RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 FOXM1Q08050 763 aa11.85□□□□□ -0.51
SNX17-208ENST00000493711 DDX39BQ13838 428 aaKnown RBP11.85□□□□□ -0.51
SNX17-208ENST00000493711 FAM53BQ14153 422 aa11.85□□□□□ -0.51
SNX17-208ENST00000493711 ABRAXAS2Q15018 415 aa11.85□□□□□ -0.51
SNX17-208ENST00000493711 HERC3Q15034 1050 aa11.85□□□□□ -0.51
SNX17-208ENST00000493711 GPR19Q15760 415 aa11.85□□□□□ -0.51
SNX17-208ENST00000493711 MUM1Q2TAK8 710 aa11.85□□□□□ -0.51
SNX17-208ENST00000493711 SMU1Q2TAY7 513 aa11.85□□□□□ -0.51
SNX17-208ENST00000493711 PRTGQ2VWP7 1150 aa11.85□□□□□ -0.51
SNX17-208ENST00000493711 ADPRMQ3LIE5 342 aa11.85□□□□□ -0.51
SNX17-208ENST00000493711 SGO1Q5FBB7 561 aa11.85□□□□□ -0.51
SNX17-208ENST00000493711 DEPDC1Q5TB30 811 aa11.85□□□□□ -0.51
SNX17-208ENST00000493711 KHDRBS2Q5VWX1 349 aaKnown RBP11.85□□□□□ -0.51
SNX17-208ENST00000493711 FRMPD2BQ6IN97 320 aa11.85□□□□□ -0.51
SNX17-208ENST00000493711 CEACAM20Q6UY09 585 aa11.85□□□□□ -0.51
SNX17-208ENST00000493711 TMPRSS7Q7RTY8 843 aa11.85□□□□□ -0.51
SNX17-208ENST00000493711 PAGE2Q7Z2X7 111 aa11.85□□□□□ -0.51
SNX17-208ENST00000493711 DDIASQ8IXT1 998 aa11.85□□□□□ -0.51
SNX17-208ENST00000493711 OR4N4Q8N0Y3 316 aa11.85□□□□□ -0.51
SNX17-208ENST00000493711 OR2L5Q8NG80 312 aa11.85□□□□□ -0.51
SNX17-208ENST00000493711 AGR3Q8TD06 166 aa11.85□□□□□ -0.51
SNX17-208ENST00000493711 GAL3ST3Q96A11 431 aa11.85□□□□□ -0.51
SNX17-208ENST00000493711 RGMAQ96B86 450 aa11.85□□□□□ -0.51
SNX17-208ENST00000493711 C19orf60Q96EN9 201 aa11.85□□□□□ -0.51
SNX17-208ENST00000493711 MVB12AQ96EY5 273 aa11.85□□□□□ -0.51
SNX17-208ENST00000493711 PPP3R2Q96LZ3 170 aa11.85□□□□□ -0.51
SNX17-208ENST00000493711 ZNF317Q96PQ6 595 aaPredicted RBP11.85□□□□□ -0.51
SNX17-208ENST00000493711 OR6C1Q96RD1 312 aa11.85□□□□□ -0.51
SNX17-208ENST00000493711 TAAR9Q96RI9 348 aa11.85□□□□□ -0.51
SNX17-208ENST00000493711 KCNA7Q96RP8 456 aa11.85□□□□□ -0.51
SNX17-208ENST00000493711 MTERF1Q99551 399 aaKnown RBP11.85□□□□□ -0.51
SNX17-208ENST00000493711 TBCDQ9BTW9 1192 aa11.85□□□□□ -0.51
SNX17-208ENST00000493711 NDC1Q9BTX1 674 aa11.85□□□□□ -0.51
SNX17-208ENST00000493711 DDA1Q9BW61 102 aa11.85□□□□□ -0.51
SNX17-208ENST00000493711 MS4A8Q9BY19 250 aa11.85□□□□□ -0.51
SNX17-208ENST00000493711 SLC6A16Q9GZN6 736 aa11.85□□□□□ -0.51
SNX17-208ENST00000493711 TNFRSF12AQ9NP84 129 aa11.85□□□□□ -0.51
SNX17-208ENST00000493711 PNPOQ9NVS9 261 aa11.85□□□□□ -0.51
SNX17-208ENST00000493711 SLC39A1Q9NY26 324 aa11.85□□□□□ -0.51
SNX17-208ENST00000493711 VPS29Q9UBQ0 182 aa11.85□□□□□ -0.51
SNX17-208ENST00000493711 ADAM21Q9UKJ8 722 aa11.85□□□□□ -0.51
SNX17-208ENST00000493711 CDC14AQ9UNH5 594 aa11.85□□□□□ -0.51
SNX17-208ENST00000493711 SLC12A4Q9UP95 1085 aa11.85□□□□□ -0.51
SNX17-208ENST00000493711 FIS1Q9Y3D6 152 aa11.85□□□□□ -0.51
SNX17-208ENST00000493711 PCDHB3Q9Y5E6 796 aa11.85□□□□□ -0.51
SNX17-208ENST00000493711 LRIT2A6NDA9 550 aa11.84□□□□□ -0.51
SNX17-208ENST00000493711 TMEM233B4DJY2 109 aa11.84□□□□□ -0.51
SNX17-208ENST00000493711 PIP5K1BO14986 540 aa11.84□□□□□ -0.51
SNX17-208ENST00000493711 NRP2O60462 931 aa11.84□□□□□ -0.51
SNX17-208ENST00000493711 ALOX15P16050 662 aaPredicted RBP11.84□□□□□ -0.51
SNX17-208ENST00000493711 PRPH2P23942 346 aa11.84□□□□□ -0.51
SNX17-208ENST00000493711 SERPINB3P29508 390 aa11.84□□□□□ -0.51
SNX17-208ENST00000493711 NEK2P51955 445 aa11.84□□□□□ -0.51
SNX17-208ENST00000493711 RAP1GDS1P52306 607 aa11.84□□□□□ -0.51
SNX17-208ENST00000493711 GYS2P54840 703 aa11.84□□□□□ -0.51
SNX17-208ENST00000493711 RPS13P62277 151 aaKnown RBP11.84□□□□□ -0.51
SNX17-208ENST00000493711 CYP4F2P78329 520 aa11.84□□□□□ -0.51
SNX17-208ENST00000493711 TARDBPQ13148 414 aaKnown RBP eCLIP11.84□□□□□ -0.51
SNX17-208ENST00000493711 MAD2L1Q13257 205 aaPredicted RBP11.84□□□□□ -0.51
SNX17-208ENST00000493711 KCNAB1Q14722 419 aa11.84□□□□□ -0.51
SNX17-208ENST00000493711 DEFB110Q30KQ9 67 aa11.84□□□□□ -0.51
SNX17-208ENST00000493711 SPIN4Q56A73 249 aa11.84□□□□□ -0.51
SNX17-208ENST00000493711 XKR7Q5GH72 579 aa11.84□□□□□ -0.51
SNX17-208ENST00000493711 DCAF12Q5T6F0 453 aa11.84□□□□□ -0.51
SNX17-208ENST00000493711 TMEM214Q6NUQ4 689 aaKnown RBP11.84□□□□□ -0.51
SNX17-208ENST00000493711 TRIM40Q6P9F5 258 aa11.84□□□□□ -0.51
SNX17-208ENST00000493711 VN1R5Q7Z5H4 357 aa11.84□□□□□ -0.51
SNX17-208ENST00000493711 BMPERQ8N8U9 685 aa11.84□□□□□ -0.51
SNX17-208ENST00000493711 OR1L3Q8NH93 324 aa11.84□□□□□ -0.51
SNX17-208ENST00000493711 MTFMTQ96DP5 389 aaKnown RBP11.84□□□□□ -0.51
SNX17-208ENST00000493711 KCNC2Q96PR1 638 aa11.84□□□□□ -0.51
SNX17-208ENST00000493711 REXO4Q9GZR2 422 aaKnown RBP11.84□□□□□ -0.51
SNX17-208ENST00000493711 MEAF6Q9HAF1 191 aa11.84□□□□□ -0.51
SNX17-208ENST00000493711 FGFR1OP2Q9NVK5 253 aa11.84□□□□□ -0.51
SNX17-208ENST00000493711 ADAM29Q9UKF5 820 aa11.84□□□□□ -0.51
SNX17-208ENST00000493711 TMED5Q9Y3A6 229 aa11.84□□□□□ -0.51
SNX17-208ENST00000493711 PCDHGA8Q9Y5G5 932 aa11.84□□□□□ -0.51
SNX17-208ENST00000493711 PCDHGA3Q9Y5H0 932 aa11.84□□□□□ -0.51
SNX17-208ENST00000493711 USH1CQ9Y6N9 552 aa11.84□□□□□ -0.51
SNX17-208ENST00000493711 ASCC3Q8N3C0 2202 aaKnown RBP11.83□□□□□ -0.52
SNX17-208ENST00000493711 HYKKA2RU49 373 aa11.83□□□□□ -0.52
SNX17-208ENST00000493711 SHOX2O60902 331 aaPredicted RBP11.83□□□□□ -0.52
SNX17-208ENST00000493711 SKAP2O75563 359 aaPredicted RBP11.83□□□□□ -0.52
SNX17-208ENST00000493711 MYO1DO94832 1006 aa11.83□□□□□ -0.52
SNX17-208ENST00000493711 TGFB1P01137 390 aa11.83□□□□□ -0.52
SNX17-208ENST00000493711 LINC00032P0C843 101 aa11.83□□□□□ -0.52
SNX17-208ENST00000493711 KITP10721 976 aa11.83□□□□□ -0.52
SNX17-208ENST00000493711 ALOX12P18054 663 aa11.83□□□□□ -0.52
SNX17-208ENST00000493711 MAPK1P28482 360 aa11.83□□□□□ -0.52
SNX17-208ENST00000493711 GSTM5P46439 218 aa11.83□□□□□ -0.52
SNX17-208ENST00000493711 AVPR1BP47901 424 aa11.83□□□□□ -0.52
SNX17-208ENST00000493711 HTR6P50406 440 aa11.83□□□□□ -0.52
SNX17-208ENST00000493711 IRX1P78414 480 aaPredicted RBP11.83□□□□□ -0.52
SNX17-208ENST00000493711 BTKQ06187 659 aa11.83□□□□□ -0.52
SNX17-208ENST00000493711 ACSM2AQ08AH3 577 aa11.83□□□□□ -0.52
SNX17-208ENST00000493711 PDCD2Q16342 344 aaPredicted RBP11.83□□□□□ -0.52
SNX17-208ENST00000493711 AP5B1Q2VPB7 878 aa11.83□□□□□ -0.52
SNX17-208ENST00000493711 TOR1AIP1Q5JTV8 583 aa11.83□□□□□ -0.52
SNX17-208ENST00000493711 SPDYAQ5MJ70 313 aa11.83□□□□□ -0.52
SNX17-208ENST00000493711 ACSM2BQ68CK6 577 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms