RNA–Protein interactions for RNA: ENST00000489003.5

FDPS-213, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-213ENST00000489003 PCDHGA11Q9Y5H2 935 aa14.39□□□□□ -0.11
FDPS-213ENST00000489003 C9J4A7 227 aa14.38□□□□□ -0.11
FDPS-213ENST00000489003 H0YIG0 161 aa14.38□□□□□ -0.11
FDPS-213ENST00000489003 K7ENP7 123 aa14.38□□□□□ -0.11
FDPS-213ENST00000489003 SGK494L7N484 410 aa14.38□□□□□ -0.11
FDPS-213ENST00000489003 CREG1O75629 220 aa14.38□□□□□ -0.11
FDPS-213ENST00000489003 NSA2O95478 260 aaKnown RBP14.38□□□□□ -0.11
FDPS-213ENST00000489003 RECKO95980 971 aa14.38□□□□□ -0.11
FDPS-213ENST00000489003 ALBP02768 609 aa14.38□□□□□ -0.11
FDPS-213ENST00000489003 CD63P08962 238 aa14.38□□□□□ -0.11
FDPS-213ENST00000489003 MYZAPP0CAP1 466 aa14.38□□□□□ -0.11
FDPS-213ENST00000489003 PCNAP12004 261 aa14.38□□□□□ -0.11
FDPS-213ENST00000489003 ALOX12P18054 663 aa14.38□□□□□ -0.11
FDPS-213ENST00000489003 IL1RNP18510 177 aa14.38□□□□□ -0.11
FDPS-213ENST00000489003 ALDH3A1P30838 453 aa14.38□□□□□ -0.11
FDPS-213ENST00000489003 HNRNPH1P31943 449 aaKnown RBP14.38□□□□□ -0.11
FDPS-213ENST00000489003 NAGLUP54802 743 aa14.38□□□□□ -0.11
FDPS-213ENST00000489003 TMPRSS3P57727 454 aa14.38□□□□□ -0.11
FDPS-213ENST00000489003 FOXL2P58012 376 aa14.38□□□□□ -0.11
FDPS-213ENST00000489003 CXADRP78310 365 aa14.38□□□□□ -0.11
FDPS-213ENST00000489003 MPP2Q14168 576 aa14.38□□□□□ -0.11
FDPS-213ENST00000489003 PCLAFQ15004 111 aa14.38□□□□□ -0.11
FDPS-213ENST00000489003 ZRSR2Q15696 482 aaKnown RBP14.38□□□□□ -0.11
FDPS-213ENST00000489003 RBBP7Q16576 425 aa14.38□□□□□ -0.11
FDPS-213ENST00000489003 SYT16Q17RD7 645 aa14.38□□□□□ -0.11
FDPS-213ENST00000489003 ADPRMQ3LIE5 342 aa14.38□□□□□ -0.11
FDPS-213ENST00000489003 ARHGAP40Q5TG30 622 aa14.38□□□□□ -0.11
FDPS-213ENST00000489003 FAM69BQ5VUD6 431 aa14.38□□□□□ -0.11
FDPS-213ENST00000489003 INO80CQ6PI98 192 aaPredicted RBP14.38□□□□□ -0.11
FDPS-213ENST00000489003 HDXQ7Z353 690 aa14.38□□□□□ -0.11
FDPS-213ENST00000489003 RNF175Q8N4F7 328 aa14.38□□□□□ -0.11
FDPS-213ENST00000489003 CCNYL1Q8N7R7 359 aa14.38□□□□□ -0.11
FDPS-213ENST00000489003 AMER3Q8N944 861 aa14.38□□□□□ -0.11
FDPS-213ENST00000489003 WDR20Q8TBZ3 569 aa14.38□□□□□ -0.11
FDPS-213ENST00000489003 MS4A6EQ96DS6 147 aa14.38□□□□□ -0.11
FDPS-213ENST00000489003 GSTO2Q9H4Y5 243 aa14.38□□□□□ -0.11
FDPS-213ENST00000489003 ACTL8Q9H568 366 aa14.38□□□□□ -0.11
FDPS-213ENST00000489003 PRORYQ9H606 182 aa14.38□□□□□ -0.11
FDPS-213ENST00000489003 ANKHQ9HCJ1 492 aa14.38□□□□□ -0.11
FDPS-213ENST00000489003 ADGRE2Q9UHX3 823 aa14.38□□□□□ -0.11
FDPS-213ENST00000489003 MID2Q9UJV3 735 aa14.38□□□□□ -0.11
FDPS-213ENST00000489003 TCFL5Q9UL49 500 aa14.38□□□□□ -0.11
FDPS-213ENST00000489003 NAALAD2Q9Y3Q0 740 aa14.38□□□□□ -0.11
FDPS-213ENST00000489003 ACTL7BQ9Y614 415 aa14.38□□□□□ -0.11
FDPS-213ENST00000489003 PTPRQQ9UMZ3 2332 aa14.38□□□□□ -0.11
FDPS-213ENST00000489003 URADA6NGE7 173 aa14.37□□□□□ -0.11
FDPS-213ENST00000489003 VSTM2BA6NLU5 285 aa14.37□□□□□ -0.11
FDPS-213ENST00000489003 ZNF891A8MT65 544 aaPredicted RBP14.37□□□□□ -0.11
FDPS-213ENST00000489003 C4orf51C9J302 202 aa14.37□□□□□ -0.11
FDPS-213ENST00000489003 FFAR3O14843 346 aa14.37□□□□□ -0.11
FDPS-213ENST00000489003 GPR42O15529 346 aa14.37□□□□□ -0.11
FDPS-213ENST00000489003 GALR3O60755 368 aaPredicted RBP14.37□□□□□ -0.11
FDPS-213ENST00000489003 TRIM13O60858 407 aa14.37□□□□□ -0.11
FDPS-213ENST00000489003 KLHL18O94889 574 aa14.37□□□□□ -0.11
FDPS-213ENST00000489003 OTCP00480 354 aa14.37□□□□□ -0.11
FDPS-213ENST00000489003 TGFB1P01137 390 aa14.37□□□□□ -0.11
FDPS-213ENST00000489003 ZNF888P0CJ79 500 aaPredicted RBP14.37□□□□□ -0.11
FDPS-213ENST00000489003 FBLP22087 321 aaKnown RBP14.37□□□□□ -0.11
FDPS-213ENST00000489003 ARL1P40616 181 aaPredicted RBP14.37□□□□□ -0.11
FDPS-213ENST00000489003 ETV4P43268 484 aa14.37□□□□□ -0.11
FDPS-213ENST00000489003 NEK2P51955 445 aa14.37□□□□□ -0.11
FDPS-213ENST00000489003 STXBP1P61764 594 aaKnown RBP14.37□□□□□ -0.11
FDPS-213ENST00000489003 MAT1AQ00266 395 aaKnown RBP14.37□□□□□ -0.11
FDPS-213ENST00000489003 ERV3-1Q14264 604 aa14.37□□□□□ -0.11
FDPS-213ENST00000489003 HERC3Q15034 1050 aa14.37□□□□□ -0.11
FDPS-213ENST00000489003 NKG7Q16617 165 aa14.37□□□□□ -0.11
FDPS-213ENST00000489003 COL28A1Q2UY09 1125 aa14.37□□□□□ -0.11
FDPS-213ENST00000489003 VWA2Q5GFL6 755 aa14.37□□□□□ -0.11
FDPS-213ENST00000489003 LIPMQ5VYY2 423 aa14.37□□□□□ -0.11
FDPS-213ENST00000489003 FAM219BQ5XKK7 198 aa14.37□□□□□ -0.11
FDPS-213ENST00000489003 SYVN1Q86TM6 617 aa14.37□□□□□ -0.11
FDPS-213ENST00000489003 HUS1BQ8NHY5 278 aa14.37□□□□□ -0.11
FDPS-213ENST00000489003 STT3BQ8TCJ2 826 aa14.37□□□□□ -0.11
FDPS-213ENST00000489003 SNRNP27Q8WVK2 155 aaKnown RBP14.37□□□□□ -0.11
FDPS-213ENST00000489003 STARD8Q92502 1023 aa14.37□□□□□ -0.11
FDPS-213ENST00000489003 FKBP10Q96AY3 582 aa14.37□□□□□ -0.11
FDPS-213ENST00000489003 MTFMTQ96DP5 389 aaKnown RBP14.37□□□□□ -0.11
FDPS-213ENST00000489003 F2RL3Q96RI0 385 aa14.37□□□□□ -0.11
FDPS-213ENST00000489003 YIPF2Q9BWQ6 316 aa14.37□□□□□ -0.11
FDPS-213ENST00000489003 GATA5Q9BWX5 397 aaPredicted RBP14.37□□□□□ -0.11
FDPS-213ENST00000489003 MS4A8Q9BY19 250 aa14.37□□□□□ -0.11
FDPS-213ENST00000489003 SLC26A1Q9H2B4 701 aa14.37□□□□□ -0.11
FDPS-213ENST00000489003 PRDM7Q9NQW5 492 aa14.37□□□□□ -0.11
FDPS-213ENST00000489003 USP24Q9UPU5 2620 aa14.37□□□□□ -0.11
FDPS-213ENST00000489003 IGLV3-12A0A075B6K2 115 aa14.36□□□□□ -0.11
FDPS-213ENST00000489003 UBFD1O14562 309 aaKnown RBP14.36□□□□□ -0.11
FDPS-213ENST00000489003 SH3BGRLO75368 114 aa14.36□□□□□ -0.11
FDPS-213ENST00000489003 OR4F21O95013 312 aa14.36□□□□□ -0.11
FDPS-213ENST00000489003 SERPINB1P30740 379 aa14.36□□□□□ -0.11
FDPS-213ENST00000489003 PIK3CBP42338 1070 aa14.36□□□□□ -0.11
FDPS-213ENST00000489003 CCR10P46092 362 aa14.36□□□□□ -0.11
FDPS-213ENST00000489003 NAA20P61599 178 aa14.36□□□□□ -0.11
FDPS-213ENST00000489003 RPS13P62277 151 aaKnown RBP14.36□□□□□ -0.11
FDPS-213ENST00000489003 LCP2Q13094 533 aa14.36□□□□□ -0.11
FDPS-213ENST00000489003 DDX39BQ13838 428 aaKnown RBP14.36□□□□□ -0.11
FDPS-213ENST00000489003 DSG2Q14126 1118 aa14.36□□□□□ -0.11
FDPS-213ENST00000489003 GGTA1PQ4G0N0 100 aa14.36□□□□□ -0.11
FDPS-213ENST00000489003 DEFB134Q4QY38 66 aa14.36□□□□□ -0.11
FDPS-213ENST00000489003 CRTC2Q53ET0 693 aaPredicted RBP14.36□□□□□ -0.11
FDPS-213ENST00000489003 DEPDC1Q5TB30 811 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms