RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 CYP4F8P98187 520 aa11.27□□□□□ -0.61
HDAC4-210ENST00000493582 DSC3Q14574 896 aa11.27□□□□□ -0.61
HDAC4-210ENST00000493582 ZRANB3Q5FWF4 1079 aa11.27□□□□□ -0.61
HDAC4-210ENST00000493582 TRIQKQ629K1 86 aa11.27□□□□□ -0.61
HDAC4-210ENST00000493582 C22orf42Q6IC83 251 aa11.27□□□□□ -0.61
HDAC4-210ENST00000493582 BRAT1Q6PJG6 821 aa11.27□□□□□ -0.61
HDAC4-210ENST00000493582 LGI4Q8N135 537 aa11.27□□□□□ -0.61
HDAC4-210ENST00000493582 UMODL1-AS1Q8N2C9 162 aa11.27□□□□□ -0.61
HDAC4-210ENST00000493582 GJD4Q96KN9 370 aaPredicted RBP11.27□□□□□ -0.61
HDAC4-210ENST00000493582 B3GALT6Q96L58 329 aa11.27□□□□□ -0.61
HDAC4-210ENST00000493582 NDUFAF4Q9P032 175 aa11.27□□□□□ -0.61
HDAC4-210ENST00000493582 COMMD3Q9UBI1 195 aa11.27□□□□□ -0.61
HDAC4-210ENST00000493582 MGAT4AQ9UM21 535 aa11.27□□□□□ -0.61
HDAC4-210ENST00000493582 VPS9D1Q9Y2B5 631 aa11.27□□□□□ -0.61
HDAC4-210ENST00000493582 MANBAO00462 879 aa11.26□□□□□ -0.61
HDAC4-210ENST00000493582 FPGTO14772 594 aa11.26□□□□□ -0.61
HDAC4-210ENST00000493582 SUV39H1O43463 412 aa11.26□□□□□ -0.61
HDAC4-210ENST00000493582 CSO75390 466 aaKnown RBP11.26□□□□□ -0.61
HDAC4-210ENST00000493582 CCNB2O95067 398 aa11.26□□□□□ -0.61
HDAC4-210ENST00000493582 KCNE1P15382 129 aa11.26□□□□□ -0.61
HDAC4-210ENST00000493582 CPT1AP50416 773 aa11.26□□□□□ -0.61
HDAC4-210ENST00000493582 EXOC3L2Q2M3D2 409 aa11.26□□□□□ -0.61
HDAC4-210ENST00000493582 SPDYE7PQ495Y7 208 aa11.26□□□□□ -0.61
HDAC4-210ENST00000493582 TMIGD1Q6UXZ0 262 aa11.26□□□□□ -0.61
HDAC4-210ENST00000493582 GLT6D1Q7Z4J2 308 aa11.26□□□□□ -0.61
HDAC4-210ENST00000493582 TRIM46Q7Z4K8 759 aa11.26□□□□□ -0.61
HDAC4-210ENST00000493582 BBS7Q8IWZ6 715 aa11.26□□□□□ -0.61
HDAC4-210ENST00000493582 PGBD3Q8N328 593 aa11.26□□□□□ -0.61
HDAC4-210ENST00000493582 ZNF431Q8TF32 576 aaPredicted RBP11.26□□□□□ -0.61
HDAC4-210ENST00000493582 TMEM40Q8WWA1 233 aa11.26□□□□□ -0.61
HDAC4-210ENST00000493582 C16orf70Q9BSU1 422 aa11.26□□□□□ -0.61
HDAC4-210ENST00000493582 POLR2J2Q9GZM3 115 aaKnown RBP11.26□□□□□ -0.61
HDAC4-210ENST00000493582 SPNS1Q9H2V7 528 aa11.26□□□□□ -0.61
HDAC4-210ENST00000493582 FKBPLQ9UIM3 349 aa11.26□□□□□ -0.61
HDAC4-210ENST00000493582 SSR3Q9UNL2 185 aa11.26□□□□□ -0.61
HDAC4-210ENST00000493582 MEIS3P2A8K0S8 358 aa11.26□□□□□ -0.61
HDAC4-210ENST00000493582 HBQ1P09105 142 aa11.26□□□□□ -0.61
HDAC4-210ENST00000493582 ACVRL1P37023 503 aa11.26□□□□□ -0.61
HDAC4-210ENST00000493582 ZNF140P52738 457 aaPredicted RBP11.26□□□□□ -0.61
HDAC4-210ENST00000493582 ABATP80404 500 aa11.26□□□□□ -0.61
HDAC4-210ENST00000493582 FGFBP1Q14512 234 aa11.26□□□□□ -0.61
HDAC4-210ENST00000493582 DDI2Q5TDH0 399 aa11.26□□□□□ -0.61
HDAC4-210ENST00000493582 AFTPHQ6ULP2 937 aa11.26□□□□□ -0.61
HDAC4-210ENST00000493582 KIF18BQ86Y91 864 aa11.26□□□□□ -0.61
HDAC4-210ENST00000493582 GPR65Q8IYL9 337 aa11.26□□□□□ -0.61
HDAC4-210ENST00000493582 CLECL1Q8IZS7 167 aa11.26□□□□□ -0.61
HDAC4-210ENST00000493582 C2orf69Q8N8R5 385 aa11.26□□□□□ -0.61
HDAC4-210ENST00000493582 OR6C4Q8NGE1 309 aa11.26□□□□□ -0.61
HDAC4-210ENST00000493582 DNAJB8Q8NHS0 232 aa11.26□□□□□ -0.61
HDAC4-210ENST00000493582 TRAF4Q9BUZ4 470 aaPredicted RBP11.26□□□□□ -0.61
HDAC4-210ENST00000493582 POLR1EQ9GZS1 481 aaKnown RBP11.26□□□□□ -0.61
HDAC4-210ENST00000493582 B3GAT2Q9NPZ5 323 aa11.26□□□□□ -0.61
HDAC4-210ENST00000493582 SEC14L4Q9UDX3 406 aa11.26□□□□□ -0.61
HDAC4-210ENST00000493582 TMCC3Q9ULS5 477 aa11.26□□□□□ -0.61
HDAC4-210ENST00000493582 STUB1Q9UNE7 303 aa11.26□□□□□ -0.61
HDAC4-210ENST00000493582 TMEM229AB2RXF0 380 aa11.26□□□□□ -0.61
HDAC4-210ENST00000493582 J3KTA2 159 aa11.26□□□□□ -0.61
HDAC4-210ENST00000493582 PTGESO14684 152 aa11.26□□□□□ -0.61
HDAC4-210ENST00000493582 LYRM1O43325 122 aa11.26□□□□□ -0.61
HDAC4-210ENST00000493582 TRIM3O75382 744 aaPredicted RBP11.26□□□□□ -0.61
HDAC4-210ENST00000493582 PSIP1O75475 530 aaKnown RBP11.26□□□□□ -0.61
HDAC4-210ENST00000493582 ACPPP15309 386 aa11.26□□□□□ -0.61
HDAC4-210ENST00000493582 MC4RP32245 332 aa11.26□□□□□ -0.61
HDAC4-210ENST00000493582 SDC2P34741 201 aa11.26□□□□□ -0.61
HDAC4-210ENST00000493582 CNR2P34972 360 aa11.26□□□□□ -0.61
HDAC4-210ENST00000493582 PXNP49023 591 aaPredicted RBP11.26□□□□□ -0.61
HDAC4-210ENST00000493582 SPIBQ01892 262 aa11.26□□□□□ -0.61
HDAC4-210ENST00000493582 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.26□□□□□ -0.61
HDAC4-210ENST00000493582 BTN1A1Q13410 526 aa11.26□□□□□ -0.61
HDAC4-210ENST00000493582 AANATQ16613 207 aa11.26□□□□□ -0.61
HDAC4-210ENST00000493582 DGKKQ5KSL6 1271 aa11.26□□□□□ -0.61
HDAC4-210ENST00000493582 TYW3Q6IPR3 259 aaKnown RBP11.26□□□□□ -0.61
HDAC4-210ENST00000493582 ARSKQ6UWY0 536 aa11.26□□□□□ -0.61
HDAC4-210ENST00000493582 TEX26Q8N6G2 289 aa11.26□□□□□ -0.61
HDAC4-210ENST00000493582 ZBTB44Q8NCP5 570 aa11.26□□□□□ -0.61
HDAC4-210ENST00000493582 DUSP18Q8NEJ0 188 aa11.26□□□□□ -0.61
HDAC4-210ENST00000493582 AKAP1Q92667 903 aaKnown RBP eCLIP11.26□□□□□ -0.61
HDAC4-210ENST00000493582 EXOC2Q96KP1 924 aa11.26□□□□□ -0.61
HDAC4-210ENST00000493582 FAM129BQ96TA1 746 aa11.26□□□□□ -0.61
HDAC4-210ENST00000493582 RTP3Q9BQQ7 232 aa11.26□□□□□ -0.61
HDAC4-210ENST00000493582 MCOLN1Q9GZU1 580 aa11.26□□□□□ -0.61
HDAC4-210ENST00000493582 RACGAP1Q9H0H5 632 aa11.26□□□□□ -0.61
HDAC4-210ENST00000493582 ERVMER34-1Q9H9K5 563 aa11.26□□□□□ -0.61
HDAC4-210ENST00000493582 ZC4H2Q9NQZ6 224 aa11.26□□□□□ -0.61
HDAC4-210ENST00000493582 TXNL4BQ9NX01 149 aaKnown RBP11.26□□□□□ -0.61
HDAC4-210ENST00000493582 STOML2Q9UJZ1 356 aa11.26□□□□□ -0.61
HDAC4-210ENST00000493582 TLR6Q9Y2C9 796 aa11.26□□□□□ -0.61
HDAC4-210ENST00000493582 POFUT2Q9Y2G5 429 aa11.26□□□□□ -0.61
HDAC4-210ENST00000493582 AUP1Q9Y679 476 aa11.26□□□□□ -0.61
HDAC4-210ENST00000493582 HYKKA2RU49 373 aa11.25□□□□□ -0.61
HDAC4-210ENST00000493582 ENTPD6O75354 484 aa11.25□□□□□ -0.61
HDAC4-210ENST00000493582 GPR32O75388 356 aa11.25□□□□□ -0.61
HDAC4-210ENST00000493582 ALDH1A1P00352 501 aa11.25□□□□□ -0.61
HDAC4-210ENST00000493582 PDYNP01213 254 aa11.25□□□□□ -0.61
HDAC4-210ENST00000493582 FAM157BP0CG42 384 aa11.25□□□□□ -0.61
HDAC4-210ENST00000493582 GPX2P18283 190 aa11.25□□□□□ -0.61
HDAC4-210ENST00000493582 SDC1P18827 310 aa11.25□□□□□ -0.61
HDAC4-210ENST00000493582 FEN1P39748 380 aaKnown RBP11.25□□□□□ -0.61
HDAC4-210ENST00000493582 CCT3P49368 545 aaKnown RBP11.25□□□□□ -0.61
HDAC4-210ENST00000493582 CDC42P60953 191 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms