RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 COPG2Q9UBF2 871 aa11.72□□□□□ -0.53
COL6A1-205ENST00000492851 ENTPD4Q9Y227 616 aa11.72□□□□□ -0.53
COL6A1-205ENST00000492851 SLC22A14Q9Y267 594 aa11.72□□□□□ -0.53
COL6A1-205ENST00000492851 OARD1Q9Y530 152 aa11.72□□□□□ -0.53
COL6A1-205ENST00000492851 SPTAN1Q13813 2472 aaKnown RBP11.71□□□□□ -0.53
COL6A1-205ENST00000492851 A0A088AWK7 358 aa11.71□□□□□ -0.53
COL6A1-205ENST00000492851 TRGV8A0A0C4DH27 118 aa11.71□□□□□ -0.53
COL6A1-205ENST00000492851 ENO4A6NNW6 628 aa11.71□□□□□ -0.53
COL6A1-205ENST00000492851 CDC123O75794 336 aaPredicted RBP11.71□□□□□ -0.53
COL6A1-205ENST00000492851 SEC31AO94979 1220 aaKnown RBP11.71□□□□□ -0.53
COL6A1-205ENST00000492851 RNH1P13489 461 aaKnown RBP11.71□□□□□ -0.53
COL6A1-205ENST00000492851 ZNF10P21506 573 aaPredicted RBP11.71□□□□□ -0.53
COL6A1-205ENST00000492851 SAT1P21673 171 aa11.71□□□□□ -0.53
COL6A1-205ENST00000492851 COL8A1P27658 744 aa11.71□□□□□ -0.53
COL6A1-205ENST00000492851 CD96P40200 585 aa11.71□□□□□ -0.53
COL6A1-205ENST00000492851 KCNK10P57789 538 aa11.71□□□□□ -0.53
COL6A1-205ENST00000492851 SLC26A5P58743 744 aa11.71□□□□□ -0.53
COL6A1-205ENST00000492851 PDIA2Q13087 525 aaKnown RBP11.71□□□□□ -0.53
COL6A1-205ENST00000492851 TUBA3CQ13748 450 aa11.71□□□□□ -0.53
COL6A1-205ENST00000492851 RBBP5Q15291 538 aaKnown RBP11.71□□□□□ -0.53
COL6A1-205ENST00000492851 OR1C1Q15619 314 aa11.71□□□□□ -0.53
COL6A1-205ENST00000492851 PPP1R3AQ16821 1122 aa11.71□□□□□ -0.53
COL6A1-205ENST00000492851 ZXDCQ2QGD7 858 aaPredicted RBP11.71□□□□□ -0.53
COL6A1-205ENST00000492851 CDKL4Q5MAI5 379 aa11.71□□□□□ -0.53
COL6A1-205ENST00000492851 C1QL3Q5VWW1 255 aa11.71□□□□□ -0.53
COL6A1-205ENST00000492851 SP5Q6BEB4 398 aaPredicted RBP11.71□□□□□ -0.53
COL6A1-205ENST00000492851 TUBA3EQ6PEY2 450 aa11.71□□□□□ -0.53
COL6A1-205ENST00000492851 RPTNQ6XPR3 784 aa11.71□□□□□ -0.53
COL6A1-205ENST00000492851 FRA10AC1Q70Z53 315 aa11.71□□□□□ -0.53
COL6A1-205ENST00000492851 ZC3HC1Q86WB0 502 aaKnown RBP11.71□□□□□ -0.53
COL6A1-205ENST00000492851 RPS19BP1Q86WX3 136 aaKnown RBP11.71□□□□□ -0.53
COL6A1-205ENST00000492851 CRLF3Q8IUI8 442 aa11.71□□□□□ -0.53
COL6A1-205ENST00000492851 LURAP1LQ8IV03 231 aa11.71□□□□□ -0.53
COL6A1-205ENST00000492851 SPNS2Q8IVW8 549 aa11.71□□□□□ -0.53
COL6A1-205ENST00000492851 C7orf57Q8NEG2 295 aa11.71□□□□□ -0.53
COL6A1-205ENST00000492851 ELP5Q8TE02 316 aa11.71□□□□□ -0.53
COL6A1-205ENST00000492851 UTP15Q8TED0 518 aaKnown RBP11.71□□□□□ -0.53
COL6A1-205ENST00000492851 TSPAN17Q96FV3 270 aa11.71□□□□□ -0.53
COL6A1-205ENST00000492851 FAR2Q96K12 515 aa11.71□□□□□ -0.53
COL6A1-205ENST00000492851 PTCHD1Q96NR3 888 aa11.71□□□□□ -0.53
COL6A1-205ENST00000492851 NAPGQ99747 312 aaPredicted RBP11.71□□□□□ -0.53
COL6A1-205ENST00000492851 NPLQ9BXD5 320 aaPredicted RBP11.71□□□□□ -0.53
COL6A1-205ENST00000492851 SLC6A16Q9GZN6 736 aa11.71□□□□□ -0.53
COL6A1-205ENST00000492851 CNOT10Q9H9A5 744 aaKnown RBP11.71□□□□□ -0.53
COL6A1-205ENST00000492851 GPAMQ9HCL2 828 aa11.71□□□□□ -0.53
COL6A1-205ENST00000492851 PRDM9Q9NQV7 894 aa11.71□□□□□ -0.53
COL6A1-205ENST00000492851 TXNDC16Q9P2K2 825 aa11.71□□□□□ -0.53
COL6A1-205ENST00000492851 CTNNAL1Q9UBT7 734 aa11.71□□□□□ -0.53
COL6A1-205ENST00000492851 KLF2Q9Y5W3 355 aaPredicted RBP11.71□□□□□ -0.53
COL6A1-205ENST00000492851 DOPEY1Q5JWR5 2465 aa11.71□□□□□ -0.53
COL6A1-205ENST00000492851 TEX15Q9BXT5 2789 aa11.7□□□□□ -0.54
COL6A1-205ENST00000492851 FAM95CA0A1B0GW59 222 aa11.7□□□□□ -0.54
COL6A1-205ENST00000492851 OR2W5A6NFC9 320 aa11.7□□□□□ -0.54
COL6A1-205ENST00000492851 EFCAB8A8MWE9 144 aa11.7□□□□□ -0.54
COL6A1-205ENST00000492851 E7ESA3 106 aa11.7□□□□□ -0.54
COL6A1-205ENST00000492851 CCL21O00585 134 aa11.7□□□□□ -0.54
COL6A1-205ENST00000492851 ZG16O60844 167 aa11.7□□□□□ -0.54
COL6A1-205ENST00000492851 B4GALT2O60909 372 aa11.7□□□□□ -0.54
COL6A1-205ENST00000492851 ZNF888P0CJ79 500 aaPredicted RBP11.7□□□□□ -0.54
COL6A1-205ENST00000492851 SMIM10L1P0DMW3 83 aa11.7□□□□□ -0.54
COL6A1-205ENST00000492851 C1GALT1C1LP0DN25 315 aa11.7□□□□□ -0.54
COL6A1-205ENST00000492851 CA7P43166 264 aa11.7□□□□□ -0.54
COL6A1-205ENST00000492851 SNRPNP63162 240 aaKnown RBP11.7□□□□□ -0.54
COL6A1-205ENST00000492851 REEP5Q00765 189 aa11.7□□□□□ -0.54
COL6A1-205ENST00000492851 POU4F1Q01851 419 aa11.7□□□□□ -0.54
COL6A1-205ENST00000492851 ALDH6A1Q02252 535 aaKnown RBP11.7□□□□□ -0.54
COL6A1-205ENST00000492851 OC90Q02509 493 aaPredicted RBP11.7□□□□□ -0.54
COL6A1-205ENST00000492851 RCN2Q14257 317 aa11.7□□□□□ -0.54
COL6A1-205ENST00000492851 NAA30Q147X3 362 aaPredicted RBP11.7□□□□□ -0.54
COL6A1-205ENST00000492851 SLC25A25Q6KCM7 469 aa11.7□□□□□ -0.54
COL6A1-205ENST00000492851 CYS1Q717R9 158 aa11.7□□□□□ -0.54
COL6A1-205ENST00000492851 MAATS1Q7Z4T9 603 aa11.7□□□□□ -0.54
COL6A1-205ENST00000492851 TMPRSS11BQ86T26 416 aa11.7□□□□□ -0.54
COL6A1-205ENST00000492851 TICAM1Q8IUC6 712 aa11.7□□□□□ -0.54
COL6A1-205ENST00000492851 ANKMY2Q8IV38 441 aa11.7□□□□□ -0.54
COL6A1-205ENST00000492851 KRT78Q8N1N4 520 aa11.7□□□□□ -0.54
COL6A1-205ENST00000492851 MDS2Q8NDY4 140 aa11.7□□□□□ -0.54
COL6A1-205ENST00000492851 FBXO36Q8NEA4 188 aa11.7□□□□□ -0.54
COL6A1-205ENST00000492851 OR5T3Q8NGG3 340 aa11.7□□□□□ -0.54
COL6A1-205ENST00000492851 ADAMTS18Q8TE60 1221 aa11.7□□□□□ -0.54
COL6A1-205ENST00000492851 PYROXD1Q8WU10 500 aa11.7□□□□□ -0.54
COL6A1-205ENST00000492851 MOCOSQ96EN8 888 aa11.7□□□□□ -0.54
COL6A1-205ENST00000492851 SCMH1Q96GD3 660 aa11.7□□□□□ -0.54
COL6A1-205ENST00000492851 SMIM10Q96HG1 83 aa11.7□□□□□ -0.54
COL6A1-205ENST00000492851 TSNARE1Q96NA8 513 aa11.7□□□□□ -0.54
COL6A1-205ENST00000492851 RHOJQ9H4E5 214 aa11.7□□□□□ -0.54
COL6A1-205ENST00000492851 NT5DC2Q9H857 520 aa11.7□□□□□ -0.54
COL6A1-205ENST00000492851 PLAC1Q9HBJ0 212 aa11.7□□□□□ -0.54
COL6A1-205ENST00000492851 CHST11Q9NPF2 352 aa11.7□□□□□ -0.54
COL6A1-205ENST00000492851 GPRC5BQ9NZH0 403 aa11.7□□□□□ -0.54
COL6A1-205ENST00000492851 LRFN1Q9P244 771 aa11.7□□□□□ -0.54
COL6A1-205ENST00000492851 MMACHCQ9Y4U1 282 aa11.7□□□□□ -0.54
COL6A1-205ENST00000492851 SPTBN1Q01082 2364 aaKnown RBP11.69□□□□□ -0.54
COL6A1-205ENST00000492851 ASPDHA6ND91 283 aa11.69□□□□□ -0.54
COL6A1-205ENST00000492851 ZNF860A6NHJ4 632 aa11.69□□□□□ -0.54
COL6A1-205ENST00000492851 GABRR3A8MPY1 467 aa11.69□□□□□ -0.54
COL6A1-205ENST00000492851 CDC7O00311 574 aa11.69□□□□□ -0.54
COL6A1-205ENST00000492851 CLDN4O14493 209 aa11.69□□□□□ -0.54
COL6A1-205ENST00000492851 FCHO1O14526 889 aa11.69□□□□□ -0.54
COL6A1-205ENST00000492851 EIF3HO15372 352 aaKnown RBP eCLIP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms