RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 FFAR3O14843 346 aa16.42■□□□□ 0.22
MDC1-206ENST00000489540 GPR42O15529 346 aa16.42■□□□□ 0.22
MDC1-206ENST00000489540 CEACAM4O75871 244 aa16.42■□□□□ 0.22
MDC1-206ENST00000489540 C1QL1O75973 258 aa16.42■□□□□ 0.22
MDC1-206ENST00000489540 SHBGP04278 402 aa16.42■□□□□ 0.22
MDC1-206ENST00000489540 CYC1P08574 325 aa16.42■□□□□ 0.22
MDC1-206ENST00000489540 ZNF888P0CJ79 500 aaPredicted RBP16.42■□□□□ 0.22
MDC1-206ENST00000489540 SMIM10L1P0DMW3 83 aa16.42■□□□□ 0.22
MDC1-206ENST00000489540 HYAL2Q12891 473 aa16.42■□□□□ 0.22
MDC1-206ENST00000489540 RASA2Q15283 850 aa16.42■□□□□ 0.22
MDC1-206ENST00000489540 DEFB134Q4QY38 66 aa16.42■□□□□ 0.22
MDC1-206ENST00000489540 LACTB2Q53H82 288 aaPredicted RBP16.42■□□□□ 0.22
MDC1-206ENST00000489540 KIRREL2Q6UWL6 708 aa16.42■□□□□ 0.22
MDC1-206ENST00000489540 TDRPQ86YL5 185 aa16.42■□□□□ 0.22
MDC1-206ENST00000489540 ZC3H7AQ8IWR0 971 aaKnown RBP16.42■□□□□ 0.22
MDC1-206ENST00000489540 PTGR2Q8N8N7 351 aaPredicted RBP16.42■□□□□ 0.22
MDC1-206ENST00000489540 SMIM10Q96HG1 83 aa16.42■□□□□ 0.22
MDC1-206ENST00000489540 SLC25A23Q9BV35 468 aa16.42■□□□□ 0.22
MDC1-206ENST00000489540 HCN3Q9P1Z3 774 aa16.42■□□□□ 0.22
MDC1-206ENST00000489540 TBK1Q9UHD2 729 aa16.42■□□□□ 0.22
MDC1-206ENST00000489540 LRIT2A6NDA9 550 aa16.41■□□□□ 0.22
MDC1-206ENST00000489540 STX16-NPEPL1H3BU86 382 aa16.41■□□□□ 0.22
MDC1-206ENST00000489540 STX16O14662 325 aa16.41■□□□□ 0.22
MDC1-206ENST00000489540 KLHL41O60662 606 aa16.41■□□□□ 0.22
MDC1-206ENST00000489540 RDH16O75452 317 aa16.41■□□□□ 0.22
MDC1-206ENST00000489540 CD22P20273 847 aa16.41■□□□□ 0.22
MDC1-206ENST00000489540 HSD17B3P37058 310 aa16.41■□□□□ 0.22
MDC1-206ENST00000489540 HNF4AP41235 474 aa16.41■□□□□ 0.22
MDC1-206ENST00000489540 XCR1P46094 333 aa16.41■□□□□ 0.22
MDC1-206ENST00000489540 NFATC3Q12968 1075 aa16.41■□□□□ 0.22
MDC1-206ENST00000489540 TOR1AIP1Q5JTV8 583 aa16.41■□□□□ 0.22
MDC1-206ENST00000489540 MED27Q6P2C8 311 aa16.41■□□□□ 0.22
MDC1-206ENST00000489540 EMBQ6PCB8 327 aa16.41■□□□□ 0.22
MDC1-206ENST00000489540 CCT6BQ92526 530 aa16.41■□□□□ 0.22
MDC1-206ENST00000489540 PHF21BQ96EK2 531 aa16.41■□□□□ 0.22
MDC1-206ENST00000489540 KLHL31Q9H511 634 aa16.41■□□□□ 0.22
MDC1-206ENST00000489540 ZNF71Q9NQZ8 489 aaPredicted RBP16.41■□□□□ 0.22
MDC1-206ENST00000489540 ADGRE2Q9UHX3 823 aa16.41■□□□□ 0.22
MDC1-206ENST00000489540 FBXL4Q9UKA2 621 aa16.41■□□□□ 0.22
MDC1-206ENST00000489540 MKL2Q9ULH7 1088 aa16.41■□□□□ 0.22
MDC1-206ENST00000489540 A0A088AWK7 358 aa16.4■□□□□ 0.22
MDC1-206ENST00000489540 B8ZZF3 427 aa16.4■□□□□ 0.22
MDC1-206ENST00000489540 E2F3O00716 465 aa16.4■□□□□ 0.22
MDC1-206ENST00000489540 UGDHO60701 494 aa16.4■□□□□ 0.22
MDC1-206ENST00000489540 GSTA1P08263 222 aa16.4■□□□□ 0.22
MDC1-206ENST00000489540 ACPPP15309 386 aa16.4■□□□□ 0.22
MDC1-206ENST00000489540 ZNF10P21506 573 aaPredicted RBP16.4■□□□□ 0.22
MDC1-206ENST00000489540 SERPINB1P30740 379 aa16.4■□□□□ 0.22
MDC1-206ENST00000489540 SOX8P57073 446 aa16.4■□□□□ 0.22
MDC1-206ENST00000489540 RAB8AP61006 207 aa16.4■□□□□ 0.22
MDC1-206ENST00000489540 AIMP2Q13155 320 aaKnown RBP16.4■□□□□ 0.22
MDC1-206ENST00000489540 GTF2H2Q13888 395 aa16.4■□□□□ 0.22
MDC1-206ENST00000489540 TUBB8Q3ZCM7 444 aa16.4■□□□□ 0.22
MDC1-206ENST00000489540 LIPJQ5W064 366 aa16.4■□□□□ 0.22
MDC1-206ENST00000489540 GRHL2Q6ISB3 625 aa16.4■□□□□ 0.22
MDC1-206ENST00000489540 GTF2H2CQ6P1K8 395 aa16.4■□□□□ 0.22
MDC1-206ENST00000489540 LAS2Q8IYD9 372 aa16.4■□□□□ 0.22
MDC1-206ENST00000489540 OR11G2Q8NGC1 345 aa16.4■□□□□ 0.22
MDC1-206ENST00000489540 MZB1Q8WU39 189 aa16.4■□□□□ 0.22
MDC1-206ENST00000489540 GAL3ST3Q96A11 431 aa16.4■□□□□ 0.22
MDC1-206ENST00000489540 FAR2Q96K12 515 aa16.4■□□□□ 0.22
MDC1-206ENST00000489540 OR1F2PQ96R84 312 aa16.4■□□□□ 0.22
MDC1-206ENST00000489540 MLXIPLQ9NP71 852 aa16.4■□□□□ 0.22
MDC1-206ENST00000489540 DCDC2Q9UHG0 476 aa16.4■□□□□ 0.22
MDC1-206ENST00000489540 PCDHGB7Q9Y5F8 929 aa16.4■□□□□ 0.22
MDC1-206ENST00000489540 FER1L5A0AVI2 2057 aa16.4■□□□□ 0.22
MDC1-206ENST00000489540 ATRXP46100 2492 aa16.4■□□□□ 0.22
MDC1-206ENST00000489540 MDC1Q14676 2089 aaKnown RBP16.39■□□□□ 0.22
MDC1-206ENST00000489540 A6NL46 340 aa16.39■□□□□ 0.21
MDC1-206ENST00000489540 CHST10O43529 356 aa16.39■□□□□ 0.21
MDC1-206ENST00000489540 SIX3O95343 332 aaPredicted RBP16.39■□□□□ 0.21
MDC1-206ENST00000489540 PYGBP11216 843 aa16.39■□□□□ 0.21
MDC1-206ENST00000489540 TAC1P20366 129 aa16.39■□□□□ 0.21
MDC1-206ENST00000489540 EEF1DP29692 281 aaKnown RBP16.39■□□□□ 0.21
MDC1-206ENST00000489540 PGDP52209 483 aa16.39■□□□□ 0.21
MDC1-206ENST00000489540 BTN3A2P78410 334 aa16.39■□□□□ 0.21
MDC1-206ENST00000489540 TGM3Q08188 693 aa16.39■□□□□ 0.21
MDC1-206ENST00000489540 ADPRMQ3LIE5 342 aa16.39■□□□□ 0.21
MDC1-206ENST00000489540 MINDY4Q4G0A6 757 aa16.39■□□□□ 0.21
MDC1-206ENST00000489540 ASB18Q6ZVZ8 466 aa16.39■□□□□ 0.21
MDC1-206ENST00000489540 GOLGA7Q7Z5G4 137 aa16.39■□□□□ 0.21
MDC1-206ENST00000489540 VN1R5Q7Z5H4 357 aa16.39■□□□□ 0.21
MDC1-206ENST00000489540 TMEM151AQ8N4L1 468 aa16.39■□□□□ 0.21
MDC1-206ENST00000489540 SRFBP1Q8NEF9 429 aaKnown RBP16.39■□□□□ 0.21
MDC1-206ENST00000489540 FDCSPQ8NFU4 85 aa16.39■□□□□ 0.21
MDC1-206ENST00000489540 AENQ8WTP8 325 aaKnown RBP16.39■□□□□ 0.21
MDC1-206ENST00000489540 METTL21AQ8WXB1 218 aa16.39■□□□□ 0.21
MDC1-206ENST00000489540 MS4A6EQ96DS6 147 aa16.39■□□□□ 0.21
MDC1-206ENST00000489540 REXO4Q9GZR2 422 aaKnown RBP16.39■□□□□ 0.21
MDC1-206ENST00000489540 IPPKQ9H8X2 491 aa16.39■□□□□ 0.21
MDC1-206ENST00000489540 ACTR8Q9H981 624 aa16.39■□□□□ 0.21
MDC1-206ENST00000489540 PRM3Q9NNZ6 103 aa16.39■□□□□ 0.21
MDC1-206ENST00000489540 TP53TG5Q9Y2B4 290 aa16.39■□□□□ 0.21
MDC1-206ENST00000489540 PCDHGA11Q9Y5H2 935 aa16.39■□□□□ 0.21
MDC1-206ENST00000489540 ZNF860A6NHJ4 632 aa16.38■□□□□ 0.21
MDC1-206ENST00000489540 LRRC14BA6NHZ5 514 aa16.38■□□□□ 0.21
MDC1-206ENST00000489540 GOLGA8RI6L899 631 aa16.38■□□□□ 0.21
MDC1-206ENST00000489540 CDH16O75309 829 aa16.38■□□□□ 0.21
MDC1-206ENST00000489540 ALOX12BO75342 701 aa16.38■□□□□ 0.21
MDC1-206ENST00000489540 JRKO75564 520 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms