RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 TIAF1O95411 115 aa16.37■□□□□ 0.21
LIME1-208ENST00000493265 FGF4P08620 206 aa16.37■□□□□ 0.21
LIME1-208ENST00000493265 ITPKBP27987 946 aa16.37■□□□□ 0.21
LIME1-208ENST00000493265 HNRNPH1P31943 449 aaKnown RBP16.37■□□□□ 0.21
LIME1-208ENST00000493265 PIK3CBP42338 1070 aa16.37■□□□□ 0.21
LIME1-208ENST00000493265 GABREP78334 506 aa16.37■□□□□ 0.21
LIME1-208ENST00000493265 BTKQ06187 659 aa16.37■□□□□ 0.21
LIME1-208ENST00000493265 PWP1Q13610 501 aa16.37■□□□□ 0.21
LIME1-208ENST00000493265 IL11RAQ14626 422 aa16.37■□□□□ 0.21
LIME1-208ENST00000493265 GRM7Q14831 915 aa16.37■□□□□ 0.21
LIME1-208ENST00000493265 IMPG1Q17R60 797 aa16.37■□□□□ 0.21
LIME1-208ENST00000493265 DCAF12Q5T6F0 453 aa16.37■□□□□ 0.21
LIME1-208ENST00000493265 PWWP2BQ6NUJ5 590 aa16.37■□□□□ 0.21
LIME1-208ENST00000493265 CYB5D1Q6P9G0 228 aa16.37■□□□□ 0.21
LIME1-208ENST00000493265 CACTIN-AS1Q8N1I8 211 aa16.37■□□□□ 0.21
LIME1-208ENST00000493265 NT5CQ8TCD5 201 aa16.37■□□□□ 0.21
LIME1-208ENST00000493265 USP7Q93009 1102 aa16.37■□□□□ 0.21
LIME1-208ENST00000493265 TM4SF19Q96DZ7 209 aa16.37■□□□□ 0.21
LIME1-208ENST00000493265 THOC1Q96FV9 657 aaKnown RBP16.37■□□□□ 0.21
LIME1-208ENST00000493265 CMTM7Q96FZ5 175 aa16.37■□□□□ 0.21
LIME1-208ENST00000493265 FBXO8Q9NRD0 319 aa16.37■□□□□ 0.21
LIME1-208ENST00000493265 ADGRE2Q9UHX3 823 aa16.37■□□□□ 0.21
LIME1-208ENST00000493265 SLC12A4Q9UP95 1085 aa16.37■□□□□ 0.21
LIME1-208ENST00000493265 MRPS2Q9Y399 296 aaKnown RBP16.37■□□□□ 0.21
LIME1-208ENST00000493265 DNAJC15Q9Y5T4 150 aa16.37■□□□□ 0.21
LIME1-208ENST00000493265 MDC1Q14676 2089 aaKnown RBP16.37■□□□□ 0.21
LIME1-208ENST00000493265 KIF26BQ2KJY2 2108 aa16.37■□□□□ 0.21
LIME1-208ENST00000493265 HYKKA2RU49 373 aa16.36■□□□□ 0.21
LIME1-208ENST00000493265 TXNDC9O14530 226 aa16.36■□□□□ 0.21
LIME1-208ENST00000493265 PIP5K1BO14986 540 aa16.36■□□□□ 0.21
LIME1-208ENST00000493265 ETHE1O95571 254 aa16.36■□□□□ 0.21
LIME1-208ENST00000493265 B3GALT4O96024 378 aa16.36■□□□□ 0.21
LIME1-208ENST00000493265 PRB1P04280 392 aa16.36■□□□□ 0.21
LIME1-208ENST00000493265 NTRK1P04629 796 aa16.36■□□□□ 0.21
LIME1-208ENST00000493265 SERPINA6P08185 405 aa16.36■□□□□ 0.21
LIME1-208ENST00000493265 MSL3P1P0C860 447 aa16.36■□□□□ 0.21
LIME1-208ENST00000493265 ZNF888P0CJ79 500 aaPredicted RBP16.36■□□□□ 0.21
LIME1-208ENST00000493265 FGF5P12034 268 aa16.36■□□□□ 0.21
LIME1-208ENST00000493265 ALAS2P22557 587 aa16.36■□□□□ 0.21
LIME1-208ENST00000493265 GSTM2P28161 218 aa16.36■□□□□ 0.21
LIME1-208ENST00000493265 SERPINB1P30740 379 aa16.36■□□□□ 0.21
LIME1-208ENST00000493265 RAP1GDS1P52306 607 aa16.36■□□□□ 0.21
LIME1-208ENST00000493265 PLA2G16P53816 162 aa16.36■□□□□ 0.21
LIME1-208ENST00000493265 RAB8AP61006 207 aa16.36■□□□□ 0.21
LIME1-208ENST00000493265 GNGT1P63211 74 aa16.36■□□□□ 0.21
LIME1-208ENST00000493265 HMGCS1Q01581 520 aa16.36■□□□□ 0.21
LIME1-208ENST00000493265 SF3A3Q12874 501 aaKnown RBP eCLIP16.36■□□□□ 0.21
LIME1-208ENST00000493265 PRTGQ2VWP7 1150 aa16.36■□□□□ 0.21
LIME1-208ENST00000493265 UGT3A2Q3SY77 523 aa16.36■□□□□ 0.21
LIME1-208ENST00000493265 CEACAM20Q6UY09 585 aa16.36■□□□□ 0.21
LIME1-208ENST00000493265 RGS9BPQ6ZS82 235 aa16.36■□□□□ 0.21
LIME1-208ENST00000493265 DTWD1Q8N5C7 304 aa16.36■□□□□ 0.21
LIME1-208ENST00000493265 METTL27Q8N6F8 245 aaPredicted RBP16.36■□□□□ 0.21
LIME1-208ENST00000493265 OR8K5Q8NH50 307 aa16.36■□□□□ 0.21
LIME1-208ENST00000493265 C7orf26Q96N11 449 aa16.36■□□□□ 0.21
LIME1-208ENST00000493265 ZNF285Q96NJ3 590 aa16.36■□□□□ 0.21
LIME1-208ENST00000493265 TAAR9Q96RI9 348 aa16.36■□□□□ 0.21
LIME1-208ENST00000493265 NDC1Q9BTX1 674 aa16.36■□□□□ 0.21
LIME1-208ENST00000493265 MS4A8Q9BY19 250 aa16.36■□□□□ 0.21
LIME1-208ENST00000493265 B3GALT1Q9Y5Z6 326 aa16.36■□□□□ 0.21
LIME1-208ENST00000493265 AK5Q9Y6K8 562 aa16.36■□□□□ 0.21
LIME1-208ENST00000493265 LRIT2A6NDA9 550 aa16.35■□□□□ 0.21
LIME1-208ENST00000493265 FOXE1O00358 373 aaPredicted RBP16.35■□□□□ 0.21
LIME1-208ENST00000493265 ERI3O43414 337 aaKnown RBP16.35■□□□□ 0.21
LIME1-208ENST00000493265 TLX3O43711 291 aaPredicted RBP16.35■□□□□ 0.21
LIME1-208ENST00000493265 MED26O95402 600 aa16.35■□□□□ 0.21
LIME1-208ENST00000493265 TBX6O95947 436 aaPredicted RBP16.35■□□□□ 0.21
LIME1-208ENST00000493265 JUNP05412 331 aaKnown RBP16.35■□□□□ 0.21
LIME1-208ENST00000493265 PTX3P26022 381 aaPredicted RBP16.35■□□□□ 0.21
LIME1-208ENST00000493265 RAB15P59190 212 aa16.35■□□□□ 0.21
LIME1-208ENST00000493265 STXBP1P61764 594 aaKnown RBP16.35■□□□□ 0.21
LIME1-208ENST00000493265 SNRPNP63162 240 aaKnown RBP16.35■□□□□ 0.21
LIME1-208ENST00000493265 HYAL2Q12891 473 aa16.35■□□□□ 0.21
LIME1-208ENST00000493265 SPDYAQ5MJ70 313 aa16.35■□□□□ 0.21
LIME1-208ENST00000493265 C1orf189Q5VU69 101 aa16.35■□□□□ 0.21
LIME1-208ENST00000493265 KHDRBS2Q5VWX1 349 aaKnown RBP16.35■□□□□ 0.21
LIME1-208ENST00000493265 TLDC1Q6P9B6 456 aa16.35■□□□□ 0.21
LIME1-208ENST00000493265 TTLL10Q6ZVT0 673 aa16.35■□□□□ 0.21
LIME1-208ENST00000493265 CHSY3Q70JA7 882 aa16.35■□□□□ 0.21
LIME1-208ENST00000493265 LRRC34Q8IZ02 419 aa16.35■□□□□ 0.21
LIME1-208ENST00000493265 CLIP3Q96DZ5 547 aa16.35■□□□□ 0.21
LIME1-208ENST00000493265 SERPINI1Q99574 410 aa16.35■□□□□ 0.21
LIME1-208ENST00000493265 C17orf62Q9BQA9 187 aa16.35■□□□□ 0.21
LIME1-208ENST00000493265 SORBS1Q9BX66 1292 aaKnown RBP16.35■□□□□ 0.21
LIME1-208ENST00000493265 NUF2Q9BZD4 464 aa16.35■□□□□ 0.21
LIME1-208ENST00000493265 ACPTQ9BZG2 426 aa16.35■□□□□ 0.21
LIME1-208ENST00000493265 SLC6A16Q9GZN6 736 aa16.35■□□□□ 0.21
LIME1-208ENST00000493265 REXO4Q9GZR2 422 aaKnown RBP16.35■□□□□ 0.21
LIME1-208ENST00000493265 AICDAQ9GZX7 198 aa16.35■□□□□ 0.21
LIME1-208ENST00000493265 TUBB1Q9H4B7 451 aa16.35■□□□□ 0.21
LIME1-208ENST00000493265 ACTR5Q9H9F9 607 aaPredicted RBP16.35■□□□□ 0.21
LIME1-208ENST00000493265 POLR1BQ9H9Y6 1135 aa16.35■□□□□ 0.21
LIME1-208ENST00000493265 CUTCQ9NTM9 273 aa16.35■□□□□ 0.21
LIME1-208ENST00000493265 TXLNGQ9NUQ3 528 aa16.35■□□□□ 0.21
LIME1-208ENST00000493265 FGFR1OP2Q9NVK5 253 aa16.35■□□□□ 0.21
LIME1-208ENST00000493265 DHCR7Q9UBM7 475 aaKnown RBP16.35■□□□□ 0.21
LIME1-208ENST00000493265 HAO1Q9UJM8 370 aa16.35■□□□□ 0.21
LIME1-208ENST00000493265 ATP6AP2A0A1C7CYW4 349 aa16.34■□□□□ 0.21
LIME1-208ENST00000493265 C4orf51C9J302 202 aa16.34■□□□□ 0.21
LIME1-208ENST00000493265 H3BMH7 237 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms