RNA–Protein interactions for RNA: ENST00000494980.5

CHMP2B-205, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 3 BASIC

Gene CHMP2B, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-205ENST00000494980 NTNG2Q96CW9 530 aa13.39□□□□□ -0.27
CHMP2B-205ENST00000494980 PEX11GQ96HA9 241 aa13.39□□□□□ -0.27
CHMP2B-205ENST00000494980 TEKT5Q96M29 485 aa13.39□□□□□ -0.27
CHMP2B-205ENST00000494980 ANGPTL4Q9BY76 406 aa13.39□□□□□ -0.27
CHMP2B-205ENST00000494980 C12orf65Q9H3J6 166 aaKnown RBP13.39□□□□□ -0.27
CHMP2B-205ENST00000494980 MRPL47Q9HD33 250 aaKnown RBP13.39□□□□□ -0.27
CHMP2B-205ENST00000494980 TUBA8Q9NY65 449 aaPredicted RBP13.39□□□□□ -0.27
CHMP2B-205ENST00000494980 PCYOX1Q9UHG3 505 aa13.39□□□□□ -0.27
CHMP2B-205ENST00000494980 NINQ8N4C6 2090 aa13.39□□□□□ -0.27
CHMP2B-205ENST00000494980 IGKV1-8A0A0C4DH67 115 aa13.38□□□□□ -0.27
CHMP2B-205ENST00000494980 UBFD1O14562 309 aaKnown RBP13.38□□□□□ -0.27
CHMP2B-205ENST00000494980 SNPHO15079 494 aa13.38□□□□□ -0.27
CHMP2B-205ENST00000494980 ADAM11O75078 769 aa13.38□□□□□ -0.27
CHMP2B-205ENST00000494980 MATN4O95460 622 aa13.38□□□□□ -0.27
CHMP2B-205ENST00000494980 FTLP02792 175 aaPredicted RBP13.38□□□□□ -0.27
CHMP2B-205ENST00000494980 CNR1P21554 472 aa13.38□□□□□ -0.27
CHMP2B-205ENST00000494980 CPOXP36551 454 aa13.38□□□□□ -0.27
CHMP2B-205ENST00000494980 ZNF140P52738 457 aaPredicted RBP13.38□□□□□ -0.27
CHMP2B-205ENST00000494980 FAM47EQ6ZV65 393 aa13.38□□□□□ -0.27
CHMP2B-205ENST00000494980 GPALPP1Q8IXQ4 340 aa13.38□□□□□ -0.27
CHMP2B-205ENST00000494980 PIANPQ8IYJ0 282 aa13.38□□□□□ -0.27
CHMP2B-205ENST00000494980 PLD5Q8N7P1 536 aa13.38□□□□□ -0.27
CHMP2B-205ENST00000494980 NIPA2Q8N8Q9 360 aa13.38□□□□□ -0.27
CHMP2B-205ENST00000494980 ASB15Q8WXK1 588 aa13.38□□□□□ -0.27
CHMP2B-205ENST00000494980 MS4A3Q96HJ5 214 aa13.38□□□□□ -0.27
CHMP2B-205ENST00000494980 MARK4Q96L34 752 aa13.38□□□□□ -0.27
CHMP2B-205ENST00000494980 MED18Q9BUE0 208 aa13.38□□□□□ -0.27
CHMP2B-205ENST00000494980 FSD1LQ9BXM9 530 aa13.38□□□□□ -0.27
CHMP2B-205ENST00000494980 SLCO5A1Q9H2Y9 848 aa13.38□□□□□ -0.27
CHMP2B-205ENST00000494980 SH2D2AQ9NP31 389 aa13.38□□□□□ -0.27
CHMP2B-205ENST00000494980 SEMA4BQ9NPR2 832 aaPredicted RBP13.38□□□□□ -0.27
CHMP2B-205ENST00000494980 TAB2Q9NYJ8 693 aa13.38□□□□□ -0.27
CHMP2B-205ENST00000494980 C5orf60A6NFR6 353 aa13.37□□□□□ -0.27
CHMP2B-205ENST00000494980 PPP1R12AO14974 1030 aaPredicted RBP13.37□□□□□ -0.27
CHMP2B-205ENST00000494980 TPM2P07951 284 aa13.37□□□□□ -0.27
CHMP2B-205ENST00000494980 TMIGD3P0DMS9 266 aaPredicted RBP13.37□□□□□ -0.27
CHMP2B-205ENST00000494980 ZNF16P17020 682 aaPredicted RBP13.37□□□□□ -0.27
CHMP2B-205ENST00000494980 ITGA2P17301 1181 aa13.37□□□□□ -0.27
CHMP2B-205ENST00000494980 BDKRB1P46663 353 aa13.37□□□□□ -0.27
CHMP2B-205ENST00000494980 TRPC1P48995 793 aa13.37□□□□□ -0.27
CHMP2B-205ENST00000494980 HSPA14Q0VDF9 509 aa13.37□□□□□ -0.27
CHMP2B-205ENST00000494980 HYAL2Q12891 473 aa13.37□□□□□ -0.27
CHMP2B-205ENST00000494980 FOXF2Q12947 444 aa13.37□□□□□ -0.27
CHMP2B-205ENST00000494980 PDK1Q15118 436 aa13.37□□□□□ -0.27
CHMP2B-205ENST00000494980 ZNF750Q32MQ0 723 aa13.37□□□□□ -0.27
CHMP2B-205ENST00000494980 CCSMST1Q4G0I0 132 aa13.37□□□□□ -0.27
CHMP2B-205ENST00000494980 TCP11X2Q5H9J9 407 aa13.37□□□□□ -0.27
CHMP2B-205ENST00000494980 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.37□□□□□ -0.27
CHMP2B-205ENST00000494980 PLD6Q8N2A8 252 aaKnown RBP13.37□□□□□ -0.27
CHMP2B-205ENST00000494980 DEPDC4Q8N2C3 294 aa13.37□□□□□ -0.27
CHMP2B-205ENST00000494980 APCDD1LQ8NCL9 501 aa13.37□□□□□ -0.27
CHMP2B-205ENST00000494980 NEIL3Q8TAT5 605 aa13.37□□□□□ -0.27
CHMP2B-205ENST00000494980 HMGCLL1Q8TB92 370 aa13.37□□□□□ -0.27
CHMP2B-205ENST00000494980 TRIB1Q96RU8 372 aa13.37□□□□□ -0.27
CHMP2B-205ENST00000494980 SYT11Q9BT88 431 aa13.37□□□□□ -0.27
CHMP2B-205ENST00000494980 ZNF703Q9H7S9 590 aaPredicted RBP13.37□□□□□ -0.27
CHMP2B-205ENST00000494980 MRPS30Q9NP92 439 aaKnown RBP13.37□□□□□ -0.27
CHMP2B-205ENST00000494980 YARS2Q9Y2Z4 477 aaKnown RBP13.37□□□□□ -0.27
CHMP2B-205ENST00000494980 C15orf38-AP3S2A0A0A6YYH1 394 aa13.36□□□□□ -0.27
CHMP2B-205ENST00000494980 MBD3L3A6NE82 208 aaPredicted RBP13.36□□□□□ -0.27
CHMP2B-205ENST00000494980 ZNF860A6NHJ4 632 aa13.36□□□□□ -0.27
CHMP2B-205ENST00000494980 A8MUA0 341 aa13.36□□□□□ -0.27
CHMP2B-205ENST00000494980 TCF21O43680 179 aa13.36□□□□□ -0.27
CHMP2B-205ENST00000494980 OR2J2O76002 312 aa13.36□□□□□ -0.27
CHMP2B-205ENST00000494980 AGTP01019 485 aa13.36□□□□□ -0.27
CHMP2B-205ENST00000494980 PKMP14618 531 aaKnown RBP13.36□□□□□ -0.27
CHMP2B-205ENST00000494980 EZRP15311 586 aaKnown RBP13.36□□□□□ -0.27
CHMP2B-205ENST00000494980 IGFBP5P24593 272 aa13.36□□□□□ -0.27
CHMP2B-205ENST00000494980 SOX3P41225 446 aa13.36□□□□□ -0.27
CHMP2B-205ENST00000494980 ARHGAP25P42331 645 aa13.36□□□□□ -0.27
CHMP2B-205ENST00000494980 CLCN2P51788 898 aa13.36□□□□□ -0.27
CHMP2B-205ENST00000494980 RPS4XP62701 263 aaKnown RBP13.36□□□□□ -0.27
CHMP2B-205ENST00000494980 PDK2Q15119 407 aa13.36□□□□□ -0.27
CHMP2B-205ENST00000494980 DPCR1Q3MIW9 517 aa13.36□□□□□ -0.27
CHMP2B-205ENST00000494980 PRR31Q5SQ13 230 aa13.36□□□□□ -0.27
CHMP2B-205ENST00000494980 RNF187Q5TA31 235 aaPredicted RBP13.36□□□□□ -0.27
CHMP2B-205ENST00000494980 NPNTQ6UXI9 565 aa13.36□□□□□ -0.27
CHMP2B-205ENST00000494980 DNM1P46Q6ZS02 220 aa13.36□□□□□ -0.27
CHMP2B-205ENST00000494980 PDSS2Q86YH6 399 aa13.36□□□□□ -0.27
CHMP2B-205ENST00000494980 PLD3Q8IV08 490 aa13.36□□□□□ -0.27
CHMP2B-205ENST00000494980 RAB42Q8N4Z0 105 aa13.36□□□□□ -0.27
CHMP2B-205ENST00000494980 MBD3L2Q8NHZ7 208 aaPredicted RBP13.36□□□□□ -0.27
CHMP2B-205ENST00000494980 ZCCHC10Q8TBK6 192 aa13.36□□□□□ -0.27
CHMP2B-205ENST00000494980 OLFM3Q96PB7 478 aa13.36□□□□□ -0.27
CHMP2B-205ENST00000494980 OR1F2PQ96R84 312 aa13.36□□□□□ -0.27
CHMP2B-205ENST00000494980 AARSD1Q9BTE6 412 aaKnown RBP13.36□□□□□ -0.27
CHMP2B-205ENST00000494980 LIN28AQ9H9Z2 209 aaKnown RBP13.36□□□□□ -0.27
CHMP2B-205ENST00000494980 ARMCX1Q9P291 453 aa13.36□□□□□ -0.27
CHMP2B-205ENST00000494980 LAMP3Q9UQV4 416 aa13.36□□□□□ -0.27
CHMP2B-205ENST00000494980 PRR14LQ5THK1 2151 aa13.35□□□□□ -0.27
CHMP2B-205ENST00000494980 CD8B2A6NJW9 211 aa13.35□□□□□ -0.27
CHMP2B-205ENST00000494980 RFPL3SP0C7P2 107 aa13.35□□□□□ -0.27
CHMP2B-205ENST00000494980 CREB1P16220 341 aa13.35□□□□□ -0.27
CHMP2B-205ENST00000494980 MPP3Q13368 585 aa13.35□□□□□ -0.27
CHMP2B-205ENST00000494980 HADHQ16836 314 aaKnown RBP13.35□□□□□ -0.27
CHMP2B-205ENST00000494980 XKR6Q5GH73 641 aa13.35□□□□□ -0.27
CHMP2B-205ENST00000494980 ZNF425Q6IV72 752 aa13.35□□□□□ -0.27
CHMP2B-205ENST00000494980 TTC23LQ6PF05 361 aa13.35□□□□□ -0.27
CHMP2B-205ENST00000494980 MAP7D3Q8IWC1 876 aa13.35□□□□□ -0.27
CHMP2B-205ENST00000494980 C9orf106Q8NAJ2 232 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms