RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 TAZQ16635 292 aa3.3□□□□□ -1.88
SSR1-209ENST00000488834 ZNF542PQ5EBM4 170 aa3.3□□□□□ -1.88
SSR1-209ENST00000488834 FAM46CQ5VWP2 391 aa3.3□□□□□ -1.88
SSR1-209ENST00000488834 SUSD1Q6UWL2 747 aa3.3□□□□□ -1.88
SSR1-209ENST00000488834 GALNTL5Q7Z4T8 443 aa3.3□□□□□ -1.88
SSR1-209ENST00000488834 FAM131BQ86XD5 332 aa3.3□□□□□ -1.88
SSR1-209ENST00000488834 SNX32Q86XE0 403 aa3.3□□□□□ -1.88
SSR1-209ENST00000488834 C4orf19Q8IY42 314 aa3.3□□□□□ -1.88
SSR1-209ENST00000488834 APCDD1Q8J025 514 aa3.3□□□□□ -1.88
SSR1-209ENST00000488834 CCDC185Q8N715 623 aa3.3□□□□□ -1.88
SSR1-209ENST00000488834 NCOA7Q8NI08 942 aa3.3□□□□□ -1.88
SSR1-209ENST00000488834 RSPH1Q8WYR4 309 aa3.3□□□□□ -1.88
SSR1-209ENST00000488834 ST6GALNAC6Q969X2 333 aa3.3□□□□□ -1.88
SSR1-209ENST00000488834 EXOC4Q96A65 974 aa3.3□□□□□ -1.88
SSR1-209ENST00000488834 BSCL2Q96G97 398 aaPredicted RBP3.3□□□□□ -1.88
SSR1-209ENST00000488834 RAB11FIP5Q9BXF6 653 aa3.3□□□□□ -1.88
SSR1-209ENST00000488834 TRIM6Q9C030 488 aaPredicted RBP3.3□□□□□ -1.88
SSR1-209ENST00000488834 RAB9BQ9NP90 201 aa3.3□□□□□ -1.88
SSR1-209ENST00000488834 POMT1Q9Y6A1 747 aa3.3□□□□□ -1.88
SSR1-209ENST00000488834 TRAV34A0A0B4J273 112 aa3.29□□□□□ -1.88
SSR1-209ENST00000488834 FAM170AA1A519 330 aa3.29□□□□□ -1.88
SSR1-209ENST00000488834 PRSS46E5RG02 174 aa3.29□□□□□ -1.88
SSR1-209ENST00000488834 NPIPA3F8WFD2 350 aa3.29□□□□□ -1.88
SSR1-209ENST00000488834 PGRMC2O15173 223 aa3.29□□□□□ -1.88
SSR1-209ENST00000488834 MAGEB2O15479 319 aa3.29□□□□□ -1.88
SSR1-209ENST00000488834 KIF5CO60282 957 aa3.29□□□□□ -1.88
SSR1-209ENST00000488834 MTRF1O75570 445 aaKnown RBP3.29□□□□□ -1.88
SSR1-209ENST00000488834 MOCS2O96007 188 aaPredicted RBP3.29□□□□□ -1.88
SSR1-209ENST00000488834 SP9P0CG40 484 aa3.29□□□□□ -1.88
SSR1-209ENST00000488834 GLULP15104 373 aa3.29□□□□□ -1.88
SSR1-209ENST00000488834 LBPP18428 481 aa3.29□□□□□ -1.88
SSR1-209ENST00000488834 C4BPBP20851 252 aa3.29□□□□□ -1.88
SSR1-209ENST00000488834 CTNNA2P26232 953 aa3.29□□□□□ -1.88
SSR1-209ENST00000488834 PKLRP30613 574 aa3.29□□□□□ -1.88
SSR1-209ENST00000488834 TLX1P31314 330 aaPredicted RBP3.29□□□□□ -1.88
SSR1-209ENST00000488834 DUTP33316 252 aaKnown RBP3.29□□□□□ -1.88
SSR1-209ENST00000488834 NAGLUP54802 743 aa3.29□□□□□ -1.88
SSR1-209ENST00000488834 ERVK-16P61578 105 aa3.29□□□□□ -1.88
SSR1-209ENST00000488834 SCN1BQ07699 218 aa3.29□□□□□ -1.88
SSR1-209ENST00000488834 KIAA0141Q14154 515 aaPredicted RBP3.29□□□□□ -1.88
SSR1-209ENST00000488834 LY6DQ14210 128 aa3.29□□□□□ -1.88
SSR1-209ENST00000488834 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.29□□□□□ -1.88
SSR1-209ENST00000488834 CAVIN1Q6NZI2 390 aaKnown RBP3.29□□□□□ -1.88
SSR1-209ENST00000488834 DHRS11Q6UWP2 260 aa3.29□□□□□ -1.88
SSR1-209ENST00000488834 C3P1Q6ZMU1 363 aa3.29□□□□□ -1.88
SSR1-209ENST00000488834 ANKRD33Q7Z3H0 272 aa3.29□□□□□ -1.88
SSR1-209ENST00000488834 RNF130Q86XS8 419 aa3.29□□□□□ -1.88
SSR1-209ENST00000488834 SLC22A15Q8IZD6 547 aa3.29□□□□□ -1.88
SSR1-209ENST00000488834 NKAIN3Q8N8D7 197 aa3.29□□□□□ -1.88
SSR1-209ENST00000488834 OR9Q2Q8NGE9 314 aa3.29□□□□□ -1.88
SSR1-209ENST00000488834 DEPDC1BQ8WUY9 529 aa3.29□□□□□ -1.88
SSR1-209ENST00000488834 CASP10Q92851 521 aa3.29□□□□□ -1.88
SSR1-209ENST00000488834 UBAC1Q9BSL1 405 aa3.29□□□□□ -1.88
SSR1-209ENST00000488834 CHCHD5Q9BSY4 110 aa3.29□□□□□ -1.88
SSR1-209ENST00000488834 ALKBH7Q9BT30 221 aaPredicted RBP3.29□□□□□ -1.88
SSR1-209ENST00000488834 THUMPD3Q9BV44 507 aaKnown RBP3.29□□□□□ -1.88
SSR1-209ENST00000488834 C10orf88Q9H8K7 445 aa3.29□□□□□ -1.88
SSR1-209ENST00000488834 RPS10P5Q9NQ39 176 aa3.29□□□□□ -1.88
SSR1-209ENST00000488834 IARS2Q9NSE4 1012 aaKnown RBP3.29□□□□□ -1.88
SSR1-209ENST00000488834 KLK11Q9UBX7 282 aa3.29□□□□□ -1.88
SSR1-209ENST00000488834 ZNF510Q9Y2H8 683 aa3.29□□□□□ -1.88
SSR1-209ENST00000488834 NOTCH3Q9UM47 2321 aa3.28□□□□□ -1.88
SSR1-209ENST00000488834 IGHV4-30-2A0A087WSY4 118 aa3.28□□□□□ -1.88
SSR1-209ENST00000488834 A0A087WV48 116 aa3.28□□□□□ -1.88
SSR1-209ENST00000488834 NKX6-3A6NJ46 265 aa3.28□□□□□ -1.88
SSR1-209ENST00000488834 EPM2AB3EWF7 344 aa3.28□□□□□ -1.88
SSR1-209ENST00000488834 FCGR3BO75015 233 aa3.28□□□□□ -1.88
SSR1-209ENST00000488834 FAM58BPP0C7Q3 252 aa3.28□□□□□ -1.88
SSR1-209ENST00000488834 ADORA3P0DMS8 318 aa3.28□□□□□ -1.88
SSR1-209ENST00000488834 CD59P13987 128 aa3.28□□□□□ -1.88
SSR1-209ENST00000488834 GOT1P17174 413 aa3.28□□□□□ -1.88
SSR1-209ENST00000488834 IFNAR1P17181 557 aa3.28□□□□□ -1.88
SSR1-209ENST00000488834 ADRA2CP18825 462 aa3.28□□□□□ -1.88
SSR1-209ENST00000488834 PSMB4P28070 264 aa3.28□□□□□ -1.88
SSR1-209ENST00000488834 OAS2P29728 719 aaKnown RBP3.28□□□□□ -1.88
SSR1-209ENST00000488834 SOAT1P35610 550 aa3.28□□□□□ -1.88
SSR1-209ENST00000488834 OR3A3P47888 321 aa3.28□□□□□ -1.88
SSR1-209ENST00000488834 ROR1Q01973 937 aa3.28□□□□□ -1.88
SSR1-209ENST00000488834 GCKRQ14397 625 aa3.28□□□□□ -1.88
SSR1-209ENST00000488834 PPA1Q15181 289 aa3.28□□□□□ -1.88
SSR1-209ENST00000488834 KRT71Q3SY84 523 aa3.28□□□□□ -1.88
SSR1-209ENST00000488834 TXNRD3NBQ6F5E7 133 aa3.28□□□□□ -1.88
SSR1-209ENST00000488834 BTNL8Q6UX41 500 aa3.28□□□□□ -1.88
SSR1-209ENST00000488834 TMEM182Q6ZP80 229 aaPredicted RBP3.28□□□□□ -1.88
SSR1-209ENST00000488834 SPATA19Q7Z5L4 167 aa3.28□□□□□ -1.88
SSR1-209ENST00000488834 GPR141Q7Z602 305 aa3.28□□□□□ -1.88
SSR1-209ENST00000488834 OR4N5Q8IXE1 308 aa3.28□□□□□ -1.88
SSR1-209ENST00000488834 KLHL7Q8IXQ5 586 aa3.28□□□□□ -1.88
SSR1-209ENST00000488834 Q8N377 158 aa3.28□□□□□ -1.88
SSR1-209ENST00000488834 FAM162AQ96A26 154 aa3.28□□□□□ -1.88
SSR1-209ENST00000488834 ZNF597Q96LX8 424 aa3.28□□□□□ -1.88
SSR1-209ENST00000488834 PSMB7Q99436 277 aa3.28□□□□□ -1.88
SSR1-209ENST00000488834 HEXA-AS1Q9H8Q6 139 aa3.28□□□□□ -1.88
SSR1-209ENST00000488834 MRGBPQ9NV56 204 aa3.28□□□□□ -1.88
SSR1-209ENST00000488834 CHCHD3Q9NX63 227 aaKnown RBP3.28□□□□□ -1.88
SSR1-209ENST00000488834 DBF4Q9UBU7 674 aaPredicted RBP3.28□□□□□ -1.88
SSR1-209ENST00000488834 SATB2Q9UPW6 733 aa3.28□□□□□ -1.88
SSR1-209ENST00000488834 CSAG2Q9Y5P2 127 aa3.28□□□□□ -1.88
SSR1-209ENST00000488834 CACNA1FO60840 1977 aa3.27□□□□□ -1.89
SSR1-209ENST00000488834 CENPJQ9HC77 1338 aaPredicted RBP3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms