RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 NDUFA9Q16795 377 aa17.74■□□□□ 0.43
MCF2L-230ENST00000491028 SPIN4Q56A73 249 aa17.74■□□□□ 0.43
MCF2L-230ENST00000491028 YOD1Q5VVQ6 348 aaPredicted RBP17.74■□□□□ 0.43
MCF2L-230ENST00000491028 TMEM214Q6NUQ4 689 aaKnown RBP17.74■□□□□ 0.43
MCF2L-230ENST00000491028 TRIM40Q6P9F5 258 aa17.74■□□□□ 0.43
MCF2L-230ENST00000491028 ACAD11Q709F0 780 aa17.74■□□□□ 0.43
MCF2L-230ENST00000491028 ABHD13Q7L211 337 aa17.74■□□□□ 0.43
MCF2L-230ENST00000491028 RAB11FIP2Q7L804 512 aa17.74■□□□□ 0.43
MCF2L-230ENST00000491028 OR2L5Q8NG80 312 aa17.74■□□□□ 0.43
MCF2L-230ENST00000491028 RFWD2Q8NHY2 731 aa17.74■□□□□ 0.43
MCF2L-230ENST00000491028 TUBGCP3Q96CW5 907 aa17.74■□□□□ 0.43
MCF2L-230ENST00000491028 MS4A6EQ96DS6 147 aa17.74■□□□□ 0.43
MCF2L-230ENST00000491028 FAM107BQ9H098 131 aa17.74■□□□□ 0.43
MCF2L-230ENST00000491028 AHSPQ9NZD4 102 aa17.74■□□□□ 0.43
MCF2L-230ENST00000491028 RUVBL1Q9Y265 456 aaKnown RBP17.74■□□□□ 0.43
MCF2L-230ENST00000491028 DMXL1Q9Y485 3027 aa17.73■□□□□ 0.43
MCF2L-230ENST00000491028 ATP6AP2A0A1C7CYW4 349 aa17.73■□□□□ 0.43
MCF2L-230ENST00000491028 DIAPH2O60879 1101 aa17.73■□□□□ 0.43
MCF2L-230ENST00000491028 ATP6AP2O75787 350 aa17.73■□□□□ 0.43
MCF2L-230ENST00000491028 STATHP02808 62 aa17.73■□□□□ 0.43
MCF2L-230ENST00000491028 CTSBP07858 339 aa17.73■□□□□ 0.43
MCF2L-230ENST00000491028 IDH3AP50213 366 aa17.73■□□□□ 0.43
MCF2L-230ENST00000491028 RAB15P59190 212 aa17.73■□□□□ 0.43
MCF2L-230ENST00000491028 SMU1Q2TAY7 513 aa17.73■□□□□ 0.43
MCF2L-230ENST00000491028 FAM214AQ32MH5 1076 aa17.73■□□□□ 0.43
MCF2L-230ENST00000491028 SLC9B1Q4ZJI4 515 aa17.73■□□□□ 0.43
MCF2L-230ENST00000491028 ATP6AP1LQ52LC2 224 aa17.73■□□□□ 0.43
MCF2L-230ENST00000491028 VWA5B1Q5TIE3 1220 aa17.73■□□□□ 0.43
MCF2L-230ENST00000491028 NIPAL1Q6NVV3 410 aa17.73■□□□□ 0.43
MCF2L-230ENST00000491028 PPP1R3BQ86XI6 285 aa17.73■□□□□ 0.43
MCF2L-230ENST00000491028 METTL4Q8N3J2 472 aa17.73■□□□□ 0.43
MCF2L-230ENST00000491028 ARHGEF39Q8N4T4 335 aa17.73■□□□□ 0.43
MCF2L-230ENST00000491028 KCT2Q8NC54 265 aa17.73■□□□□ 0.43
MCF2L-230ENST00000491028 ACTRT2Q8TDY3 377 aa17.73■□□□□ 0.43
MCF2L-230ENST00000491028 RGMAQ96B86 450 aa17.73■□□□□ 0.43
MCF2L-230ENST00000491028 THOC1Q96FV9 657 aaKnown RBP17.73■□□□□ 0.43
MCF2L-230ENST00000491028 PPP1R36Q96LQ0 422 aa17.73■□□□□ 0.43
MCF2L-230ENST00000491028 F2RL3Q96RI0 385 aa17.73■□□□□ 0.43
MCF2L-230ENST00000491028 MACROD1Q9BQ69 325 aa17.73■□□□□ 0.43
MCF2L-230ENST00000491028 ROGDIQ9GZN7 287 aa17.73■□□□□ 0.43
MCF2L-230ENST00000491028 AICDAQ9GZX7 198 aa17.73■□□□□ 0.43
MCF2L-230ENST00000491028 SPRTNQ9H040 489 aaPredicted RBP17.73■□□□□ 0.43
MCF2L-230ENST00000491028 LRTM1Q9HBL6 345 aa17.73■□□□□ 0.43
MCF2L-230ENST00000491028 C1orf109Q9NX04 203 aa17.73■□□□□ 0.43
MCF2L-230ENST00000491028 DCTN4Q9UJW0 460 aa17.73■□□□□ 0.43
MCF2L-230ENST00000491028 SRPK3Q9UPE1 567 aa17.73■□□□□ 0.43
MCF2L-230ENST00000491028 TMED5Q9Y3A6 229 aa17.73■□□□□ 0.43
MCF2L-230ENST00000491028 SLC22A7Q9Y694 548 aa17.73■□□□□ 0.43
MCF2L-230ENST00000491028 A0A088AWK7 358 aa17.72■□□□□ 0.43
MCF2L-230ENST00000491028 A0A0G2JND7 137 aa17.72■□□□□ 0.43
MCF2L-230ENST00000491028 PLPP1O14494 284 aa17.72■□□□□ 0.43
MCF2L-230ENST00000491028 POLR1CO15160 346 aaPredicted RBP17.72■□□□□ 0.43
MCF2L-230ENST00000491028 ERI3O43414 337 aaKnown RBP17.72■□□□□ 0.43
MCF2L-230ENST00000491028 FAM107AO95990 144 aa17.72■□□□□ 0.43
MCF2L-230ENST00000491028 PRR35P0CG20 571 aa17.72■□□□□ 0.43
MCF2L-230ENST00000491028 SMIM10L1P0DMW3 83 aa17.72■□□□□ 0.43
MCF2L-230ENST00000491028 ZNF10P21506 573 aaPredicted RBP17.72■□□□□ 0.43
MCF2L-230ENST00000491028 EPHA3P29320 983 aa17.72■□□□□ 0.43
MCF2L-230ENST00000491028 GCGRP47871 477 aa17.72■□□□□ 0.43
MCF2L-230ENST00000491028 ARSFP54793 590 aa17.72■□□□□ 0.43
MCF2L-230ENST00000491028 ACSM2AQ08AH3 577 aa17.72■□□□□ 0.43
MCF2L-230ENST00000491028 TBL3Q12788 808 aaKnown RBP17.72■□□□□ 0.43
MCF2L-230ENST00000491028 MAD2L1Q13257 205 aaPredicted RBP17.72■□□□□ 0.43
MCF2L-230ENST00000491028 MUM1Q2TAK8 710 aa17.72■□□□□ 0.43
MCF2L-230ENST00000491028 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.72■□□□□ 0.43
MCF2L-230ENST00000491028 SPDYAQ5MJ70 313 aa17.72■□□□□ 0.43
MCF2L-230ENST00000491028 ACSM2BQ68CK6 577 aa17.72■□□□□ 0.43
MCF2L-230ENST00000491028 ABHD17CQ6PCB6 329 aa17.72■□□□□ 0.43
MCF2L-230ENST00000491028 LARP4Q71RC2 724 aaKnown RBP eCLIP17.72■□□□□ 0.43
MCF2L-230ENST00000491028 PAGE2Q7Z2X7 111 aa17.72■□□□□ 0.43
MCF2L-230ENST00000491028 SPATA21Q7Z572 469 aa17.72■□□□□ 0.43
MCF2L-230ENST00000491028 ZFAND4Q86XD8 727 aa17.72■□□□□ 0.43
MCF2L-230ENST00000491028 WDR36Q8NI36 951 aaKnown RBP17.72■□□□□ 0.43
MCF2L-230ENST00000491028 ZCCHC10Q8TBK6 192 aa17.72■□□□□ 0.43
MCF2L-230ENST00000491028 UTP15Q8TED0 518 aaKnown RBP17.72■□□□□ 0.43
MCF2L-230ENST00000491028 CHTF18Q8WVB6 975 aa17.72■□□□□ 0.43
MCF2L-230ENST00000491028 SMIM10Q96HG1 83 aa17.72■□□□□ 0.43
MCF2L-230ENST00000491028 KCNC2Q96PR1 638 aa17.72■□□□□ 0.43
MCF2L-230ENST00000491028 ELAC2Q9BQ52 826 aaKnown RBP17.72■□□□□ 0.43
MCF2L-230ENST00000491028 TBCDQ9BTW9 1192 aa17.72■□□□□ 0.43
MCF2L-230ENST00000491028 CCDC28BQ9BUN5 200 aa17.72■□□□□ 0.43
MCF2L-230ENST00000491028 TMEM120AQ9BXJ8 343 aa17.72■□□□□ 0.43
MCF2L-230ENST00000491028 MRPL1Q9BYD6 325 aaKnown RBP17.72■□□□□ 0.43
MCF2L-230ENST00000491028 WDR55Q9H6Y2 383 aaPredicted RBP17.72■□□□□ 0.43
MCF2L-230ENST00000491028 AKTIPQ9H8T0 292 aa17.72■□□□□ 0.43
MCF2L-230ENST00000491028 KCNK13Q9HB14 408 aa17.72■□□□□ 0.43
MCF2L-230ENST00000491028 STARD5Q9NSY2 213 aa17.72■□□□□ 0.43
MCF2L-230ENST00000491028 SIRT5Q9NXA8 310 aa17.72■□□□□ 0.43
MCF2L-230ENST00000491028 PTPRZ1P23471 2315 aaPredicted RBP17.72■□□□□ 0.43
MCF2L-230ENST00000491028 PTPRBP23467 1997 aa17.71■□□□□ 0.43
MCF2L-230ENST00000491028 CEP250Q9BV73 2442 aa17.71■□□□□ 0.43
MCF2L-230ENST00000491028 HYKKA2RU49 373 aa17.71■□□□□ 0.43
MCF2L-230ENST00000491028 PLD2O14939 933 aa17.71■□□□□ 0.43
MCF2L-230ENST00000491028 HYAL3O43820 417 aaPredicted RBP17.71■□□□□ 0.43
MCF2L-230ENST00000491028 SNX3O60493 162 aa17.71■□□□□ 0.43
MCF2L-230ENST00000491028 PEX11AO75192 247 aa17.71■□□□□ 0.43
MCF2L-230ENST00000491028 SH3BGRLO75368 114 aa17.71■□□□□ 0.43
MCF2L-230ENST00000491028 JMJD7P0C870 316 aa17.71■□□□□ 0.43
MCF2L-230ENST00000491028 ZNF888P0CJ79 500 aaPredicted RBP17.71■□□□□ 0.43
MCF2L-230ENST00000491028 CCL4P13236 92 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms