RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 PLCL2Q9UPR0 1127 aa4.16□□□□□ -1.74
CCDC39-206ENST00000489868 RUVBL2Q9Y230 463 aaKnown RBP4.16□□□□□ -1.74
CCDC39-206ENST00000489868 IGLV4-3A0A075B6K6 122 aa4.15□□□□□ -1.75
CCDC39-206ENST00000489868 hCG_38984A0A1B0GV85 526 aa4.15□□□□□ -1.75
CCDC39-206ENST00000489868 TSPY2A6NKD2 308 aa4.15□□□□□ -1.75
CCDC39-206ENST00000489868 PGLSO95336 258 aa4.15□□□□□ -1.75
CCDC39-206ENST00000489868 POP4O95707 220 aaKnown RBP4.15□□□□□ -1.75
CCDC39-206ENST00000489868 HPRP00739 348 aa4.15□□□□□ -1.75
CCDC39-206ENST00000489868 RPLP0P05388 317 aaKnown RBP4.15□□□□□ -1.75
CCDC39-206ENST00000489868 ZFYP08048 801 aaPredicted RBP4.15□□□□□ -1.75
CCDC39-206ENST00000489868 IL4RP24394 825 aa4.15□□□□□ -1.75
CCDC39-206ENST00000489868 OXTRP30559 389 aa4.15□□□□□ -1.75
CCDC39-206ENST00000489868 PGFP49763 221 aa4.15□□□□□ -1.75
CCDC39-206ENST00000489868 NDST2P52849 883 aa4.15□□□□□ -1.75
CCDC39-206ENST00000489868 FAM46CQ5VWP2 391 aa4.15□□□□□ -1.75
CCDC39-206ENST00000489868 SHEQ5VZ18 495 aa4.15□□□□□ -1.75
CCDC39-206ENST00000489868 SPAG16Q8N0X2 631 aa4.15□□□□□ -1.75
CCDC39-206ENST00000489868 TEX26Q8N6G2 289 aa4.15□□□□□ -1.75
CCDC39-206ENST00000489868 NPRL2Q8WTW4 380 aa4.15□□□□□ -1.75
CCDC39-206ENST00000489868 RIT1Q92963 219 aa4.15□□□□□ -1.75
CCDC39-206ENST00000489868 LURAP1Q96LR2 239 aa4.15□□□□□ -1.75
CCDC39-206ENST00000489868 ZNF597Q96LX8 424 aa4.15□□□□□ -1.75
CCDC39-206ENST00000489868 INPP5KQ9BT40 448 aa4.15□□□□□ -1.75
CCDC39-206ENST00000489868 MRPS18CQ9Y3D5 142 aaKnown RBP4.15□□□□□ -1.75
CCDC39-206ENST00000489868 HTR3EA5X5Y0 456 aa4.14□□□□□ -1.75
CCDC39-206ENST00000489868 SHISA9B4DS77 424 aa4.14□□□□□ -1.75
CCDC39-206ENST00000489868 RNF103O00237 685 aa4.14□□□□□ -1.75
CCDC39-206ENST00000489868 SIGLEC5O15389 551 aa4.14□□□□□ -1.75
CCDC39-206ENST00000489868 HOXD4P09016 255 aaPredicted RBP4.14□□□□□ -1.75
CCDC39-206ENST00000489868 QDPRP09417 244 aa4.14□□□□□ -1.75
CCDC39-206ENST00000489868 FOLR2P14207 255 aa4.14□□□□□ -1.75
CCDC39-206ENST00000489868 HOXC13P31276 330 aa4.14□□□□□ -1.75
CCDC39-206ENST00000489868 GPR183P32249 361 aa4.14□□□□□ -1.75
CCDC39-206ENST00000489868 CAPGP40121 348 aa4.14□□□□□ -1.75
CCDC39-206ENST00000489868 OR3A1P47881 315 aa4.14□□□□□ -1.75
CCDC39-206ENST00000489868 CAPZA1P52907 286 aa4.14□□□□□ -1.75
CCDC39-206ENST00000489868 LIMK2P53671 638 aa4.14□□□□□ -1.75
CCDC39-206ENST00000489868 MS4A18Q3C1V0 323 aa4.14□□□□□ -1.75
CCDC39-206ENST00000489868 KLHL10Q6JEL2 608 aa4.14□□□□□ -1.75
CCDC39-206ENST00000489868 CAVIN1Q6NZI2 390 aaKnown RBP4.14□□□□□ -1.75
CCDC39-206ENST00000489868 SPATA19Q7Z5L4 167 aa4.14□□□□□ -1.75
CCDC39-206ENST00000489868 ERC1Q8IUD2 1116 aa4.14□□□□□ -1.75
CCDC39-206ENST00000489868 OR9Q2Q8NGE9 314 aa4.14□□□□□ -1.75
CCDC39-206ENST00000489868 OR2L2Q8NH16 312 aa4.14□□□□□ -1.75
CCDC39-206ENST00000489868 CD99L2Q8TCZ2 262 aa4.14□□□□□ -1.75
CCDC39-206ENST00000489868 SLC26A7Q8TE54 656 aa4.14□□□□□ -1.75
CCDC39-206ENST00000489868 SAP25Q8TEE9 199 aa4.14□□□□□ -1.75
CCDC39-206ENST00000489868 C11orf52Q96A22 123 aa4.14□□□□□ -1.75
CCDC39-206ENST00000489868 RAB3IPQ96QF0 476 aaPredicted RBP4.14□□□□□ -1.75
CCDC39-206ENST00000489868 CCDC28BQ9BUN5 200 aa4.14□□□□□ -1.75
CCDC39-206ENST00000489868 FNDC4Q9H6D8 234 aaPredicted RBP4.14□□□□□ -1.75
CCDC39-206ENST00000489868 C10orf88Q9H8K7 445 aa4.14□□□□□ -1.75
CCDC39-206ENST00000489868 GPN1Q9HCN4 374 aaPredicted RBP4.14□□□□□ -1.75
CCDC39-206ENST00000489868 SLC12A6Q9UHW9 1150 aa4.14□□□□□ -1.75
CCDC39-206ENST00000489868 NOCTQ9UK39 431 aaKnown RBP4.14□□□□□ -1.75
CCDC39-206ENST00000489868 PGRMC2O15173 223 aa4.13□□□□□ -1.75
CCDC39-206ENST00000489868 SELENOFO60613 162 aa4.13□□□□□ -1.75
CCDC39-206ENST00000489868 SP9P0CG40 484 aa4.13□□□□□ -1.75
CCDC39-206ENST00000489868 GOT1P17174 413 aa4.13□□□□□ -1.75
CCDC39-206ENST00000489868 BCL3P20749 454 aa4.13□□□□□ -1.75
CCDC39-206ENST00000489868 ATP4BP51164 291 aa4.13□□□□□ -1.75
CCDC39-206ENST00000489868 FKBP3Q00688 224 aaKnown RBP4.13□□□□□ -1.75
CCDC39-206ENST00000489868 KIAA0141Q14154 515 aaPredicted RBP4.13□□□□□ -1.75
CCDC39-206ENST00000489868 TIPARPQ7Z3E1 657 aaKnown RBP4.13□□□□□ -1.75
CCDC39-206ENST00000489868 TRMT11Q7Z4G4 463 aaKnown RBP4.13□□□□□ -1.75
CCDC39-206ENST00000489868 SPATA21Q7Z572 469 aa4.13□□□□□ -1.75
CCDC39-206ENST00000489868 CREBRFQ8IUR6 639 aa4.13□□□□□ -1.75
CCDC39-206ENST00000489868 TIGD4Q8IY51 512 aa4.13□□□□□ -1.75
CCDC39-206ENST00000489868 TDHQ8IZJ6 230 aa4.13□□□□□ -1.75
CCDC39-206ENST00000489868 NME8Q8N427 588 aa4.13□□□□□ -1.75
CCDC39-206ENST00000489868 AK8Q96MA6 479 aa4.13□□□□□ -1.75
CCDC39-206ENST00000489868 IL12RB2Q99665 862 aa4.13□□□□□ -1.75
CCDC39-206ENST00000489868 PAPOLGQ9BWT3 736 aaKnown RBP4.13□□□□□ -1.75
CCDC39-206ENST00000489868 HEXA-AS1Q9H8Q6 139 aa4.13□□□□□ -1.75
CCDC39-206ENST00000489868 EXOC1Q9NV70 894 aa4.13□□□□□ -1.75
CCDC39-206ENST00000489868 KLK11Q9UBX7 282 aa4.13□□□□□ -1.75
CCDC39-206ENST00000489868 SATB2Q9UPW6 733 aa4.13□□□□□ -1.75
CCDC39-206ENST00000489868 NKX6-3A6NJ46 265 aa4.12□□□□□ -1.75
CCDC39-206ENST00000489868 A8MU76 341 aa4.12□□□□□ -1.75
CCDC39-206ENST00000489868 LMO7DNF2Z398 122 aa4.12□□□□□ -1.75
CCDC39-206ENST00000489868 NPIPA3F8WFD2 350 aa4.12□□□□□ -1.75
CCDC39-206ENST00000489868 MOCS2O96007 188 aaPredicted RBP4.12□□□□□ -1.75
CCDC39-206ENST00000489868 PCP11498 1178 aaKnown RBP4.12□□□□□ -1.75
CCDC39-206ENST00000489868 IFNAR1P17181 557 aa4.12□□□□□ -1.75
CCDC39-206ENST00000489868 GP5P40197 560 aa4.12□□□□□ -1.75
CCDC39-206ENST00000489868 CSRP3P50461 194 aa4.12□□□□□ -1.75
CCDC39-206ENST00000489868 PRELPP51888 382 aa4.12□□□□□ -1.75
CCDC39-206ENST00000489868 NDUFV3P56181 108 aaKnown RBP4.12□□□□□ -1.75
CCDC39-206ENST00000489868 ABCE1P61221 599 aaKnown RBP4.12□□□□□ -1.75
CCDC39-206ENST00000489868 ZFP36L1Q07352 338 aaKnown RBP4.12□□□□□ -1.75
CCDC39-206ENST00000489868 TFCP2Q12800 502 aa4.12□□□□□ -1.75
CCDC39-206ENST00000489868 UPP1Q16831 310 aa4.12□□□□□ -1.75
CCDC39-206ENST00000489868 CDO1Q16878 200 aa4.12□□□□□ -1.75
CCDC39-206ENST00000489868 LRRC37A5PQ49AS3 106 aa4.12□□□□□ -1.75
CCDC39-206ENST00000489868 ZNF841Q6ZN19 808 aa4.12□□□□□ -1.75
CCDC39-206ENST00000489868 OR5M9Q8NGP3 310 aa4.12□□□□□ -1.75
CCDC39-206ENST00000489868 FERMT1Q9BQL6 677 aa4.12□□□□□ -1.75
CCDC39-206ENST00000489868 CHCHD5Q9BSY4 110 aa4.12□□□□□ -1.75
CCDC39-206ENST00000489868 UBQLN3Q9H347 655 aa4.12□□□□□ -1.75
CCDC39-206ENST00000489868 PFDN4Q9NQP4 134 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms