RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 FASTKD3Q14CZ7 662 aaKnown RBP15.63■□□□□ 0.09
PDLIM2-217ENST00000491330 MEP1AQ16819 746 aa15.63■□□□□ 0.09
PDLIM2-217ENST00000491330 PAGE2BQ5JRK9 111 aa15.63■□□□□ 0.09
PDLIM2-217ENST00000491330 CATSPEREQ5SY80 951 aa15.63■□□□□ 0.09
PDLIM2-217ENST00000491330 GRTP1Q5TC63 336 aa15.63■□□□□ 0.09
PDLIM2-217ENST00000491330 SULT1C3Q6IMI6 304 aa15.63■□□□□ 0.09
PDLIM2-217ENST00000491330 SBSNQ6UWP8 590 aa15.63■□□□□ 0.09
PDLIM2-217ENST00000491330 ANKRD37Q7Z713 158 aa15.63■□□□□ 0.09
PDLIM2-217ENST00000491330 CTAGE6Q86UF2 777 aa15.63■□□□□ 0.09
PDLIM2-217ENST00000491330 CCDC25Q86WR0 208 aa15.63■□□□□ 0.09
PDLIM2-217ENST00000491330 GPSM1Q86YR5 675 aa15.63■□□□□ 0.09
PDLIM2-217ENST00000491330 RELL1Q8IUW5 271 aa15.63■□□□□ 0.09
PDLIM2-217ENST00000491330 CTAGE4Q8IX94 777 aa15.63■□□□□ 0.09
PDLIM2-217ENST00000491330 FAM98AQ8NCA5 519 aaKnown RBP15.63■□□□□ 0.09
PDLIM2-217ENST00000491330 C7orf57Q8NEG2 295 aa15.63■□□□□ 0.09
PDLIM2-217ENST00000491330 DNAJB8Q8NHS0 232 aa15.63■□□□□ 0.09
PDLIM2-217ENST00000491330 CCT6BQ92526 530 aa15.63■□□□□ 0.09
PDLIM2-217ENST00000491330 IMMP1LQ96LU5 166 aa15.63■□□□□ 0.09
PDLIM2-217ENST00000491330 MCMBPQ9BTE3 642 aa15.63■□□□□ 0.09
PDLIM2-217ENST00000491330 DERL2Q9GZP9 239 aa15.63■□□□□ 0.09
PDLIM2-217ENST00000491330 GPRC5BQ9NZH0 403 aa15.63■□□□□ 0.09
PDLIM2-217ENST00000491330 MRPS33Q9Y291 106 aaKnown RBP15.63■□□□□ 0.09
PDLIM2-217ENST00000491330 PSAT1Q9Y617 370 aa15.63■□□□□ 0.09
PDLIM2-217ENST00000491330 BOD1L1Q8NFC6 3051 aa15.63■□□□□ 0.09
PDLIM2-217ENST00000491330 ASH1LQ9NR48 2969 aaKnown RBP15.62■□□□□ 0.09
PDLIM2-217ENST00000491330 A0A1B0GUH1 482 aa15.62■□□□□ 0.09
PDLIM2-217ENST00000491330 TCRBV9S1A1TA0A576 114 aa15.62■□□□□ 0.09
PDLIM2-217ENST00000491330 CCDC189A1A4V9 331 aa15.62■□□□□ 0.09
PDLIM2-217ENST00000491330 FAM159BA6NKW6 160 aa15.62■□□□□ 0.09
PDLIM2-217ENST00000491330 JRKO75564 520 aa15.62■□□□□ 0.09
PDLIM2-217ENST00000491330 ZNF888P0CJ79 500 aaPredicted RBP15.62■□□□□ 0.09
PDLIM2-217ENST00000491330 CCDC166P0CW27 439 aa15.62■□□□□ 0.09
PDLIM2-217ENST00000491330 SSTR1P30872 391 aa15.62■□□□□ 0.09
PDLIM2-217ENST00000491330 SOX11P35716 441 aa15.62■□□□□ 0.09
PDLIM2-217ENST00000491330 CASP6P55212 293 aa15.62■□□□□ 0.09
PDLIM2-217ENST00000491330 SRSF1Q07955 248 aaKnown RBP eCLIP15.62■□□□□ 0.09
PDLIM2-217ENST00000491330 TSNQ15631 228 aaKnown RBP15.62■□□□□ 0.09
PDLIM2-217ENST00000491330 SFT2D3Q587I9 215 aa15.62■□□□□ 0.09
PDLIM2-217ENST00000491330 PAPD4Q6PIY7 484 aaKnown RBP15.62■□□□□ 0.09
PDLIM2-217ENST00000491330 TMIGD1Q6UXZ0 262 aa15.62■□□□□ 0.09
PDLIM2-217ENST00000491330 TBC1D1Q86TI0 1168 aaPredicted RBP15.62■□□□□ 0.09
PDLIM2-217ENST00000491330 TMEM151BQ8IW70 566 aa15.62■□□□□ 0.09
PDLIM2-217ENST00000491330 CYP4X1Q8N118 509 aa15.62■□□□□ 0.09
PDLIM2-217ENST00000491330 CEP112Q8N8E3 955 aa15.62■□□□□ 0.09
PDLIM2-217ENST00000491330 ZNF740Q8NDX6 193 aa15.62■□□□□ 0.09
PDLIM2-217ENST00000491330 CATSPER1Q8NEC5 780 aa15.62■□□□□ 0.09
PDLIM2-217ENST00000491330 ADAMTS18Q8TE60 1221 aa15.62■□□□□ 0.09
PDLIM2-217ENST00000491330 PTCHD1Q96NR3 888 aa15.62■□□□□ 0.09
PDLIM2-217ENST00000491330 UTP23Q9BRU9 249 aaKnown RBP15.62■□□□□ 0.09
PDLIM2-217ENST00000491330 PLA2G3Q9NZ20 509 aa15.62■□□□□ 0.09
PDLIM2-217ENST00000491330 CD274Q9NZQ7 290 aa15.62■□□□□ 0.09
PDLIM2-217ENST00000491330 PLEKHB1Q9UF11 243 aaPredicted RBP15.62■□□□□ 0.09
PDLIM2-217ENST00000491330 UBR5O95071 2799 aaPredicted RBP15.62■□□□□ 0.09
PDLIM2-217ENST00000491330 MED13Q9UHV7 2174 aa15.61■□□□□ 0.09
PDLIM2-217ENST00000491330 NCF1BA6NI72 391 aaPredicted RBP15.61■□□□□ 0.09
PDLIM2-217ENST00000491330 NCF1CA8MVU1 366 aaPredicted RBP15.61■□□□□ 0.09
PDLIM2-217ENST00000491330 CHST10O43529 356 aa15.61■□□□□ 0.09
PDLIM2-217ENST00000491330 PRAMEF2O60811 474 aa15.61■□□□□ 0.09
PDLIM2-217ENST00000491330 B4GALT2O60909 372 aa15.61■□□□□ 0.09
PDLIM2-217ENST00000491330 CDC123O75794 336 aaPredicted RBP15.61■□□□□ 0.09
PDLIM2-217ENST00000491330 WDPCPO95876 746 aa15.61■□□□□ 0.09
PDLIM2-217ENST00000491330 ITGAMP11215 1152 aa15.61■□□□□ 0.09
PDLIM2-217ENST00000491330 NCF1P14598 390 aaPredicted RBP15.61■□□□□ 0.09
PDLIM2-217ENST00000491330 CD46P15529 392 aa15.61■□□□□ 0.09
PDLIM2-217ENST00000491330 CRABP2P29373 138 aa15.61■□□□□ 0.09
PDLIM2-217ENST00000491330 PHBP35232 272 aa15.61■□□□□ 0.09
PDLIM2-217ENST00000491330 HNF4AP41235 474 aa15.61■□□□□ 0.09
PDLIM2-217ENST00000491330 MAGEA4P43358 317 aa15.61■□□□□ 0.09
PDLIM2-217ENST00000491330 REEP5Q00765 189 aa15.61■□□□□ 0.09
PDLIM2-217ENST00000491330 LAPTM5Q13571 262 aa15.61■□□□□ 0.09
PDLIM2-217ENST00000491330 TGFBIQ15582 683 aa15.61■□□□□ 0.09
PDLIM2-217ENST00000491330 PPP1R3AQ16821 1122 aa15.61■□□□□ 0.09
PDLIM2-217ENST00000491330 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.61■□□□□ 0.09
PDLIM2-217ENST00000491330 ACER2Q5QJU3 275 aa15.61■□□□□ 0.09
PDLIM2-217ENST00000491330 PRSS41Q7RTY9 318 aa15.61■□□□□ 0.09
PDLIM2-217ENST00000491330 AFAP1L2Q8N4X5 818 aa15.61■□□□□ 0.09
PDLIM2-217ENST00000491330 SNX31Q8N9S9 440 aa15.61■□□□□ 0.09
PDLIM2-217ENST00000491330 SRFBP1Q8NEF9 429 aaKnown RBP15.61■□□□□ 0.09
PDLIM2-217ENST00000491330 STAG3L4Q8TBR4 150 aa15.61■□□□□ 0.09
PDLIM2-217ENST00000491330 UBE2E3Q969T4 207 aa15.61■□□□□ 0.09
PDLIM2-217ENST00000491330 OR4K3Q96R72 315 aa15.61■□□□□ 0.09
PDLIM2-217ENST00000491330 RBBP8Q99708 897 aa15.61■□□□□ 0.09
PDLIM2-217ENST00000491330 BARD1Q99728 777 aaKnown RBP15.61■□□□□ 0.09
PDLIM2-217ENST00000491330 ROGDIQ9GZN7 287 aa15.61■□□□□ 0.09
PDLIM2-217ENST00000491330 COPS7BQ9H9Q2 264 aaPredicted RBP15.61■□□□□ 0.09
PDLIM2-217ENST00000491330 NMRAL1Q9HBL8 299 aa15.61■□□□□ 0.09
PDLIM2-217ENST00000491330 MMP25Q9NPA2 562 aa15.61■□□□□ 0.09
PDLIM2-217ENST00000491330 DNAJC11Q9NVH1 559 aa15.61■□□□□ 0.09
PDLIM2-217ENST00000491330 RNF112Q9ULX5 631 aa15.61■□□□□ 0.09
PDLIM2-217ENST00000491330 SH2B3Q9UQQ2 575 aa15.61■□□□□ 0.09
PDLIM2-217ENST00000491330 SPACA6W5XKT8 324 aa15.61■□□□□ 0.09
PDLIM2-217ENST00000491330 NBASA2RRP1 2371 aa15.61■□□□□ 0.09
PDLIM2-217ENST00000491330 TNRC6AQ8NDV7 1962 aaKnown RBP15.6■□□□□ 0.09
PDLIM2-217ENST00000491330 ZNF860A6NHJ4 632 aa15.6■□□□□ 0.09
PDLIM2-217ENST00000491330 SEMA7AO75326 666 aa15.6■□□□□ 0.09
PDLIM2-217ENST00000491330 STK16O75716 305 aa15.6■□□□□ 0.09
PDLIM2-217ENST00000491330 RAB8AP61006 207 aa15.6■□□□□ 0.09
PDLIM2-217ENST00000491330 RAB10P61026 200 aa15.6■□□□□ 0.09
PDLIM2-217ENST00000491330 OC90Q02509 493 aaPredicted RBP15.6■□□□□ 0.09
PDLIM2-217ENST00000491330 TOR1AIP1Q5JTV8 583 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms