RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 USP10Q14694 798 aaKnown RBP7.87□□□□□ -1.15
SMARCB1-207ENST00000491967 FASTKD3Q14CZ7 662 aaKnown RBP7.87□□□□□ -1.15
SMARCB1-207ENST00000491967 ABRAXAS2Q15018 415 aa7.87□□□□□ -1.15
SMARCB1-207ENST00000491967 NSDHLQ15738 373 aa7.87□□□□□ -1.15
SMARCB1-207ENST00000491967 BTBD16Q32M84 506 aa7.87□□□□□ -1.15
SMARCB1-207ENST00000491967 MINDY4Q4G0A6 757 aa7.87□□□□□ -1.15
SMARCB1-207ENST00000491967 SFT2D3Q587I9 215 aa7.87□□□□□ -1.15
SMARCB1-207ENST00000491967 HP1BP3Q5SSJ5 553 aaPredicted RBP7.87□□□□□ -1.15
SMARCB1-207ENST00000491967 ZNF787Q6DD87 383 aa7.87□□□□□ -1.15
SMARCB1-207ENST00000491967 TUBA3EQ6PEY2 450 aa7.87□□□□□ -1.15
SMARCB1-207ENST00000491967 NXPE4Q6UWF7 544 aa7.87□□□□□ -1.15
SMARCB1-207ENST00000491967 SLCO4C1Q6ZQN7 724 aa7.87□□□□□ -1.15
SMARCB1-207ENST00000491967 QSOX2Q6ZRP7 698 aa7.87□□□□□ -1.15
SMARCB1-207ENST00000491967 THOC6Q86W42 341 aaKnown RBP7.87□□□□□ -1.15
SMARCB1-207ENST00000491967 ZNF227Q86WZ6 799 aa7.87□□□□□ -1.15
SMARCB1-207ENST00000491967 CRLF3Q8IUI8 442 aa7.87□□□□□ -1.15
SMARCB1-207ENST00000491967 SIAH3Q8IW03 269 aa7.87□□□□□ -1.15
SMARCB1-207ENST00000491967 CEP97Q8IW35 865 aa7.87□□□□□ -1.15
SMARCB1-207ENST00000491967 BEST3Q8N1M1 668 aa7.87□□□□□ -1.15
SMARCB1-207ENST00000491967 NKAPQ8N5F7 415 aaKnown RBP7.87□□□□□ -1.15
SMARCB1-207ENST00000491967 GPATCH11Q8N954 259 aa7.87□□□□□ -1.15
SMARCB1-207ENST00000491967 NFAM1Q8NET5 270 aaPredicted RBP7.87□□□□□ -1.15
SMARCB1-207ENST00000491967 TRPV3Q8NET8 790 aa7.87□□□□□ -1.15
SMARCB1-207ENST00000491967 OR5T3Q8NGG3 340 aa7.87□□□□□ -1.15
SMARCB1-207ENST00000491967 UTP15Q8TED0 518 aaKnown RBP7.87□□□□□ -1.15
SMARCB1-207ENST00000491967 THAP3Q8WTV1 239 aaPredicted RBP7.87□□□□□ -1.15
SMARCB1-207ENST00000491967 ANKRD49Q8WVL7 239 aa7.87□□□□□ -1.15
SMARCB1-207ENST00000491967 SLC5A11Q8WWX8 675 aa7.87□□□□□ -1.15
SMARCB1-207ENST00000491967 RHBDF1Q96CC6 855 aa7.87□□□□□ -1.15
SMARCB1-207ENST00000491967 PEX11GQ96HA9 241 aa7.87□□□□□ -1.15
SMARCB1-207ENST00000491967 SEC16BQ96JE7 1060 aa7.87□□□□□ -1.15
SMARCB1-207ENST00000491967 PDLIM2Q96JY6 352 aa7.87□□□□□ -1.15
SMARCB1-207ENST00000491967 PITHD1Q9GZP4 211 aaPredicted RBP7.87□□□□□ -1.15
SMARCB1-207ENST00000491967 NT5DC2Q9H857 520 aa7.87□□□□□ -1.15
SMARCB1-207ENST00000491967 TRMT1Q9NXH9 659 aaKnown RBP7.87□□□□□ -1.15
SMARCB1-207ENST00000491967 RNF14Q9UBS8 474 aa7.87□□□□□ -1.15
SMARCB1-207ENST00000491967 CHMP2BQ9UQN3 213 aa7.87□□□□□ -1.15
SMARCB1-207ENST00000491967 ENTPD4Q9Y227 616 aa7.87□□□□□ -1.15
SMARCB1-207ENST00000491967 OARD1Q9Y530 152 aa7.87□□□□□ -1.15
SMARCB1-207ENST00000491967 SAR1BQ9Y6B6 198 aa7.87□□□□□ -1.15
SMARCB1-207ENST00000491967 DNAJC13O75165 2243 aa7.86□□□□□ -1.15
SMARCB1-207ENST00000491967 TCRBV16S1A1N1A0A5B0 115 aa7.86□□□□□ -1.15
SMARCB1-207ENST00000491967 C4orf51C9J302 202 aa7.86□□□□□ -1.15
SMARCB1-207ENST00000491967 TTI1O43156 1089 aa7.86□□□□□ -1.15
SMARCB1-207ENST00000491967 NDUFS4O43181 175 aa7.86□□□□□ -1.15
SMARCB1-207ENST00000491967 PRAMEF4O60810 478 aa7.86□□□□□ -1.15
SMARCB1-207ENST00000491967 ZG16O60844 167 aa7.86□□□□□ -1.15
SMARCB1-207ENST00000491967 NEURL1O76050 574 aa7.86□□□□□ -1.15
SMARCB1-207ENST00000491967 GUCA1CO95843 209 aa7.86□□□□□ -1.15
SMARCB1-207ENST00000491967 ZNF888P0CJ79 500 aaPredicted RBP7.86□□□□□ -1.15
SMARCB1-207ENST00000491967 JAK1P23458 1154 aa7.86□□□□□ -1.15
SMARCB1-207ENST00000491967 GSTM2P28161 218 aa7.86□□□□□ -1.15
SMARCB1-207ENST00000491967 TRHRP34981 398 aaPredicted RBP7.86□□□□□ -1.15
SMARCB1-207ENST00000491967 CA7P43166 264 aa7.86□□□□□ -1.15
SMARCB1-207ENST00000491967 RPL21P46778 160 aaKnown RBP7.86□□□□□ -1.15
SMARCB1-207ENST00000491967 GPR143P51810 404 aa7.86□□□□□ -1.15
SMARCB1-207ENST00000491967 KCNK10P57789 538 aa7.86□□□□□ -1.15
SMARCB1-207ENST00000491967 SKP1P63208 163 aa7.86□□□□□ -1.15
SMARCB1-207ENST00000491967 ZNF33BQ06732 778 aa7.86□□□□□ -1.15
SMARCB1-207ENST00000491967 RGS1Q08116 209 aa7.86□□□□□ -1.15
SMARCB1-207ENST00000491967 PCDH1Q08174 1060 aa7.86□□□□□ -1.15
SMARCB1-207ENST00000491967 ART3Q13508 389 aa7.86□□□□□ -1.15
SMARCB1-207ENST00000491967 TERF2Q15554 542 aa7.86□□□□□ -1.15
SMARCB1-207ENST00000491967 MEP1AQ16819 746 aa7.86□□□□□ -1.15
SMARCB1-207ENST00000491967 ADPRMQ3LIE5 342 aa7.86□□□□□ -1.15
SMARCB1-207ENST00000491967 DEFB134Q4QY38 66 aa7.86□□□□□ -1.15
SMARCB1-207ENST00000491967 KRTCAP3Q53RY4 240 aa7.86□□□□□ -1.15
SMARCB1-207ENST00000491967 ZNF766Q5HY98 468 aa7.86□□□□□ -1.15
SMARCB1-207ENST00000491967 PRAMEF9Q5VWM5 478 aa7.86□□□□□ -1.15
SMARCB1-207ENST00000491967 C1QL3Q5VWW1 255 aa7.86□□□□□ -1.15
SMARCB1-207ENST00000491967 PAPD4Q6PIY7 484 aaKnown RBP7.86□□□□□ -1.15
SMARCB1-207ENST00000491967 Q6ZPB1 254 aaPredicted RBP7.86□□□□□ -1.15
SMARCB1-207ENST00000491967 ABHD13Q7L211 337 aa7.86□□□□□ -1.15
SMARCB1-207ENST00000491967 CHERPQ8IWX8 916 aaKnown RBP7.86□□□□□ -1.15
SMARCB1-207ENST00000491967 SCUBE1Q8IWY4 988 aa7.86□□□□□ -1.15
SMARCB1-207ENST00000491967 KLHL7Q8IXQ5 586 aa7.86□□□□□ -1.15
SMARCB1-207ENST00000491967 TBC1D19Q8N5T2 526 aa7.86□□□□□ -1.15
SMARCB1-207ENST00000491967 ZCCHC10Q8TBK6 192 aa7.86□□□□□ -1.15
SMARCB1-207ENST00000491967 ITLN2Q8WWU7 325 aaPredicted RBP7.86□□□□□ -1.15
SMARCB1-207ENST00000491967 TSLPQ969D9 159 aa7.86□□□□□ -1.15
SMARCB1-207ENST00000491967 WDR34Q96EX3 536 aa7.86□□□□□ -1.15
SMARCB1-207ENST00000491967 CFAP36Q96G28 342 aa7.86□□□□□ -1.15
SMARCB1-207ENST00000491967 UBXN10Q96LJ8 280 aa7.86□□□□□ -1.15
SMARCB1-207ENST00000491967 SIGLEC12Q96PQ1 595 aa7.86□□□□□ -1.15
SMARCB1-207ENST00000491967 LPAR4Q99677 370 aa7.86□□□□□ -1.15
SMARCB1-207ENST00000491967 AIF1LQ9BQI0 150 aa7.86□□□□□ -1.15
SMARCB1-207ENST00000491967 TRIM51Q9BSJ1 452 aa7.86□□□□□ -1.15
SMARCB1-207ENST00000491967 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.86□□□□□ -1.15
SMARCB1-207ENST00000491967 RHOJQ9H4E5 214 aa7.86□□□□□ -1.15
SMARCB1-207ENST00000491967 EHD1Q9H4M9 534 aa7.86□□□□□ -1.15
SMARCB1-207ENST00000491967 KLHL31Q9H511 634 aa7.86□□□□□ -1.15
SMARCB1-207ENST00000491967 KCNK13Q9HB14 408 aa7.86□□□□□ -1.15
SMARCB1-207ENST00000491967 PPANQ9NQ55 473 aaKnown RBP7.86□□□□□ -1.15
SMARCB1-207ENST00000491967 SMYD2Q9NRG4 433 aa7.86□□□□□ -1.15
SMARCB1-207ENST00000491967 NSMCE4AQ9NXX6 385 aa7.86□□□□□ -1.15
SMARCB1-207ENST00000491967 SLC22A14Q9Y267 594 aa7.86□□□□□ -1.15
SMARCB1-207ENST00000491967 KLF2Q9Y5W3 355 aaPredicted RBP7.86□□□□□ -1.15
SMARCB1-207ENST00000491967 KCNE2Q9Y6J6 123 aa7.86□□□□□ -1.15
SMARCB1-207ENST00000491967 ZNF407Q9C0G0 2248 aa7.86□□□□□ -1.15
SMARCB1-207ENST00000491967 FAM95CA0A1B0GW59 222 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms