RNA–Protein interactions for RNA: ENST00000493207.1

RER1-208, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 2

Gene RER1, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-208ENST00000493207 STXBP1P61764 594 aaKnown RBP16■□□□□ 0.15
RER1-208ENST00000493207 LCP2Q13094 533 aa16■□□□□ 0.15
RER1-208ENST00000493207 DDX39BQ13838 428 aaKnown RBP16■□□□□ 0.15
RER1-208ENST00000493207 HERC3Q15034 1050 aa16■□□□□ 0.15
RER1-208ENST00000493207 NCF4Q15080 339 aa16■□□□□ 0.15
RER1-208ENST00000493207 ZRSR2Q15696 482 aaKnown RBP16■□□□□ 0.15
RER1-208ENST00000493207 CFAP157Q5JU67 520 aa16■□□□□ 0.15
RER1-208ENST00000493207 FAM69BQ5VUD6 431 aa16■□□□□ 0.15
RER1-208ENST00000493207 LETMD1Q6P1Q0 360 aa16■□□□□ 0.15
RER1-208ENST00000493207 FRMD7Q6ZUT3 714 aa16■□□□□ 0.15
RER1-208ENST00000493207 ABHD13Q7L211 337 aa16■□□□□ 0.15
RER1-208ENST00000493207 PDSS2Q86YH6 399 aa16■□□□□ 0.15
RER1-208ENST00000493207 RNF175Q8N4F7 328 aa16■□□□□ 0.15
RER1-208ENST00000493207 UTP15Q8TED0 518 aaKnown RBP16■□□□□ 0.15
RER1-208ENST00000493207 ZNF473Q8WTR7 871 aaKnown RBP16■□□□□ 0.15
RER1-208ENST00000493207 REPS1Q96D71 796 aa16■□□□□ 0.15
RER1-208ENST00000493207 MTERF1Q99551 399 aaKnown RBP16■□□□□ 0.15
RER1-208ENST00000493207 C17orf62Q9BQA9 187 aa16■□□□□ 0.15
RER1-208ENST00000493207 GPR87Q9BY21 358 aa16■□□□□ 0.15
RER1-208ENST00000493207 ACTL8Q9H568 366 aa16■□□□□ 0.15
RER1-208ENST00000493207 ZNF225Q9UK10 706 aa16■□□□□ 0.15
RER1-208ENST00000493207 FARSAQ9Y285 508 aaKnown RBP16■□□□□ 0.15
RER1-208ENST00000493207 NAALAD2Q9Y3Q0 740 aa16■□□□□ 0.15
RER1-208ENST00000493207 PCDHGA6Q9Y5G7 932 aa16■□□□□ 0.15
RER1-208ENST00000493207 SLC22A7Q9Y694 548 aa16■□□□□ 0.15
RER1-208ENST00000493207 ANKRD11Q6UB99 2663 aaPredicted RBP16■□□□□ 0.15
RER1-208ENST00000493207 LRIT2A6NDA9 550 aa15.99■□□□□ 0.15
RER1-208ENST00000493207 C4orf51C9J302 202 aa15.99■□□□□ 0.15
RER1-208ENST00000493207 SGK494L7N484 410 aa15.99■□□□□ 0.15
RER1-208ENST00000493207 FFAR3O14843 346 aa15.99■□□□□ 0.15
RER1-208ENST00000493207 GPR42O15529 346 aa15.99■□□□□ 0.15
RER1-208ENST00000493207 PRPF4O43172 522 aaKnown RBP eCLIP15.99■□□□□ 0.151e-6■■■□□ 18.8
RER1-208ENST00000493207 TRIM13O60858 407 aa15.99■□□□□ 0.15
RER1-208ENST00000493207 SH3BGRLO75368 114 aa15.99■□□□□ 0.15
RER1-208ENST00000493207 KLHL18O94889 574 aa15.99■□□□□ 0.15
RER1-208ENST00000493207 OR4F21O95013 312 aa15.99■□□□□ 0.15
RER1-208ENST00000493207 NSA2O95478 260 aaKnown RBP15.99■□□□□ 0.15
RER1-208ENST00000493207 TBX6O95947 436 aaPredicted RBP15.99■□□□□ 0.15
RER1-208ENST00000493207 ONECUT2O95948 504 aa15.99■□□□□ 0.15
RER1-208ENST00000493207 ALOX12P18054 663 aa15.99■□□□□ 0.15
RER1-208ENST00000493207 SERPINB1P30740 379 aa15.99■□□□□ 0.15
RER1-208ENST00000493207 ETV4P43268 484 aa15.99■□□□□ 0.15
RER1-208ENST00000493207 CCR10P46092 362 aa15.99■□□□□ 0.15
RER1-208ENST00000493207 RAB8AP61006 207 aa15.99■□□□□ 0.15
RER1-208ENST00000493207 MAGOHP61326 146 aaKnown RBP15.99■□□□□ 0.15
RER1-208ENST00000493207 DSG2Q14126 1118 aa15.99■□□□□ 0.15
RER1-208ENST00000493207 GGTA1PQ4G0N0 100 aa15.99■□□□□ 0.15
RER1-208ENST00000493207 DEFB134Q4QY38 66 aa15.99■□□□□ 0.15
RER1-208ENST00000493207 FAM219BQ5XKK7 198 aa15.99■□□□□ 0.15
RER1-208ENST00000493207 TTC19Q6DKK2 380 aaPredicted RBP15.99■□□□□ 0.15
RER1-208ENST00000493207 MRPL14Q6P1L8 145 aaKnown RBP15.99■□□□□ 0.15
RER1-208ENST00000493207 OVCH1Q7RTY7 1134 aa15.99■□□□□ 0.15
RER1-208ENST00000493207 SYVN1Q86TM6 617 aa15.99■□□□□ 0.15
RER1-208ENST00000493207 AFAP1L2Q8N4X5 818 aa15.99■□□□□ 0.15
RER1-208ENST00000493207 AMER3Q8N944 861 aa15.99■□□□□ 0.15
RER1-208ENST00000493207 ZSCAN1Q8NBB4 408 aa15.99■□□□□ 0.15
RER1-208ENST00000493207 HUS1BQ8NHY5 278 aa15.99■□□□□ 0.15
RER1-208ENST00000493207 STARD8Q92502 1023 aa15.99■□□□□ 0.15
RER1-208ENST00000493207 FKBP10Q96AY3 582 aa15.99■□□□□ 0.15
RER1-208ENST00000493207 TLCD1Q96CP7 247 aa15.99■□□□□ 0.15
RER1-208ENST00000493207 MTFMTQ96DP5 389 aaKnown RBP15.99■□□□□ 0.15
RER1-208ENST00000493207 MS4A6EQ96DS6 147 aa15.99■□□□□ 0.15
RER1-208ENST00000493207 SLC45A3Q96JT2 553 aa15.99■□□□□ 0.15
RER1-208ENST00000493207 ZNF382Q96SR6 550 aa15.99■□□□□ 0.15
RER1-208ENST00000493207 YIPF2Q9BWQ6 316 aa15.99■□□□□ 0.15
RER1-208ENST00000493207 REXO4Q9GZR2 422 aaKnown RBP15.99■□□□□ 0.15
RER1-208ENST00000493207 VIPAS39Q9H9C1 493 aa15.99■□□□□ 0.15
RER1-208ENST00000493207 CTSFQ9UBX1 484 aa15.99■□□□□ 0.15
RER1-208ENST00000493207 ADGRE2Q9UHX3 823 aa15.99■□□□□ 0.15
RER1-208ENST00000493207 STK38LQ9Y2H1 464 aa15.99■□□□□ 0.15
RER1-208ENST00000493207 TPRP12270 2363 aaKnown RBP15.99■□□□□ 0.15
RER1-208ENST00000493207 ZNF860A6NHJ4 632 aa15.98■□□□□ 0.15
RER1-208ENST00000493207 SEC16AO15027 2179 aa15.98■□□□□ 0.15
RER1-208ENST00000493207 TM9SF1O15321 606 aa15.98■□□□□ 0.15
RER1-208ENST00000493207 ERI3O43414 337 aaKnown RBP15.98■□□□□ 0.15
RER1-208ENST00000493207 GALR3O60755 368 aaPredicted RBP15.98■□□□□ 0.15
RER1-208ENST00000493207 CNOT3O75175 753 aaKnown RBP15.98■□□□□ 0.15
RER1-208ENST00000493207 RDH16O75452 317 aa15.98■□□□□ 0.15
RER1-208ENST00000493207 ZWINTO95229 277 aa15.98■□□□□ 0.15
RER1-208ENST00000493207 TGFB1P01137 390 aa15.98■□□□□ 0.15
RER1-208ENST00000493207 PIK3CBP42338 1070 aa15.98■□□□□ 0.15
RER1-208ENST00000493207 NEK2P51955 445 aa15.98■□□□□ 0.15
RER1-208ENST00000493207 FOXL2P58012 376 aa15.98■□□□□ 0.15
RER1-208ENST00000493207 NAA20P61599 178 aa15.98■□□□□ 0.15
RER1-208ENST00000493207 CXADRP78310 365 aa15.98■□□□□ 0.15
RER1-208ENST00000493207 PHEXP78562 749 aa15.98■□□□□ 0.15
RER1-208ENST00000493207 MAT1AQ00266 395 aaKnown RBP15.98■□□□□ 0.15
RER1-208ENST00000493207 ASPHQ12797 758 aa15.98■□□□□ 0.15
RER1-208ENST00000493207 SYT16Q17RD7 645 aa15.98■□□□□ 0.15
RER1-208ENST00000493207 C19orf48Q6RUI8 117 aa15.98■□□□□ 0.15
RER1-208ENST00000493207 GPRIN3Q6ZVF9 776 aa15.98■□□□□ 0.15
RER1-208ENST00000493207 CDYL2Q8N8U2 506 aa15.98■□□□□ 0.15
RER1-208ENST00000493207 WDR20Q8TBZ3 569 aa15.98■□□□□ 0.15
RER1-208ENST00000493207 GAL3ST3Q96A11 431 aa15.98■□□□□ 0.15
RER1-208ENST00000493207 ARL8AQ96BM9 186 aa15.98■□□□□ 0.15
RER1-208ENST00000493207 CRELD1Q96HD1 420 aa15.98■□□□□ 0.15
RER1-208ENST00000493207 MAGEB10Q96LZ2 347 aaPredicted RBP15.98■□□□□ 0.15
RER1-208ENST00000493207 F2RL3Q96RI0 385 aa15.98■□□□□ 0.15
RER1-208ENST00000493207 GATA5Q9BWX5 397 aaPredicted RBP15.98■□□□□ 0.15
RER1-208ENST00000493207 MS4A8Q9BY19 250 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms