RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 TMEM270Q6UE05 265 aa3.44□□□□□ -1.86
CLK1-213ENST00000492793 SIGLEC15Q6ZMC9 328 aa3.44□□□□□ -1.86
CLK1-213ENST00000492793 C17orf107Q6ZR85 190 aa3.44□□□□□ -1.86
CLK1-213ENST00000492793 NOTCH2NLQ7Z3S9 236 aa3.44□□□□□ -1.86
CLK1-213ENST00000492793 TRMT11Q7Z4G4 463 aaKnown RBP3.44□□□□□ -1.86
CLK1-213ENST00000492793 COX8CQ7Z4L0 72 aa3.44□□□□□ -1.86
CLK1-213ENST00000492793 C5orf24Q7Z6I8 188 aa3.44□□□□□ -1.86
CLK1-213ENST00000492793 CCDC185Q8N715 623 aa3.44□□□□□ -1.86
CLK1-213ENST00000492793 ZNF519Q8TB69 540 aa3.44□□□□□ -1.86
CLK1-213ENST00000492793 OMA1Q96E52 524 aa3.44□□□□□ -1.86
CLK1-213ENST00000492793 CCDC43Q96MW1 224 aaKnown RBP3.44□□□□□ -1.86
CLK1-213ENST00000492793 UBAC1Q9BSL1 405 aa3.44□□□□□ -1.86
CLK1-213ENST00000492793 C5orf66Q9H5L9 145 aa3.44□□□□□ -1.86
CLK1-213ENST00000492793 RNPEPL1Q9HAU8 725 aa3.44□□□□□ -1.86
CLK1-213ENST00000492793 IL1RAPL2Q9NP60 686 aa3.44□□□□□ -1.86
CLK1-213ENST00000492793 CNIH4Q9P003 139 aa3.44□□□□□ -1.86
CLK1-213ENST00000492793 DBF4Q9UBU7 674 aaPredicted RBP3.44□□□□□ -1.86
CLK1-213ENST00000492793 LNPEPQ9UIQ6 1025 aa3.44□□□□□ -1.86
CLK1-213ENST00000492793 FBXL4Q9UKA2 621 aa3.44□□□□□ -1.86
CLK1-213ENST00000492793 STX8Q9UNK0 236 aa3.44□□□□□ -1.86
CLK1-213ENST00000492793 A0A0A6YYC8 382 aaPredicted RBP3.43□□□□□ -1.86
CLK1-213ENST00000492793 A0A1W2PRV1 198 aa3.43□□□□□ -1.86
CLK1-213ENST00000492793 ANKDD1BA6NHY2 528 aa3.43□□□□□ -1.86
CLK1-213ENST00000492793 I3L1I5 382 aaPredicted RBP3.43□□□□□ -1.86
CLK1-213ENST00000492793 SURF4O15260 269 aa3.43□□□□□ -1.86
CLK1-213ENST00000492793 MAGEB2O15479 319 aa3.43□□□□□ -1.86
CLK1-213ENST00000492793 LETM1O95202 739 aaPredicted RBP3.43□□□□□ -1.86
CLK1-213ENST00000492793 CD59P13987 128 aa3.43□□□□□ -1.86
CLK1-213ENST00000492793 FKBP1BP68106 108 aa3.43□□□□□ -1.86
CLK1-213ENST00000492793 RPP38P78345 283 aaKnown RBP3.43□□□□□ -1.86
CLK1-213ENST00000492793 DHODHQ02127 395 aa3.43□□□□□ -1.86
CLK1-213ENST00000492793 TEFQ10587 303 aa3.43□□□□□ -1.86
CLK1-213ENST00000492793 MTF1Q14872 753 aa3.43□□□□□ -1.86
CLK1-213ENST00000492793 RPS6KA1Q15418 735 aa3.43□□□□□ -1.86
CLK1-213ENST00000492793 TAB1Q15750 504 aa3.43□□□□□ -1.86
CLK1-213ENST00000492793 MAPK11Q15759 364 aa3.43□□□□□ -1.86
CLK1-213ENST00000492793 FAM189A2Q15884 450 aa3.43□□□□□ -1.86
CLK1-213ENST00000492793 FAM106AQ4KMX7 169 aa3.43□□□□□ -1.86
CLK1-213ENST00000492793 CEP85LQ5SZL2 805 aa3.43□□□□□ -1.86
CLK1-213ENST00000492793 KLHL10Q6JEL2 608 aa3.43□□□□□ -1.86
CLK1-213ENST00000492793 Q71RC1 249 aaPredicted RBP3.43□□□□□ -1.86
CLK1-213ENST00000492793 ZER1Q7Z7L7 766 aa3.43□□□□□ -1.86
CLK1-213ENST00000492793 TDHQ8IZJ6 230 aa3.43□□□□□ -1.86
CLK1-213ENST00000492793 THEM5Q8N1Q8 247 aa3.43□□□□□ -1.86
CLK1-213ENST00000492793 RPLP0P6Q8NHW5 317 aa3.43□□□□□ -1.86
CLK1-213ENST00000492793 ST7LQ8TDW4 575 aa3.43□□□□□ -1.86
CLK1-213ENST00000492793 SEPT8Q92599 483 aa3.43□□□□□ -1.86
CLK1-213ENST00000492793 ZNF274Q96GC6 653 aaPredicted RBP3.43□□□□□ -1.86
CLK1-213ENST00000492793 PANX3Q96QZ0 392 aa3.43□□□□□ -1.86
CLK1-213ENST00000492793 ZNF350Q9GZX5 532 aa3.43□□□□□ -1.86
CLK1-213ENST00000492793 AKIRIN1Q9H9L7 192 aaPredicted RBP3.43□□□□□ -1.86
CLK1-213ENST00000492793 MTRRQ9UBK8 725 aa3.43□□□□□ -1.86
CLK1-213ENST00000492793 BAIAP2L1Q9UHR4 511 aa3.43□□□□□ -1.86
CLK1-213ENST00000492793 FBXW2Q9UKT8 454 aa3.43□□□□□ -1.86
CLK1-213ENST00000492793 TMED7Q9Y3B3 224 aa3.43□□□□□ -1.86
CLK1-213ENST00000492793 PFASO15067 1338 aa3.43□□□□□ -1.86
CLK1-213ENST00000492793 IGLV7-46A0A075B6I9 117 aa3.42□□□□□ -1.86
CLK1-213ENST00000492793 A0A087X002 238 aa3.42□□□□□ -1.86
CLK1-213ENST00000492793 A0A0U1RQG5 324 aaPredicted RBP3.42□□□□□ -1.86
CLK1-213ENST00000492793 MAGEB16A2A368 324 aa3.42□□□□□ -1.86
CLK1-213ENST00000492793 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.42□□□□□ -1.86
CLK1-213ENST00000492793 TCP10L2B9ZVM9 353 aa3.42□□□□□ -1.86
CLK1-213ENST00000492793 M0R296 226 aa3.42□□□□□ -1.86
CLK1-213ENST00000492793 GAS8O95995 478 aa3.42□□□□□ -1.86
CLK1-213ENST00000492793 CALCAP01258 141 aa3.42□□□□□ -1.86
CLK1-213ENST00000492793 RPLP0P05388 317 aaKnown RBP3.42□□□□□ -1.86
CLK1-213ENST00000492793 HMOX1P09601 288 aa3.42□□□□□ -1.86
CLK1-213ENST00000492793 TYMPP19971 482 aa3.42□□□□□ -1.86
CLK1-213ENST00000492793 GIFP27352 417 aa3.42□□□□□ -1.86
CLK1-213ENST00000492793 SRD5A2P31213 254 aa3.42□□□□□ -1.86
CLK1-213ENST00000492793 OR1D5P58170 312 aa3.42□□□□□ -1.86
CLK1-213ENST00000492793 SLC34A1Q06495 639 aa3.42□□□□□ -1.86
CLK1-213ENST00000492793 CCDC6Q16204 474 aa3.42□□□□□ -1.86
CLK1-213ENST00000492793 MTHFSDQ2M296 383 aaKnown RBP3.42□□□□□ -1.86
CLK1-213ENST00000492793 ZNF789Q5FWF6 425 aa3.42□□□□□ -1.86
CLK1-213ENST00000492793 ZNF770Q6IQ21 691 aaPredicted RBP3.42□□□□□ -1.86
CLK1-213ENST00000492793 SLC27A4Q6P1M0 643 aa3.42□□□□□ -1.86
CLK1-213ENST00000492793 C15orf52Q6ZUT6 534 aaKnown RBP3.42□□□□□ -1.86
CLK1-213ENST00000492793 RFPL4BQ6ZWI9 263 aa3.42□□□□□ -1.86
CLK1-213ENST00000492793 RAPH1Q70E73 1250 aa3.42□□□□□ -1.86
CLK1-213ENST00000492793 ZC3H3Q8IXZ2 948 aaKnown RBP3.42□□□□□ -1.86
CLK1-213ENST00000492793 KLHDC8AQ8IYD2 350 aa3.42□□□□□ -1.86
CLK1-213ENST00000492793 ZNF614Q8N883 585 aa3.42□□□□□ -1.86
CLK1-213ENST00000492793 WDSUB1Q8N9V3 476 aa3.42□□□□□ -1.86
CLK1-213ENST00000492793 LPCAT1Q8NF37 534 aa3.42□□□□□ -1.86
CLK1-213ENST00000492793 NUP37Q8NFH4 326 aa3.42□□□□□ -1.86
CLK1-213ENST00000492793 OR13C5Q8NGS8 318 aa3.42□□□□□ -1.86
CLK1-213ENST00000492793 PSMA8Q8TAA3 256 aa3.42□□□□□ -1.86
CLK1-213ENST00000492793 ATP8B4Q8TF62 1192 aa3.42□□□□□ -1.86
CLK1-213ENST00000492793 PTP4A1Q93096 173 aa3.42□□□□□ -1.86
CLK1-213ENST00000492793 PRMT1Q99873 361 aaKnown RBP3.42□□□□□ -1.86
CLK1-213ENST00000492793 ASCL2Q99929 193 aa3.42□□□□□ -1.86
CLK1-213ENST00000492793 NAPBQ9H115 298 aa3.42□□□□□ -1.86
CLK1-213ENST00000492793 RSPH9Q9H1X1 276 aaPredicted RBP3.42□□□□□ -1.86
CLK1-213ENST00000492793 TEX10Q9NXF1 929 aaPredicted RBP3.42□□□□□ -1.86
CLK1-213ENST00000492793 SPG21Q9NZD8 308 aa3.42□□□□□ -1.86
CLK1-213ENST00000492793 RNF123Q5XPI4 1314 aa3.42□□□□□ -1.86
CLK1-213ENST00000492793 hCG_38984A0A1B0GV85 526 aa3.41□□□□□ -1.86
CLK1-213ENST00000492793 FAM149AA5PLN7 773 aa3.41□□□□□ -1.86
CLK1-213ENST00000492793 ZNF732B4DXR9 585 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms