993 SAGE2PA6NJ88 616 aa20.69■□□□□ 0.9
HDDC3-203ENST00000494993 ASNA1O43681 348 aa20.69■□□□□ 0.9
HDDC3-203ENST00000494993 NME2P1O60361 137 aa20.69■□□□□ 0.9
HDDC3-203ENST00000494993 PRMT3O60678 531 aa20.69■□□□□ 0.9
HDDC3-203ENST00000494993 NME2P22392 152 aa20.69■□□□□ 0.9
HDDC3-203ENST00000494993 BTG2P78543 158 aa20.69■□□□□ 0.9
HDDC3-203ENST00000494993 MAPKAPK3Q16644 382 aa20.69■□□□□ 0.9
HDDC3-203ENST00000494993 SBSNQ6UWP8 590 aa20.69■□□□□ 0.9
HDDC3-203ENST00000494993 GHDCQ8N2G8 530 aa20.69■□□□□ 0.9
HDDC3-203ENST00000494993 SLC35F6Q8N357 371 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms