RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 PLEKHO1Q53GL0 409 aaPredicted RBP2.11□□□□□ -2.07
PTPN12-212ENST00000494248 SOWAHCQ53LP3 525 aaPredicted RBP2.11□□□□□ -2.07
PTPN12-212ENST00000494248 SPANXN2Q5MJ10 180 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 PHYHD1Q5SRE7 291 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 RARS2Q5T160 578 aaKnown RBP2.11□□□□□ -2.07
PTPN12-212ENST00000494248 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.11□□□□□ -2.07
PTPN12-212ENST00000494248 SPOUT1Q5T280 376 aaKnown RBP2.11□□□□□ -2.07
PTPN12-212ENST00000494248 ACSM2BQ68CK6 577 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 KCTD11Q693B1 232 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 TBC1D3GQ6DHY5 549 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 CLEC6AQ6EIG7 209 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 PTRHD1Q6GMV3 140 aaKnown RBP2.11□□□□□ -2.07
PTPN12-212ENST00000494248 DHRS7BQ6IAN0 325 aaPredicted RBP2.11□□□□□ -2.07
PTPN12-212ENST00000494248 TBC1D3CQ6IPX1 549 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 C17orf99Q6UX52 265 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 TMEM182Q6ZP80 229 aaPredicted RBP2.11□□□□□ -2.07
PTPN12-212ENST00000494248 TPGS1Q6ZTW0 290 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 TRMT10CQ7L0Y3 403 aaKnown RBP2.11□□□□□ -2.07
PTPN12-212ENST00000494248 MON1BQ7L1V2 547 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 GPR142Q7Z601 462 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 KIAA1328Q86T90 577 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 VPS36Q86VN1 386 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 NRROSQ86YC3 692 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 GRAMD2AQ8IUY3 354 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 CCDC60Q8IWA6 550 aaPredicted RBP2.11□□□□□ -2.07
PTPN12-212ENST00000494248 HACE1Q8IYU2 909 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 ADGRF3Q8IZF5 1079 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 TBC1D3Q8IZP1 549 aaPredicted RBP2.11□□□□□ -2.07
PTPN12-212ENST00000494248 CENPLQ8N0S6 344 aaPredicted RBP2.11□□□□□ -2.07
PTPN12-212ENST00000494248 GHDCQ8N2G8 530 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 RNF148Q8N7C7 305 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 NECAB1Q8N987 351 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 CCDC63Q8NA47 563 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 POC1AQ8NBT0 407 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 CLEC1AQ8NC01 280 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 FAM71CQ8NEG0 241 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 ZNF397Q8NF99 534 aaPredicted RBP2.11□□□□□ -2.07
PTPN12-212ENST00000494248 BPIFCQ8NFQ6 507 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 OR52B4Q8NGK2 314 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 OR8J1Q8NGP2 316 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 SLC2A14Q8TDB8 520 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 CCDC12Q8WUD4 166 aaPredicted RBP2.11□□□□□ -2.07
PTPN12-212ENST00000494248 HEXDCQ8WVB3 486 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 ROBO4Q8WZ75 1007 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 KIFAP3Q92845 792 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 MCUR1Q96AQ8 359 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 SPSB1Q96BD6 273 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 MOAP1Q96BY2 351 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 RHBDF1Q96CC6 855 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 C12orf66Q96MD2 445 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 RPRD1AQ96P16 312 aaPredicted RBP2.11□□□□□ -2.07
PTPN12-212ENST00000494248 DUX3Q96PT4 197 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 PANX3Q96QZ0 392 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 CDRT15Q96T59 188 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 CYTH2Q99418 400 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 C19orf43Q9BQ61 176 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 C11orf70Q9BRQ4 267 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 SLC25A33Q9BSK2 321 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 HAUS8Q9BT25 410 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 H2AFJQ9BTM1 129 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 ABHD6Q9BV23 337 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 KATNB1Q9BVA0 655 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 IFIH1Q9BYX4 1025 aaKnown RBP2.11□□□□□ -2.07
PTPN12-212ENST00000494248 ADNPQ9H2P0 1102 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 TMEM245Q9H330 911 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 FZD8Q9H461 694 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 MINDY3Q9H8M7 445 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 FN3KRPQ9HA64 309 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 TRPC7Q9HCX4 862 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 RANGRFQ9HD47 186 aaPredicted RBP2.11□□□□□ -2.07
PTPN12-212ENST00000494248 FAM207AQ9NSI2 230 aaPredicted RBP2.11□□□□□ -2.07
PTPN12-212ENST00000494248 THAP1Q9NVV9 213 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 SLCO1C1Q9NYB5 712 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 TRPC5Q9UL62 973 aaPredicted RBP2.11□□□□□ -2.07
PTPN12-212ENST00000494248 A4GNTQ9UNA3 340 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 PLA2G4CQ9UP65 541 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 SLC12A4Q9UP95 1085 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 PLCL2Q9UPR0 1127 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 MGAT4BQ9UQ53 548 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 ZNF148Q9UQR1 794 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 SRPRBQ9Y5M8 271 aaKnown RBP2.11□□□□□ -2.07
PTPN12-212ENST00000494248 RNF215Q9Y6U7 377 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 PFASO15067 1338 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 CFAP65Q6ZU64 1925 aaKnown RBP2.11□□□□□ -2.07
PTPN12-212ENST00000494248 KANK1Q14678 1352 aa2.1□□□□□ -2.07
PTPN12-212ENST00000494248 IGKV3D-20A0A0C4DH25 116 aa2.1□□□□□ -2.07
PTPN12-212ENST00000494248 BTBD17A6NE02 478 aa2.1□□□□□ -2.07
PTPN12-212ENST00000494248 MEI4A8MW99 385 aa2.1□□□□□ -2.07
PTPN12-212ENST00000494248 TCP11X1B4DZS4 312 aa2.1□□□□□ -2.07
PTPN12-212ENST00000494248 SUPT3HB4E1H0 165 aa2.1□□□□□ -2.07
PTPN12-212ENST00000494248 USP17L23D6RBM5 183 aa2.1□□□□□ -2.07
PTPN12-212ENST00000494248 M0QYT0 321 aa2.1□□□□□ -2.07
PTPN12-212ENST00000494248 ZNF701M0R085 212 aaPredicted RBP2.1□□□□□ -2.07
PTPN12-212ENST00000494248 ZNF197O14709 1029 aa2.1□□□□□ -2.07
PTPN12-212ENST00000494248 MAP2K7O14733 419 aa2.1□□□□□ -2.07
PTPN12-212ENST00000494248 HDAC3O15379 428 aa2.1□□□□□ -2.07
PTPN12-212ENST00000494248 MAGEB2O15479 319 aa2.1□□□□□ -2.07
PTPN12-212ENST00000494248 ZNF264O43296 627 aa2.1□□□□□ -2.07
PTPN12-212ENST00000494248 ARHGEF9O43307 516 aa2.1□□□□□ -2.07
PTPN12-212ENST00000494248 AKR7A2O43488 359 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms