RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 EMP3P54852 163 aa11.01□□□□□ -0.65
CTSA-209ENST00000493522 DCDP81605 110 aaKnown RBP11.01□□□□□ -0.65
CTSA-209ENST00000493522 MC1RQ01726 317 aa11.01□□□□□ -0.65
CTSA-209ENST00000493522 CDC20Q12834 499 aa11.01□□□□□ -0.65
CTSA-209ENST00000493522 DDX39BQ13838 428 aaKnown RBP11.01□□□□□ -0.65
CTSA-209ENST00000493522 NCF4Q15080 339 aa11.01□□□□□ -0.65
CTSA-209ENST00000493522 TBCCQ15814 346 aa11.01□□□□□ -0.65
CTSA-209ENST00000493522 NKAIN1Q4KMZ8 207 aa11.01□□□□□ -0.65
CTSA-209ENST00000493522 TOR1AIP1Q5JTV8 583 aa11.01□□□□□ -0.65
CTSA-209ENST00000493522 GARNL3Q5VVW2 1013 aa11.01□□□□□ -0.65
CTSA-209ENST00000493522 ADNP2Q6IQ32 1131 aa11.01□□□□□ -0.65
CTSA-209ENST00000493522 GRHL2Q6ISB3 625 aa11.01□□□□□ -0.65
CTSA-209ENST00000493522 LCN10Q6JVE6 187 aa11.01□□□□□ -0.65
CTSA-209ENST00000493522 MED27Q6P2C8 311 aa11.01□□□□□ -0.65
CTSA-209ENST00000493522 CCNYL1Q8N7R7 359 aa11.01□□□□□ -0.65
CTSA-209ENST00000493522 ENDOVQ8N8Q3 282 aaKnown RBP11.01□□□□□ -0.65
CTSA-209ENST00000493522 KCT2Q8NC54 265 aa11.01□□□□□ -0.65
CTSA-209ENST00000493522 TRPV3Q8NET8 790 aa11.01□□□□□ -0.65
CTSA-209ENST00000493522 TTLQ8NG68 377 aa11.01□□□□□ -0.65
CTSA-209ENST00000493522 OR52B6Q8NGF0 335 aa11.01□□□□□ -0.65
CTSA-209ENST00000493522 NT5CQ8TCD5 201 aa11.01□□□□□ -0.65
CTSA-209ENST00000493522 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.01□□□□□ -0.65
CTSA-209ENST00000493522 UBE2E3Q969T4 207 aa11.01□□□□□ -0.65
CTSA-209ENST00000493522 TM4SF19Q96DZ7 209 aa11.01□□□□□ -0.65
CTSA-209ENST00000493522 FAM111AQ96PZ2 611 aa11.01□□□□□ -0.65
CTSA-209ENST00000493522 C17orf62Q9BQA9 187 aa11.01□□□□□ -0.65
CTSA-209ENST00000493522 C1QTNF3Q9BXJ4 246 aa11.01□□□□□ -0.65
CTSA-209ENST00000493522 PITHD1Q9GZP4 211 aaPredicted RBP11.01□□□□□ -0.65
CTSA-209ENST00000493522 DRC3Q9H069 523 aa11.01□□□□□ -0.65
CTSA-209ENST00000493522 STMN4Q9H169 189 aaPredicted RBP11.01□□□□□ -0.65
CTSA-209ENST00000493522 NT5DC2Q9H857 520 aa11.01□□□□□ -0.65
CTSA-209ENST00000493522 ENAMQ9NRM1 1142 aa11.01□□□□□ -0.65
CTSA-209ENST00000493522 IFT80Q9P2H3 777 aaPredicted RBP11.01□□□□□ -0.65
CTSA-209ENST00000493522 SLC17A7Q9P2U7 560 aa11.01□□□□□ -0.65
CTSA-209ENST00000493522 MRPS18BQ9Y676 258 aaKnown RBP11.01□□□□□ -0.65
CTSA-209ENST00000493522 MAU2Q9Y6X3 613 aa11.01□□□□□ -0.65
CTSA-209ENST00000493522 USP9YO00507 2555 aaPredicted RBP11.01□□□□□ -0.65
CTSA-209ENST00000493522 A0A0A6YYC8 382 aaPredicted RBP11□□□□□ -0.65
CTSA-209ENST00000493522 ANKDD1BA6NHY2 528 aa11□□□□□ -0.65
CTSA-209ENST00000493522 C21orf140B9A014 251 aa11□□□□□ -0.65
CTSA-209ENST00000493522 I3L1I5 382 aaPredicted RBP11□□□□□ -0.65
CTSA-209ENST00000493522 OR7A17O14581 309 aa11□□□□□ -0.65
CTSA-209ENST00000493522 NKX2-8O15522 239 aa11□□□□□ -0.65
CTSA-209ENST00000493522 PRPF4O43172 522 aaKnown RBP eCLIP11□□□□□ -0.659e-6■□□□□ 8.2
CTSA-209ENST00000493522 UGDHO60701 494 aa11□□□□□ -0.65
CTSA-209ENST00000493522 WFS1O76024 890 aa11□□□□□ -0.65
CTSA-209ENST00000493522 CLDN9O95484 217 aa11□□□□□ -0.65
CTSA-209ENST00000493522 ZNF888P0CJ79 500 aaPredicted RBP11□□□□□ -0.65
CTSA-209ENST00000493522 PIM1P11309 404 aaPredicted RBP11□□□□□ -0.65
CTSA-209ENST00000493522 CPA3P15088 417 aa11□□□□□ -0.65
CTSA-209ENST00000493522 CREB1P16220 341 aa11□□□□□ -0.65
CTSA-209ENST00000493522 ITGAXP20702 1163 aa11□□□□□ -0.65
CTSA-209ENST00000493522 F8A1P23610 371 aa11□□□□□ -0.65
CTSA-209ENST00000493522 GSTM2P28161 218 aa11□□□□□ -0.65
CTSA-209ENST00000493522 HNF4AP41235 474 aa11□□□□□ -0.65
CTSA-209ENST00000493522 AVPR1BP47901 424 aa11□□□□□ -0.65
CTSA-209ENST00000493522 PRKAA2P54646 552 aa11□□□□□ -0.65
CTSA-209ENST00000493522 CDH13P55290 713 aa11□□□□□ -0.65
CTSA-209ENST00000493522 RPS18P62269 152 aaKnown RBP11□□□□□ -0.65
CTSA-209ENST00000493522 RPS15P62841 145 aaKnown RBP11□□□□□ -0.65
CTSA-209ENST00000493522 CLCQ05315 142 aa11□□□□□ -0.65
CTSA-209ENST00000493522 TRAF3Q13114 568 aa11□□□□□ -0.65
CTSA-209ENST00000493522 PWP1Q13610 501 aa11□□□□□ -0.65
CTSA-209ENST00000493522 PCLAFQ15004 111 aa11□□□□□ -0.65
CTSA-209ENST00000493522 IGFBP7Q16270 282 aa11□□□□□ -0.65
CTSA-209ENST00000493522 UNC50Q53HI1 259 aa11□□□□□ -0.65
CTSA-209ENST00000493522 ZNF678Q5SXM1 525 aa11□□□□□ -0.65
CTSA-209ENST00000493522 MLIPQ5VWP3 458 aa11□□□□□ -0.65
CTSA-209ENST00000493522 TMEM214Q6NUQ4 689 aaKnown RBP11□□□□□ -0.65
CTSA-209ENST00000493522 PRMT9Q6P2P2 845 aa11□□□□□ -0.65
CTSA-209ENST00000493522 ZNF517Q6ZMY9 492 aaPredicted RBP11□□□□□ -0.65
CTSA-209ENST00000493522 TCP10LQ8TDR4 215 aa11□□□□□ -0.65
CTSA-209ENST00000493522 TRPC4APQ8TEL6 797 aa11□□□□□ -0.65
CTSA-209ENST00000493522 APOBEC4Q8WW27 367 aaKnown RBP11□□□□□ -0.65
CTSA-209ENST00000493522 STARD8Q92502 1023 aa11□□□□□ -0.65
CTSA-209ENST00000493522 L3HYPDHQ96EM0 354 aa11□□□□□ -0.65
CTSA-209ENST00000493522 MVB12AQ96EY5 273 aa11□□□□□ -0.65
CTSA-209ENST00000493522 MMABQ96EY8 250 aaPredicted RBP11□□□□□ -0.65
CTSA-209ENST00000493522 PGM2Q96G03 612 aa11□□□□□ -0.65
CTSA-209ENST00000493522 CDK15Q96Q40 435 aa11□□□□□ -0.65
CTSA-209ENST00000493522 ACTL8Q9H568 366 aa11□□□□□ -0.65
CTSA-209ENST00000493522 ANKHQ9HCJ1 492 aa11□□□□□ -0.65
CTSA-209ENST00000493522 ZBTB26Q9HCK0 441 aa11□□□□□ -0.65
CTSA-209ENST00000493522 ZNF304Q9HCX3 659 aa11□□□□□ -0.65
CTSA-209ENST00000493522 ZNF71Q9NQZ8 489 aaPredicted RBP11□□□□□ -0.65
CTSA-209ENST00000493522 COPG2Q9UBF2 871 aa11□□□□□ -0.65
CTSA-209ENST00000493522 KCND3Q9UK17 655 aa11□□□□□ -0.65
CTSA-209ENST00000493522 CDC14AQ9UNH5 594 aa11□□□□□ -0.65
CTSA-209ENST00000493522 PADI2Q9Y2J8 665 aa11□□□□□ -0.65
CTSA-209ENST00000493522 PLLPQ9Y342 182 aa11□□□□□ -0.65
CTSA-209ENST00000493522 RNF11Q9Y3C5 154 aa11□□□□□ -0.65
CTSA-209ENST00000493522 UQCRHLA0A096LP55 91 aa10.99□□□□□ -0.65
CTSA-209ENST00000493522 URADA6NGE7 173 aa10.99□□□□□ -0.65
CTSA-209ENST00000493522 ZNF860A6NHJ4 632 aa10.99□□□□□ -0.65
CTSA-209ENST00000493522 FFAR3O14843 346 aa10.99□□□□□ -0.65
CTSA-209ENST00000493522 GPR42O15529 346 aa10.99□□□□□ -0.65
CTSA-209ENST00000493522 CLEC3AO75596 197 aa10.99□□□□□ -0.65
CTSA-209ENST00000493522 KLHL18O94889 574 aa10.99□□□□□ -0.65
CTSA-209ENST00000493522 OTCP00480 354 aa10.99□□□□□ -0.65
CTSA-209ENST00000493522 UQCRHP07919 91 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms