RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 APCP25054 2843 aa21.82■■□□□ 1.08
COL27A1-208ENST00000494780 DNALI1O14645 258 aaPredicted RBP21.82■■□□□ 1.08
COL27A1-208ENST00000494780 CHST10O43529 356 aa21.82■■□□□ 1.08
COL27A1-208ENST00000494780 ENO2P09104 434 aaPredicted RBP21.82■■□□□ 1.08
COL27A1-208ENST00000494780 ESRRAP11474 423 aaPredicted RBP21.82■■□□□ 1.08
COL27A1-208ENST00000494780 AGAP20933 346 aa21.82■■□□□ 1.08
COL27A1-208ENST00000494780 OC90Q02509 493 aaPredicted RBP21.82■■□□□ 1.08
COL27A1-208ENST00000494780 RGS1Q08116 209 aa21.82■■□□□ 1.08
COL27A1-208ENST00000494780 SLC25A25Q6KCM7 469 aa21.82■■□□□ 1.08
COL27A1-208ENST00000494780 Q6ZPB1 254 aaPredicted RBP21.82■■□□□ 1.08
COL27A1-208ENST00000494780 ABHD13Q7L211 337 aa21.82■■□□□ 1.08
COL27A1-208ENST00000494780 FRMD6Q96NE9 622 aa21.82■■□□□ 1.08
COL27A1-208ENST00000494780 CDCP1Q9H5V8 836 aa21.82■■□□□ 1.08
COL27A1-208ENST00000494780 CLK4Q9HAZ1 481 aaKnown RBP21.82■■□□□ 1.08
COL27A1-208ENST00000494780 ASIC3Q9UHC3 531 aa21.82■■□□□ 1.08
COL27A1-208ENST00000494780 ZFP69BQ9UJL9 534 aa21.82■■□□□ 1.08
COL27A1-208ENST00000494780 CORO1CQ9ULV4 474 aaPredicted RBP21.82■■□□□ 1.08
COL27A1-208ENST00000494780 CSMD1Q96PZ7 3565 aa21.82■■□□□ 1.08
COL27A1-208ENST00000494780 NDC80O14777 642 aa21.81■■□□□ 1.08
COL27A1-208ENST00000494780 BANF1O75531 89 aa21.81■■□□□ 1.08
COL27A1-208ENST00000494780 NEURL1O76050 574 aa21.81■■□□□ 1.08
COL27A1-208ENST00000494780 SERPIND1P05546 499 aa21.81■■□□□ 1.08
COL27A1-208ENST00000494780 SP1P08047 785 aa21.81■■□□□ 1.08
COL27A1-208ENST00000494780 AHRP35869 848 aa21.81■■□□□ 1.08
COL27A1-208ENST00000494780 SCTRP47872 440 aa21.81■■□□□ 1.08
COL27A1-208ENST00000494780 ST13P50502 369 aaKnown RBP21.81■■□□□ 1.08
COL27A1-208ENST00000494780 SMSP52788 366 aa21.81■■□□□ 1.08
COL27A1-208ENST00000494780 ADORA2A-AS1P86434 159 aa21.81■■□□□ 1.08
COL27A1-208ENST00000494780 CSHL1Q14406 222 aa21.81■■□□□ 1.08
COL27A1-208ENST00000494780 MSS51Q4VC12 460 aa21.81■■□□□ 1.08
COL27A1-208ENST00000494780 CATSPEREQ5SY80 951 aa21.81■■□□□ 1.08
COL27A1-208ENST00000494780 TEDDM1Q5T9Z0 273 aa21.81■■□□□ 1.08
COL27A1-208ENST00000494780 HECTD2Q5U5R9 776 aa21.81■■□□□ 1.08
COL27A1-208ENST00000494780 GALNTL5Q7Z4T8 443 aa21.81■■□□□ 1.08
COL27A1-208ENST00000494780 RPS19BP1Q86WX3 136 aaKnown RBP21.81■■□□□ 1.08
COL27A1-208ENST00000494780 SPPL2CQ8IUH8 684 aa21.81■■□□□ 1.08
COL27A1-208ENST00000494780 SLC5A11Q8WWX8 675 aa21.81■■□□□ 1.08
COL27A1-208ENST00000494780 NEIL2Q969S2 332 aa21.81■■□□□ 1.08
COL27A1-208ENST00000494780 LRFN1Q9P244 771 aa21.81■■□□□ 1.08
COL27A1-208ENST00000494780 TINAGQ9UJW2 476 aa21.81■■□□□ 1.08
COL27A1-208ENST00000494780 VWA7Q9Y334 891 aa21.81■■□□□ 1.08
COL27A1-208ENST00000494780 NPIPA5E9PKD4 350 aa21.8■■□□□ 1.08
COL27A1-208ENST00000494780 DNAJB6O75190 326 aa21.8■■□□□ 1.08
COL27A1-208ENST00000494780 ZNF888P0CJ79 500 aaPredicted RBP21.8■■□□□ 1.08
COL27A1-208ENST00000494780 COX6B1P14854 86 aa21.8■■□□□ 1.08
COL27A1-208ENST00000494780 OLR1P78380 273 aa21.8■■□□□ 1.08
COL27A1-208ENST00000494780 BBS9Q3SYG4 887 aa21.8■■□□□ 1.08
COL27A1-208ENST00000494780 FAM45BPQ6NSW5 357 aa21.8■■□□□ 1.08
COL27A1-208ENST00000494780 QSOX2Q6ZRP7 698 aa21.8■■□□□ 1.08
COL27A1-208ENST00000494780 GDF7Q7Z4P5 450 aa21.8■■□□□ 1.08
COL27A1-208ENST00000494780 IGDCC3Q8IVU1 814 aa21.8■■□□□ 1.08
COL27A1-208ENST00000494780 SIAH3Q8IW03 269 aa21.8■■□□□ 1.08
COL27A1-208ENST00000494780 GPATCH11Q8N954 259 aa21.8■■□□□ 1.08
COL27A1-208ENST00000494780 FAM45AQ8TCE6 357 aa21.8■■□□□ 1.08
COL27A1-208ENST00000494780 PDLIM5Q96HC4 596 aaKnown RBP21.8■■□□□ 1.08
COL27A1-208ENST00000494780 PTCHD1Q96NR3 888 aa21.8■■□□□ 1.08
COL27A1-208ENST00000494780 TSPAN10Q9H1Z9 355 aaPredicted RBP21.8■■□□□ 1.08
COL27A1-208ENST00000494780 PPANQ9NQ55 473 aaKnown RBP21.8■■□□□ 1.08
COL27A1-208ENST00000494780 NPIPA1Q9UND3 350 aa21.8■■□□□ 1.08
COL27A1-208ENST00000494780 URADA6NGE7 173 aa21.79■■□□□ 1.08
COL27A1-208ENST00000494780 PRMT3O60678 531 aa21.79■■□□□ 1.08
COL27A1-208ENST00000494780 B4GALT2O60909 372 aa21.79■■□□□ 1.08
COL27A1-208ENST00000494780 GUCA1CO95843 209 aa21.79■■□□□ 1.08
COL27A1-208ENST00000494780 B3GALT4O96024 378 aa21.79■■□□□ 1.08
COL27A1-208ENST00000494780 PNPLA5Q7Z6Z6 429 aaPredicted RBP21.79■■□□□ 1.08
COL27A1-208ENST00000494780 KIF2BQ8N4N8 673 aa21.79■■□□□ 1.08
COL27A1-208ENST00000494780 ADAMTS18Q8TE60 1221 aa21.79■■□□□ 1.08
COL27A1-208ENST00000494780 UTP15Q8TED0 518 aaKnown RBP21.79■■□□□ 1.08
COL27A1-208ENST00000494780 SLCO2A1Q92959 643 aa21.79■■□□□ 1.08
COL27A1-208ENST00000494780 SPNS1Q9H2V7 528 aa21.79■■□□□ 1.08
COL27A1-208ENST00000494780 PELI2Q9HAT8 420 aa21.79■■□□□ 1.08
COL27A1-208ENST00000494780 PLAC1Q9HBJ0 212 aa21.79■■□□□ 1.08
COL27A1-208ENST00000494780 SLC17A6Q9P2U8 582 aa21.79■■□□□ 1.08
COL27A1-208ENST00000494780 CES2O00748 559 aa21.78■■□□□ 1.08
COL27A1-208ENST00000494780 ASNA1O43681 348 aa21.78■■□□□ 1.08
COL27A1-208ENST00000494780 TPP2P29144 1249 aaPredicted RBP21.78■■□□□ 1.08
COL27A1-208ENST00000494780 PGGT1BP53609 377 aa21.78■■□□□ 1.08
COL27A1-208ENST00000494780 REEP5Q00765 189 aa21.78■■□□□ 1.08
COL27A1-208ENST00000494780 ZNF468Q5VIY5 522 aaPredicted RBP21.78■■□□□ 1.08
COL27A1-208ENST00000494780 CYP4X1Q8N118 509 aa21.78■■□□□ 1.08
COL27A1-208ENST00000494780 SLC35F6Q8N357 371 aa21.78■■□□□ 1.08
COL27A1-208ENST00000494780 TRPV3Q8NET8 790 aa21.78■■□□□ 1.08
COL27A1-208ENST00000494780 OLFM1Q99784 485 aa21.78■■□□□ 1.08
COL27A1-208ENST00000494780 SLC6A16Q9GZN6 736 aa21.78■■□□□ 1.08
COL27A1-208ENST00000494780 TRIM45Q9H8W5 580 aaPredicted RBP21.78■■□□□ 1.08
COL27A1-208ENST00000494780 MEMO1Q9Y316 297 aa21.78■■□□□ 1.08
COL27A1-208ENST00000494780 DYRK1BQ9Y463 629 aa21.78■■□□□ 1.08
COL27A1-208ENST00000494780 PCNX1Q96RV3 2341 aa21.77■■□□□ 1.08
COL27A1-208ENST00000494780 NCOA6Q14686 2063 aaPredicted RBP21.77■■□□□ 1.08
COL27A1-208ENST00000494780 SAGE2PA6NJ88 616 aa21.77■■□□□ 1.08
COL27A1-208ENST00000494780 NME2P1O60361 137 aa21.77■■□□□ 1.08
COL27A1-208ENST00000494780 SLC25A12O75746 678 aa21.77■■□□□ 1.08
COL27A1-208ENST00000494780 RNH1P13489 461 aaKnown RBP21.77■■□□□ 1.08
COL27A1-208ENST00000494780 NME2P22392 152 aa21.77■■□□□ 1.08
COL27A1-208ENST00000494780 CYB561P49447 251 aa21.77■■□□□ 1.08
COL27A1-208ENST00000494780 MLF1P58340 268 aa21.77■■□□□ 1.08
COL27A1-208ENST00000494780 BTG2P78543 158 aa21.77■■□□□ 1.08
COL27A1-208ENST00000494780 MAPKAPK3Q16644 382 aa21.77■■□□□ 1.08
COL27A1-208ENST00000494780 SBSNQ6UWP8 590 aa21.77■■□□□ 1.08
COL27A1-208ENST00000494780 PDIK1LQ8N165 341 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms