RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 GPR173Q9NS66 373 aa3.36□□□□□ -1.87
CD46-216ENST00000490278 TMOD3Q9NYL9 352 aa3.36□□□□□ -1.87
CD46-216ENST00000490278 POMT2Q9UKY4 750 aa3.36□□□□□ -1.87
CD46-216ENST00000490278 SATB2Q9UPW6 733 aa3.36□□□□□ -1.87
CD46-216ENST00000490278 PFASO15067 1338 aa3.36□□□□□ -1.87
CD46-216ENST00000490278 ANKDD1BA6NHY2 528 aa3.35□□□□□ -1.87
CD46-216ENST00000490278 NKX6-3A6NJ46 265 aa3.35□□□□□ -1.87
CD46-216ENST00000490278 ZNF263O14978 683 aa3.35□□□□□ -1.87
CD46-216ENST00000490278 SURF4O15260 269 aa3.35□□□□□ -1.87
CD46-216ENST00000490278 NME6O75414 186 aaPredicted RBP3.35□□□□□ -1.87
CD46-216ENST00000490278 CRCPO75575 148 aa3.35□□□□□ -1.87
CD46-216ENST00000490278 DUS4LO95620 317 aaKnown RBP3.35□□□□□ -1.87
CD46-216ENST00000490278 CLK1P49759 484 aaKnown RBP3.35□□□□□ -1.87
CD46-216ENST00000490278 ARHGAP1Q07960 439 aa3.35□□□□□ -1.87
CD46-216ENST00000490278 GRB14Q14449 540 aa3.35□□□□□ -1.87
CD46-216ENST00000490278 MTHFSDQ2M296 383 aaKnown RBP3.35□□□□□ -1.87
CD46-216ENST00000490278 GLRA4Q5JXX5 417 aa3.35□□□□□ -1.87
CD46-216ENST00000490278 CES4AQ5XG92 561 aa3.35□□□□□ -1.87
CD46-216ENST00000490278 PM20D1Q6GTS8 502 aa3.35□□□□□ -1.87
CD46-216ENST00000490278 TRIM65Q6PJ69 517 aa3.35□□□□□ -1.87
CD46-216ENST00000490278 KIF6Q6ZMV9 814 aa3.35□□□□□ -1.87
CD46-216ENST00000490278 C15orf52Q6ZUT6 534 aaKnown RBP3.35□□□□□ -1.87
CD46-216ENST00000490278 AQP12AQ8IXF9 295 aa3.35□□□□□ -1.87
CD46-216ENST00000490278 CCDC170Q8IYT3 715 aa3.35□□□□□ -1.87
CD46-216ENST00000490278 TDHQ8IZJ6 230 aa3.35□□□□□ -1.87
CD46-216ENST00000490278 NUP93Q8N1F7 819 aa3.35□□□□□ -1.87
CD46-216ENST00000490278 CCDC185Q8N715 623 aa3.35□□□□□ -1.87
CD46-216ENST00000490278 NUP37Q8NFH4 326 aa3.35□□□□□ -1.87
CD46-216ENST00000490278 LINC00479Q96M42 142 aa3.35□□□□□ -1.87
CD46-216ENST00000490278 NSMCE3Q96MG7 304 aa3.35□□□□□ -1.87
CD46-216ENST00000490278 MCRIP2Q9BUT9 160 aaKnown RBP3.35□□□□□ -1.87
CD46-216ENST00000490278 FGFBP2Q9BYJ0 223 aa3.35□□□□□ -1.87
CD46-216ENST00000490278 WWTR1Q9GZV5 400 aa3.35□□□□□ -1.87
CD46-216ENST00000490278 CNIH4Q9P003 139 aa3.35□□□□□ -1.87
CD46-216ENST00000490278 LNPEPQ9UIQ6 1025 aa3.35□□□□□ -1.87
CD46-216ENST00000490278 ITM2BQ9Y287 266 aa3.35□□□□□ -1.87
CD46-216ENST00000490278 ACEP12821 1306 aa3.35□□□□□ -1.87
CD46-216ENST00000490278 SPATA31D1Q6ZQQ2 1576 aa3.34□□□□□ -1.87
CD46-216ENST00000490278 hCG_38984A0A1B0GV85 526 aa3.34□□□□□ -1.87
CD46-216ENST00000490278 C13orf42A0A1B0GVH6 325 aa3.34□□□□□ -1.87
CD46-216ENST00000490278 C2orf92A0A1B0GVN3 265 aa3.34□□□□□ -1.87
CD46-216ENST00000490278 NDUFAF8A1L188 74 aa3.34□□□□□ -1.87
CD46-216ENST00000490278 KPNA7A9QM74 516 aa3.34□□□□□ -1.87
CD46-216ENST00000490278 CCER2I3L3R5 266 aa3.34□□□□□ -1.87
CD46-216ENST00000490278 RTCAO00442 366 aaKnown RBP3.34□□□□□ -1.87
CD46-216ENST00000490278 MAGEB2O15479 319 aa3.34□□□□□ -1.87
CD46-216ENST00000490278 ATP9AO75110 1047 aa3.34□□□□□ -1.87
CD46-216ENST00000490278 GLCEO94923 617 aa3.34□□□□□ -1.87
CD46-216ENST00000490278 ZSCAN5DPP0CG00 497 aa3.34□□□□□ -1.87
CD46-216ENST00000490278 MYOGP15173 224 aa3.34□□□□□ -1.87
CD46-216ENST00000490278 CTNNA2P26232 953 aa3.34□□□□□ -1.87
CD46-216ENST00000490278 SRD5A2P31213 254 aa3.34□□□□□ -1.87
CD46-216ENST00000490278 LUMP51884 338 aaPredicted RBP3.34□□□□□ -1.87
CD46-216ENST00000490278 GSCP56915 257 aaPredicted RBP3.34□□□□□ -1.87
CD46-216ENST00000490278 STX1BP61266 288 aa3.34□□□□□ -1.87
CD46-216ENST00000490278 SMU1Q2TAY7 513 aa3.34□□□□□ -1.87
CD46-216ENST00000490278 C14orf177Q52M58 125 aa3.34□□□□□ -1.87
CD46-216ENST00000490278 LRRC38Q5VT99 294 aa3.34□□□□□ -1.87
CD46-216ENST00000490278 IYDQ6PHW0 289 aa3.34□□□□□ -1.87
CD46-216ENST00000490278 FRRS1Q6ZNA5 592 aa3.34□□□□□ -1.87
CD46-216ENST00000490278 TRMT11Q7Z4G4 463 aaKnown RBP3.34□□□□□ -1.87
CD46-216ENST00000490278 CCDC91Q7Z6B0 441 aa3.34□□□□□ -1.87
CD46-216ENST00000490278 CCDC83Q8IWF9 413 aa3.34□□□□□ -1.87
CD46-216ENST00000490278 ZC3H3Q8IXZ2 948 aaKnown RBP3.34□□□□□ -1.87
CD46-216ENST00000490278 KLHDC8AQ8IYD2 350 aa3.34□□□□□ -1.87
CD46-216ENST00000490278 SLC22A15Q8IZD6 547 aa3.34□□□□□ -1.87
CD46-216ENST00000490278 TEX26Q8N6G2 289 aa3.34□□□□□ -1.87
CD46-216ENST00000490278 TMEM99Q8N816 258 aa3.34□□□□□ -1.87
CD46-216ENST00000490278 WBP2Q969T9 261 aa3.34□□□□□ -1.87
CD46-216ENST00000490278 CDKN2AIPNLQ96HQ2 116 aa3.34□□□□□ -1.87
CD46-216ENST00000490278 LURAP1Q96LR2 239 aa3.34□□□□□ -1.87
CD46-216ENST00000490278 RASL10BQ96S79 203 aa3.34□□□□□ -1.87
CD46-216ENST00000490278 OVOL2Q9BRP0 275 aa3.34□□□□□ -1.87
CD46-216ENST00000490278 SYT11Q9BT88 431 aa3.34□□□□□ -1.87
CD46-216ENST00000490278 SLC39A8Q9C0K1 460 aa3.34□□□□□ -1.87
CD46-216ENST00000490278 CUEDC2Q9H467 287 aa3.34□□□□□ -1.87
CD46-216ENST00000490278 IL1RAPL2Q9NP60 686 aa3.34□□□□□ -1.87
CD46-216ENST00000490278 B3GAT2Q9NPZ5 323 aa3.34□□□□□ -1.87
CD46-216ENST00000490278 MRPL17Q9NRX2 175 aaKnown RBP3.34□□□□□ -1.87
CD46-216ENST00000490278 TEX10Q9NXF1 929 aaPredicted RBP3.34□□□□□ -1.87
CD46-216ENST00000490278 WIPI2Q9Y4P8 454 aa3.34□□□□□ -1.87
CD46-216ENST00000490278 RNF123Q5XPI4 1314 aa3.34□□□□□ -1.87
CD46-216ENST00000490278 LRRD1A4D1F6 860 aa3.33□□□□□ -1.88
CD46-216ENST00000490278 FAM149AA5PLN7 773 aa3.33□□□□□ -1.88
CD46-216ENST00000490278 MPTX1A8MV57 137 aa3.33□□□□□ -1.88
CD46-216ENST00000490278 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.33□□□□□ -1.88
CD46-216ENST00000490278 NPIPB9F8W1W9 429 aa3.33□□□□□ -1.88
CD46-216ENST00000490278 TTI1O43156 1089 aa3.33□□□□□ -1.88
CD46-216ENST00000490278 FMO6PO60774 539 aa3.33□□□□□ -1.88
CD46-216ENST00000490278 GRAP2O75791 330 aa3.33□□□□□ -1.88
CD46-216ENST00000490278 TRIM49P0CI25 452 aa3.33□□□□□ -1.88
CD46-216ENST00000490278 TRIM49CP0CI26 452 aa3.33□□□□□ -1.88
CD46-216ENST00000490278 SLC1A3P43003 542 aa3.33□□□□□ -1.88
CD46-216ENST00000490278 HILS1P60008 231 aa3.33□□□□□ -1.88
CD46-216ENST00000490278 FKBP1BP68106 108 aa3.33□□□□□ -1.88
CD46-216ENST00000490278 DHODHQ02127 395 aa3.33□□□□□ -1.88
CD46-216ENST00000490278 RCN2Q14257 317 aa3.33□□□□□ -1.88
CD46-216ENST00000490278 NECTIN1Q15223 517 aa3.33□□□□□ -1.88
CD46-216ENST00000490278 ZNF674Q2M3X9 581 aa3.33□□□□□ -1.88
CD46-216ENST00000490278 FUT11Q495W5 492 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms