RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 PHLDB2Q86SQ0 1253 aa3.41□□□□□ -1.86
ITGB1-216ENST00000493758 CARM1Q86X55 608 aa3.41□□□□□ -1.86
ITGB1-216ENST00000493758 MARCH9Q86YJ5 346 aa3.41□□□□□ -1.86
ITGB1-216ENST00000493758 FAM219AQ8IW50 185 aa3.41□□□□□ -1.86
ITGB1-216ENST00000493758 DND1Q8IYX4 353 aaKnown RBP3.41□□□□□ -1.86
ITGB1-216ENST00000493758 LINC00612Q8N6U2 182 aa3.41□□□□□ -1.86
ITGB1-216ENST00000493758 CCDC185Q8N715 623 aa3.41□□□□□ -1.86
ITGB1-216ENST00000493758 ERP27Q96DN0 273 aa3.41□□□□□ -1.86
ITGB1-216ENST00000493758 AK8Q96MA6 479 aa3.41□□□□□ -1.86
ITGB1-216ENST00000493758 OCR1Q9BZK8 76 aa3.41□□□□□ -1.86
ITGB1-216ENST00000493758 C10orf88Q9H8K7 445 aa3.41□□□□□ -1.86
ITGB1-216ENST00000493758 PFDN4Q9NQP4 134 aa3.41□□□□□ -1.86
ITGB1-216ENST00000493758 TP53TG3Q9ULZ0 132 aa3.41□□□□□ -1.86
ITGB1-216ENST00000493758 MRPS18CQ9Y3D5 142 aaKnown RBP3.41□□□□□ -1.86
ITGB1-216ENST00000493758 TRAV18A0A075B6X5 111 aa3.4□□□□□ -1.87
ITGB1-216ENST00000493758 A0A0B4J203 849 aa3.4□□□□□ -1.87
ITGB1-216ENST00000493758 SRRM5B3KS81 715 aa3.4□□□□□ -1.87
ITGB1-216ENST00000493758 H7C0S8 307 aa3.4□□□□□ -1.87
ITGB1-216ENST00000493758 DIAPH2O60879 1101 aa3.4□□□□□ -1.87
ITGB1-216ENST00000493758 PCP11498 1178 aaKnown RBP3.4□□□□□ -1.87
ITGB1-216ENST00000493758 COX10Q12887 443 aa3.4□□□□□ -1.87
ITGB1-216ENST00000493758 PPA1Q15181 289 aa3.4□□□□□ -1.87
ITGB1-216ENST00000493758 ALDH1L2Q3SY69 923 aa3.4□□□□□ -1.87
ITGB1-216ENST00000493758 ZNF841Q6ZN19 808 aa3.4□□□□□ -1.87
ITGB1-216ENST00000493758 C15orf52Q6ZUT6 534 aaKnown RBP3.4□□□□□ -1.87
ITGB1-216ENST00000493758 SH2D6Q7Z4S9 175 aa3.4□□□□□ -1.87
ITGB1-216ENST00000493758 RNF130Q86XS8 419 aa3.4□□□□□ -1.87
ITGB1-216ENST00000493758 APCDD1Q8J025 514 aa3.4□□□□□ -1.87
ITGB1-216ENST00000493758 OR9Q2Q8NGE9 314 aa3.4□□□□□ -1.87
ITGB1-216ENST00000493758 CHCHD5Q9BSY4 110 aa3.4□□□□□ -1.87
ITGB1-216ENST00000493758 FAM129AQ9BZQ8 928 aa3.4□□□□□ -1.87
ITGB1-216ENST00000493758 POLKQ9UBT6 870 aa3.4□□□□□ -1.87
ITGB1-216ENST00000493758 KLK11Q9UBX7 282 aa3.4□□□□□ -1.87
ITGB1-216ENST00000493758 ANAPC5Q9UJX4 755 aa3.4□□□□□ -1.87
ITGB1-216ENST00000493758 ARID2Q68CP9 1835 aa3.4□□□□□ -1.87
ITGB1-216ENST00000493758 H3BMM5 538 aa3.39□□□□□ -1.87
ITGB1-216ENST00000493758 TNFSF12O43508 249 aa3.39□□□□□ -1.87
ITGB1-216ENST00000493758 TIMM44O43615 452 aa3.39□□□□□ -1.87
ITGB1-216ENST00000493758 MOCS2O96007 188 aaPredicted RBP3.39□□□□□ -1.87
ITGB1-216ENST00000493758 AOC1P19801 751 aa3.39□□□□□ -1.87
ITGB1-216ENST00000493758 ITIH1P19827 911 aa3.39□□□□□ -1.87
ITGB1-216ENST00000493758 CRYBA2P53672 197 aa3.39□□□□□ -1.87
ITGB1-216ENST00000493758 ABCE1P61221 599 aaKnown RBP3.39□□□□□ -1.87
ITGB1-216ENST00000493758 TFCP2Q12800 502 aa3.39□□□□□ -1.87
ITGB1-216ENST00000493758 DHRS11Q6UWP2 260 aa3.39□□□□□ -1.87
ITGB1-216ENST00000493758 SPPL2AQ8TCT8 520 aa3.39□□□□□ -1.87
ITGB1-216ENST00000493758 HEXDCQ8WVB3 486 aa3.39□□□□□ -1.87
ITGB1-216ENST00000493758 TOMM40LQ969M1 308 aa3.39□□□□□ -1.87
ITGB1-216ENST00000493758 NXPE2Q96DL1 559 aa3.39□□□□□ -1.87
ITGB1-216ENST00000493758 PDLIM5Q96HC4 596 aaKnown RBP3.39□□□□□ -1.87
ITGB1-216ENST00000493758 TSSK2Q96PF2 358 aa3.39□□□□□ -1.87
ITGB1-216ENST00000493758 NEDD4LQ96PU5 975 aa3.39□□□□□ -1.87
ITGB1-216ENST00000493758 ALKBH7Q9BT30 221 aaPredicted RBP3.39□□□□□ -1.87
ITGB1-216ENST00000493758 PAPOLGQ9BWT3 736 aaKnown RBP3.39□□□□□ -1.87
ITGB1-216ENST00000493758 HEXA-AS1Q9H8Q6 139 aa3.39□□□□□ -1.87
ITGB1-216ENST00000493758 TERF2IPQ9NYB0 399 aa3.39□□□□□ -1.87
ITGB1-216ENST00000493758 PILRAQ9UKJ1 303 aa3.39□□□□□ -1.87
ITGB1-216ENST00000493758 COLEC10Q9Y6Z7 277 aa3.39□□□□□ -1.87
ITGB1-216ENST00000493758 ARHGEF33A8MVX0 844 aa3.38□□□□□ -1.87
ITGB1-216ENST00000493758 MAGEB2O15479 319 aa3.38□□□□□ -1.87
ITGB1-216ENST00000493758 PPIP5K2O43314 1243 aa3.38□□□□□ -1.87
ITGB1-216ENST00000493758 POP4O95707 220 aaKnown RBP3.38□□□□□ -1.87
ITGB1-216ENST00000493758 GBAP04062 536 aa3.38□□□□□ -1.87
ITGB1-216ENST00000493758 RPLP0P05388 317 aaKnown RBP3.38□□□□□ -1.87
ITGB1-216ENST00000493758 BCL3P20749 454 aa3.38□□□□□ -1.87
ITGB1-216ENST00000493758 PTENP60484 403 aa3.38□□□□□ -1.87
ITGB1-216ENST00000493758 SRPXP78539 464 aa3.38□□□□□ -1.87
ITGB1-216ENST00000493758 FCHO2Q0JRZ9 810 aa3.38□□□□□ -1.87
ITGB1-216ENST00000493758 C15orf32Q32M92 178 aa3.38□□□□□ -1.87
ITGB1-216ENST00000493758 SLC25A30Q5SVS4 291 aa3.38□□□□□ -1.87
ITGB1-216ENST00000493758 FGFRL1Q8N441 504 aa3.38□□□□□ -1.87
ITGB1-216ENST00000493758 RPLP0P6Q8NHW5 317 aa3.38□□□□□ -1.87
ITGB1-216ENST00000493758 ATP8B4Q8TF62 1192 aa3.38□□□□□ -1.87
ITGB1-216ENST00000493758 ZNF597Q96LX8 424 aa3.38□□□□□ -1.87
ITGB1-216ENST00000493758 PCDHB18PQ96TA0 734 aa3.38□□□□□ -1.87
ITGB1-216ENST00000493758 PUS3Q9BZE2 481 aaKnown RBP3.38□□□□□ -1.87
ITGB1-216ENST00000493758 TMX4Q9H1E5 349 aaPredicted RBP3.38□□□□□ -1.87
ITGB1-216ENST00000493758 JPT2Q9H910 190 aa3.38□□□□□ -1.87
ITGB1-216ENST00000493758 CHCHD3Q9NX63 227 aaKnown RBP3.38□□□□□ -1.87
ITGB1-216ENST00000493758 RARRES3Q9UL19 164 aa3.38□□□□□ -1.87
ITGB1-216ENST00000493758 SERINC4A6NH21 518 aa3.37□□□□□ -1.87
ITGB1-216ENST00000493758 PRSS46E5RG02 174 aa3.37□□□□□ -1.87
ITGB1-216ENST00000493758 FAM86B1E9PN63 330 aa3.37□□□□□ -1.87
ITGB1-216ENST00000493758 SLC30A4O14863 429 aa3.37□□□□□ -1.87
ITGB1-216ENST00000493758 LRCH4O75427 683 aa3.37□□□□□ -1.87
ITGB1-216ENST00000493758 ZFYP08048 801 aaPredicted RBP3.37□□□□□ -1.87
ITGB1-216ENST00000493758 FAM86B2P0C5J1 330 aa3.37□□□□□ -1.87
ITGB1-216ENST00000493758 FAM58BPP0C7Q3 252 aa3.37□□□□□ -1.87
ITGB1-216ENST00000493758 GIFP27352 417 aa3.37□□□□□ -1.87
ITGB1-216ENST00000493758 OXTRP30559 389 aa3.37□□□□□ -1.87
ITGB1-216ENST00000493758 FCGR2BP31994 310 aaPredicted RBP3.37□□□□□ -1.87
ITGB1-216ENST00000493758 FCGR2CP31995 323 aa3.37□□□□□ -1.87
ITGB1-216ENST00000493758 CSRP3P50461 194 aa3.37□□□□□ -1.87
ITGB1-216ENST00000493758 RPP38P78345 283 aaKnown RBP3.37□□□□□ -1.87
ITGB1-216ENST00000493758 MLF2Q15773 248 aaPredicted RBP3.37□□□□□ -1.87
ITGB1-216ENST00000493758 TCEAL6Q6IPX3 200 aa3.37□□□□□ -1.87
ITGB1-216ENST00000493758 TRAT1Q6PIZ9 186 aa3.37□□□□□ -1.87
ITGB1-216ENST00000493758 TMEM182Q6ZP80 229 aaPredicted RBP3.37□□□□□ -1.87
ITGB1-216ENST00000493758 Q6ZVQ6 151 aa3.37□□□□□ -1.87
ITGB1-216ENST00000493758 TRMT11Q7Z4G4 463 aaKnown RBP3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms