RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, human

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-223	ENST00000490833	SLC22A18	Q96BI1	424 aa		6.1	□□□□□ -1.43
FN1-223	ENST00000490833	MTFMT	Q96DP5	389 aa	Known RBP	6.1	□□□□□ -1.43
FN1-223	ENST00000490833	ZBED6CL	Q96FA7	236 aa	Predicted RBP	6.1	□□□□□ -1.43
FN1-223	ENST00000490833	PAWR	Q96IZ0	340 aa	Known RBP	6.1	□□□□□ -1.43
FN1-223	ENST00000490833	TSSK3	Q96PN8	268 aa		6.1	□□□□□ -1.43
FN1-223	ENST00000490833	PKP4	Q99569	1192 aa		6.1	□□□□□ -1.43
FN1-223	ENST00000490833	MAPKAP1	Q9BPZ7	522 aa		6.1	□□□□□ -1.43
FN1-223	ENST00000490833	WDR12	Q9GZL7	423 aa	Known RBP	6.1	□□□□□ -1.43
FN1-223	ENST00000490833	ROGDI	Q9GZN7	287 aa		6.1	□□□□□ -1.43
FN1-223	ENST00000490833	TOR3A	Q9H497	397 aa		6.1	□□□□□ -1.43
FN1-223	ENST00000490833	MVB12B	Q9H7P6	319 aa		6.1	□□□□□ -1.43
FN1-223	ENST00000490833	SIAE	Q9HAT2	523 aa		6.1	□□□□□ -1.43
FN1-223	ENST00000490833	SLC24A3	Q9HC58	644 aa		6.1	□□□□□ -1.43
FN1-223	ENST00000490833	HMG20A	Q9NP66	347 aa		6.1	□□□□□ -1.43
FN1-223	ENST00000490833	MIEF1	Q9NQG6	463 aa		6.1	□□□□□ -1.43
FN1-223	ENST00000490833	PHPT1	Q9NRX4	125 aa	Predicted RBP	6.1	□□□□□ -1.43
FN1-223	ENST00000490833	THSD1	Q9NS62	852 aa		6.1	□□□□□ -1.43
FN1-223	ENST00000490833	KRT84	Q9NSB2	600 aa		6.1	□□□□□ -1.43
FN1-223	ENST00000490833	ACSS1	Q9NUB1	689 aa	Predicted RBP	6.1	□□□□□ -1.43
FN1-223	ENST00000490833	TAS2R7	Q9NYW3	318 aa		6.1	□□□□□ -1.43
FN1-223	ENST00000490833	SLC25A37	Q9NYZ2	338 aa		6.1	□□□□□ -1.43
FN1-223	ENST00000490833	SH3BP4	Q9P0V3	963 aa		6.1	□□□□□ -1.43
FN1-223	ENST00000490833	SPAST	Q9UBP0	616 aa		6.1	□□□□□ -1.43
FN1-223	ENST00000490833	GIMAP2	Q9UG22	337 aa		6.1	□□□□□ -1.43
FN1-223	ENST00000490833	FZD4	Q9ULV1	537 aa		6.1	□□□□□ -1.43
FN1-223	ENST00000490833	ASB1	Q9Y576	335 aa		6.1	□□□□□ -1.43
FN1-223	ENST00000490833	COLEC10	Q9Y6Z7	277 aa		6.1	□□□□□ -1.43
FN1-223	ENST00000490833	A3GALT2	U3KPV4	340 aa		6.1	□□□□□ -1.43
FN1-223	ENST00000490833	ZNF106	Q9H2Y7	1883 aa	Known RBP	6.1	□□□□□ -1.43
FN1-223	ENST00000490833	LTBP2	Q14767	1821 aa		6.1	□□□□□ -1.43
FN1-223	ENST00000490833	PLXNA4	Q9HCM2	1894 aa		6.09	□□□□□ -1.43
FN1-223	ENST00000490833		A0A1W2PRB8	838 aa		6.09	□□□□□ -1.43
FN1-223	ENST00000490833	PIPSL	A2A3N6	862 aa		6.09	□□□□□ -1.43
FN1-223	ENST00000490833	GSAP	A4D1B5	854 aa		6.09	□□□□□ -1.43
FN1-223	ENST00000490833	SLC35F4	A4IF30	521 aa		6.09	□□□□□ -1.43
FN1-223	ENST00000490833	FAM149A	A5PLN7	773 aa		6.09	□□□□□ -1.43
FN1-223	ENST00000490833	TRIM43B	A6NCK2	446 aa		6.09	□□□□□ -1.43
FN1-223	ENST00000490833	TBC1D3B	A6NDS4	549 aa		6.09	□□□□□ -1.43
FN1-223	ENST00000490833	URAD	A6NGE7	173 aa		6.09	□□□□□ -1.43
FN1-223	ENST00000490833	OR2AG2	A6NM03	316 aa		6.09	□□□□□ -1.43
FN1-223	ENST00000490833	GABRR3	A8MPY1	467 aa		6.09	□□□□□ -1.43
FN1-223	ENST00000490833		A8MX80	341 aa		6.09	□□□□□ -1.43
FN1-223	ENST00000490833	TTC34	A8MYJ7	566 aa		6.09	□□□□□ -1.43
FN1-223	ENST00000490833	C5orf58	C9J3I9	102 aa		6.09	□□□□□ -1.43
FN1-223	ENST00000490833		M0R3G1	203 aa		6.09	□□□□□ -1.43
FN1-223	ENST00000490833	UPK1A	O00322	258 aa		6.09	□□□□□ -1.43
FN1-223	ENST00000490833	MMP20	O60882	483 aa		6.09	□□□□□ -1.43
FN1-223	ENST00000490833	SCN2B	O60939	215 aa		6.09	□□□□□ -1.43
FN1-223	ENST00000490833	CLEC3A	O75596	197 aa		6.09	□□□□□ -1.43
FN1-223	ENST00000490833	POP7	O75817	140 aa	Known RBP	6.09	□□□□□ -1.43
FN1-223	ENST00000490833	SEC24D	O94855	1032 aa	Predicted RBP	6.09	□□□□□ -1.43
FN1-223	ENST00000490833	ANGPTL1	O95841	491 aa		6.09	□□□□□ -1.43
FN1-223	ENST00000490833	PCNA	P12004	261 aa		6.09	□□□□□ -1.43
FN1-223	ENST00000490833	CD1E	P15812	388 aa		6.09	□□□□□ -1.43
FN1-223	ENST00000490833	HOXB9	P17482	250 aa	Predicted RBP	6.09	□□□□□ -1.43
FN1-223	ENST00000490833	RHCE	P18577	417 aa		6.09	□□□□□ -1.43
FN1-223	ENST00000490833	ZNF10	P21506	573 aa	Predicted RBP	6.09	□□□□□ -1.43
FN1-223	ENST00000490833	IDS	P22304	550 aa		6.09	□□□□□ -1.43
FN1-223	ENST00000490833	ITPKA	P23677	461 aa		6.09	□□□□□ -1.43
FN1-223	ENST00000490833	IMPA1	P29218	277 aa		6.09	□□□□□ -1.43
FN1-223	ENST00000490833	PTPN6	P29350	595 aa		6.09	□□□□□ -1.43
FN1-223	ENST00000490833	GK	P32189	559 aa		6.09	□□□□□ -1.43
FN1-223	ENST00000490833	CHI3L1	P36222	383 aa	Predicted RBP	6.09	□□□□□ -1.43
FN1-223	ENST00000490833	IFNGR2	P38484	337 aa		6.09	□□□□□ -1.43
FN1-223	ENST00000490833	TNFRSF4	P43489	277 aa		6.09	□□□□□ -1.43
FN1-223	ENST00000490833	HMGA2	P52926	109 aa		6.09	□□□□□ -1.43
FN1-223	ENST00000490833	ERVFC1	P60507	584 aa		6.09	□□□□□ -1.43
FN1-223	ENST00000490833	CDC42	P60953	191 aa		6.09	□□□□□ -1.43
FN1-223	ENST00000490833	ISL1	P61371	349 aa		6.09	□□□□□ -1.43
FN1-223	ENST00000490833	DMPK	Q09013	629 aa		6.09	□□□□□ -1.43
FN1-223	ENST00000490833	COX10	Q12887	443 aa		6.09	□□□□□ -1.43
FN1-223	ENST00000490833	SGCG	Q13326	291 aa		6.09	□□□□□ -1.43
FN1-223	ENST00000490833	PDE7A	Q13946	482 aa		6.09	□□□□□ -1.43
FN1-223	ENST00000490833	DGUOK	Q16854	277 aa		6.09	□□□□□ -1.43
FN1-223	ENST00000490833	LRRC26	Q2I0M4	334 aa		6.09	□□□□□ -1.43
FN1-223	ENST00000490833	EML3	Q32P44	896 aa		6.09	□□□□□ -1.43
FN1-223	ENST00000490833	FBXO48	Q5FWF7	155 aa		6.09	□□□□□ -1.43
FN1-223	ENST00000490833	TOR1AIP1	Q5JTV8	583 aa		6.09	□□□□□ -1.43
FN1-223	ENST00000490833	PRAMEF14	Q5SWL7	426 aa		6.09	□□□□□ -1.43
FN1-223	ENST00000490833	DEPDC1	Q5TB30	811 aa		6.09	□□□□□ -1.43
FN1-223	ENST00000490833	PRAMEF13	Q5VWM6	474 aa		6.09	□□□□□ -1.43
FN1-223	ENST00000490833	METRNL	Q641Q3	311 aa		6.09	□□□□□ -1.43
FN1-223	ENST00000490833	OR4F3	Q6IEY1	312 aa		6.09	□□□□□ -1.43
FN1-223	ENST00000490833	KIAA1161	Q6NSJ0	714 aa		6.09	□□□□□ -1.43
FN1-223	ENST00000490833	CES5A	Q6NT32	575 aa		6.09	□□□□□ -1.43
FN1-223	ENST00000490833	REEP3	Q6NUK4	255 aa		6.09	□□□□□ -1.43
FN1-223	ENST00000490833	TMEM214	Q6NUQ4	689 aa	Known RBP	6.09	□□□□□ -1.43
FN1-223	ENST00000490833	TUBA3E	Q6PEY2	450 aa		6.09	□□□□□ -1.43
FN1-223	ENST00000490833	SERPINA13P	Q6UXR4	307 aa		6.09	□□□□□ -1.43
FN1-223	ENST00000490833	PRSS48	Q7RTY5	328 aa		6.09	□□□□□ -1.43
FN1-223	ENST00000490833	PDZD3	Q86UT5	571 aa		6.09	□□□□□ -1.43
FN1-223	ENST00000490833	ANKRD13B	Q86YJ7	626 aa		6.09	□□□□□ -1.43
FN1-223	ENST00000490833	SLC44A2	Q8IWA5	706 aa	Predicted RBP	6.09	□□□□□ -1.43
FN1-223	ENST00000490833	ETFBKMT	Q8IXQ9	262 aa		6.09	□□□□□ -1.43
FN1-223	ENST00000490833	ZZZ3	Q8IYH5	903 aa		6.09	□□□□□ -1.43
FN1-223	ENST00000490833	PARP8	Q8N3A8	854 aa		6.09	□□□□□ -1.43
FN1-223	ENST00000490833	KRTCAP2	Q8N6L1	136 aa		6.09	□□□□□ -1.43
FN1-223	ENST00000490833	PNPLA1	Q8N8W4	532 aa		6.09	□□□□□ -1.43
FN1-223	ENST00000490833	DCBLD1	Q8N8Z6	715 aa		6.09	□□□□□ -1.43
FN1-223	ENST00000490833	TOR1AIP2	Q8NFQ8	470 aa		6.09	□□□□□ -1.43

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