RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 STK16O75716 305 aa10.06□□□□□ -0.8
SCAMP4-208ENST00000489554 KLF7O75840 302 aaPredicted RBP10.06□□□□□ -0.8
SCAMP4-208ENST00000489554 DNAJB5O75953 348 aa10.06□□□□□ -0.8
SCAMP4-208ENST00000489554 CCNDBP1O95273 360 aa10.06□□□□□ -0.8
SCAMP4-208ENST00000489554 ONECUT2O95948 504 aa10.06□□□□□ -0.8
SCAMP4-208ENST00000489554 IGHEP01854 428 aa10.06□□□□□ -0.8
SCAMP4-208ENST00000489554 S100BP04271 92 aaPredicted RBP10.06□□□□□ -0.8
SCAMP4-208ENST00000489554 CTSBP07858 339 aa10.06□□□□□ -0.8
SCAMP4-208ENST00000489554 NEFHP12036 1026 aa10.06□□□□□ -0.8
SCAMP4-208ENST00000489554 NPPBP16860 134 aa10.06□□□□□ -0.8
SCAMP4-208ENST00000489554 TSPAN8P19075 237 aa10.06□□□□□ -0.8
SCAMP4-208ENST00000489554 DRD4P21917 467 aa10.06□□□□□ -0.8
SCAMP4-208ENST00000489554 ALAS2P22557 587 aa10.06□□□□□ -0.8
SCAMP4-208ENST00000489554 FOLR3P41439 243 aa10.06□□□□□ -0.8
SCAMP4-208ENST00000489554 CDH13P55290 713 aa10.06□□□□□ -0.8
SCAMP4-208ENST00000489554 PCDH1Q08174 1060 aa10.06□□□□□ -0.8
SCAMP4-208ENST00000489554 TRAF3Q13114 568 aa10.06□□□□□ -0.8
SCAMP4-208ENST00000489554 RCN2Q14257 317 aa10.06□□□□□ -0.8
SCAMP4-208ENST00000489554 SSPNQ14714 243 aa10.06□□□□□ -0.8
SCAMP4-208ENST00000489554 FAM214AQ32MH5 1076 aa10.06□□□□□ -0.8
SCAMP4-208ENST00000489554 CPZQ66K79 652 aa10.06□□□□□ -0.8
SCAMP4-208ENST00000489554 MRPL14Q6P1L8 145 aaKnown RBP10.06□□□□□ -0.8
SCAMP4-208ENST00000489554 CCDC121Q6ZUS5 278 aa10.06□□□□□ -0.8
SCAMP4-208ENST00000489554 TTLL10Q6ZVT0 673 aa10.06□□□□□ -0.8
SCAMP4-208ENST00000489554 ASB18Q6ZVZ8 466 aa10.06□□□□□ -0.8
SCAMP4-208ENST00000489554 RNF44Q7L0R7 432 aa10.06□□□□□ -0.8
SCAMP4-208ENST00000489554 LRRC70Q7Z2Q7 622 aa10.06□□□□□ -0.8
SCAMP4-208ENST00000489554 PIGWQ7Z7B1 504 aa10.06□□□□□ -0.8
SCAMP4-208ENST00000489554 THOC6Q86W42 341 aaKnown RBP10.06□□□□□ -0.8
SCAMP4-208ENST00000489554 OR2Y1Q8NGV0 311 aa10.06□□□□□ -0.8
SCAMP4-208ENST00000489554 ATL1Q8WXF7 558 aa10.06□□□□□ -0.8
SCAMP4-208ENST00000489554 FKBP10Q96AY3 582 aa10.06□□□□□ -0.8
SCAMP4-208ENST00000489554 SEC16BQ96JE7 1060 aa10.06□□□□□ -0.8
SCAMP4-208ENST00000489554 SLC25A23Q9BV35 468 aa10.06□□□□□ -0.8
SCAMP4-208ENST00000489554 TRIM55Q9BYV6 548 aa10.06□□□□□ -0.8
SCAMP4-208ENST00000489554 TRIM4Q9C037 500 aa10.06□□□□□ -0.8
SCAMP4-208ENST00000489554 DRC3Q9H069 523 aa10.06□□□□□ -0.8
SCAMP4-208ENST00000489554 MANSC1Q9H8J5 431 aa10.06□□□□□ -0.8
SCAMP4-208ENST00000489554 MRPS30Q9NP92 439 aaKnown RBP10.06□□□□□ -0.8
SCAMP4-208ENST00000489554 SLCO1B3Q9NPD5 702 aa10.06□□□□□ -0.8
SCAMP4-208ENST00000489554 CUTCQ9NTM9 273 aa10.06□□□□□ -0.8
SCAMP4-208ENST00000489554 HAO1Q9UJM8 370 aa10.06□□□□□ -0.8
SCAMP4-208ENST00000489554 SLC22A14Q9Y267 594 aa10.06□□□□□ -0.8
SCAMP4-208ENST00000489554 PTRH2Q9Y3E5 179 aaKnown RBP10.06□□□□□ -0.8
SCAMP4-208ENST00000489554 PCM1Q15154 2024 aa10.06□□□□□ -0.8
SCAMP4-208ENST00000489554 KCNE1BA0A087WTH5 132 aa10.05□□□□□ -0.8
SCAMP4-208ENST00000489554 IGKV1-8A0A0C4DH67 115 aa10.05□□□□□ -0.8
SCAMP4-208ENST00000489554 TMEM114B3SHH9 223 aa10.05□□□□□ -0.8
SCAMP4-208ENST00000489554 TCP11X1B4DZS4 312 aa10.05□□□□□ -0.8
SCAMP4-208ENST00000489554 PEX12O00623 359 aa10.05□□□□□ -0.8
SCAMP4-208ENST00000489554 CCNT2O60583 730 aaKnown RBP10.05□□□□□ -0.8
SCAMP4-208ENST00000489554 H2AFYO75367 372 aaKnown RBP10.05□□□□□ -0.8
SCAMP4-208ENST00000489554 CEACAM4O75871 244 aa10.05□□□□□ -0.8
SCAMP4-208ENST00000489554 SUPT7LO94864 414 aa10.05□□□□□ -0.8
SCAMP4-208ENST00000489554 WDR47O94967 919 aa10.05□□□□□ -0.8
SCAMP4-208ENST00000489554 ALBP02768 609 aa10.05□□□□□ -0.8
SCAMP4-208ENST00000489554 CD22P20273 847 aa10.05□□□□□ -0.8
SCAMP4-208ENST00000489554 GRK2P25098 689 aa10.05□□□□□ -0.8
SCAMP4-208ENST00000489554 OTX2P32243 289 aa10.05□□□□□ -0.8
SCAMP4-208ENST00000489554 CCL11P51671 97 aa10.05□□□□□ -0.8
SCAMP4-208ENST00000489554 PGDP52209 483 aa10.05□□□□□ -0.8
SCAMP4-208ENST00000489554 VSX2P58304 361 aaPredicted RBP10.05□□□□□ -0.8
SCAMP4-208ENST00000489554 ABCE1P61221 599 aaKnown RBP10.05□□□□□ -0.8
SCAMP4-208ENST00000489554 ABATP80404 500 aa10.05□□□□□ -0.8
SCAMP4-208ENST00000489554 KCNC4Q03721 635 aa10.05□□□□□ -0.8
SCAMP4-208ENST00000489554 TLE1Q04724 770 aa10.05□□□□□ -0.8
SCAMP4-208ENST00000489554 CLCQ05315 142 aa10.05□□□□□ -0.8
SCAMP4-208ENST00000489554 PRDX1Q06830 199 aaKnown RBP10.05□□□□□ -0.8
SCAMP4-208ENST00000489554 CHAF1BQ13112 559 aa10.05□□□□□ -0.8
SCAMP4-208ENST00000489554 TSTA3Q13630 321 aaPredicted RBP10.05□□□□□ -0.8
SCAMP4-208ENST00000489554 GTF2H2Q13888 395 aa10.05□□□□□ -0.8
SCAMP4-208ENST00000489554 ARL13AQ5H913 290 aaPredicted RBP10.05□□□□□ -0.8
SCAMP4-208ENST00000489554 WASHC2DQ5SRD0 308 aa10.05□□□□□ -0.8
SCAMP4-208ENST00000489554 FAM69BQ5VUD6 431 aa10.05□□□□□ -0.8
SCAMP4-208ENST00000489554 ATG16L1Q676U5 607 aa10.05□□□□□ -0.8
SCAMP4-208ENST00000489554 CGB2Q6NT52 195 aa10.05□□□□□ -0.8
SCAMP4-208ENST00000489554 GTF2H2CQ6P1K8 395 aa10.05□□□□□ -0.8
SCAMP4-208ENST00000489554 LCTLQ6UWM7 567 aa10.05□□□□□ -0.8
SCAMP4-208ENST00000489554 MRGPREQ86SM8 312 aa10.05□□□□□ -0.8
SCAMP4-208ENST00000489554 TEX9Q8N6V9 391 aa10.05□□□□□ -0.8
SCAMP4-208ENST00000489554 CCNYL1Q8N7R7 359 aa10.05□□□□□ -0.8
SCAMP4-208ENST00000489554 TEX19Q8NA77 164 aa10.05□□□□□ -0.8
SCAMP4-208ENST00000489554 OR52B6Q8NGF0 335 aa10.05□□□□□ -0.8
SCAMP4-208ENST00000489554 AGAP11Q8TF27 550 aa10.05□□□□□ -0.8
SCAMP4-208ENST00000489554 NACC2Q96BF6 587 aa10.05□□□□□ -0.8
SCAMP4-208ENST00000489554 CNDP1Q96KN2 507 aa10.05□□□□□ -0.8
SCAMP4-208ENST00000489554 FER1L6-AS2Q96M78 137 aa10.05□□□□□ -0.8
SCAMP4-208ENST00000489554 ZFYVE21Q9BQ24 234 aa10.05□□□□□ -0.8
SCAMP4-208ENST00000489554 DPH7Q9BTV6 452 aa10.05□□□□□ -0.8
SCAMP4-208ENST00000489554 ACAT2Q9BWD1 397 aa10.05□□□□□ -0.8
SCAMP4-208ENST00000489554 CLMPQ9H6B4 373 aa10.05□□□□□ -0.8
SCAMP4-208ENST00000489554 WDR54Q9H977 334 aa10.05□□□□□ -0.8
SCAMP4-208ENST00000489554 DNAJC11Q9NVH1 559 aa10.05□□□□□ -0.8
SCAMP4-208ENST00000489554 KLHL14Q9P2G3 628 aa10.05□□□□□ -0.8
SCAMP4-208ENST00000489554 OPTCQ9UBM4 332 aa10.05□□□□□ -0.8
SCAMP4-208ENST00000489554 NXT1Q9UKK6 140 aaKnown RBP10.05□□□□□ -0.8
SCAMP4-208ENST00000489554 PCDHGB7Q9Y5F8 929 aa10.05□□□□□ -0.8
SCAMP4-208ENST00000489554 TNPO3Q9Y5L0 923 aaKnown RBP10.05□□□□□ -0.8
SCAMP4-208ENST00000489554 SPTBP11277 2137 aa10.04□□□□□ -0.8
SCAMP4-208ENST00000489554 HEATR5BQ9P2D3 2071 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms