RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 OR2B2Q9GZK3 357 aa3.46□□□□□ -1.86
ECHDC1-217ENST00000488087 XAB2Q9HCS7 855 aaKnown RBP3.46□□□□□ -1.86
ECHDC1-217ENST00000488087 PPANQ9NQ55 473 aaKnown RBP3.46□□□□□ -1.86
ECHDC1-217ENST00000488087 TXNDC16Q9P2K2 825 aa3.46□□□□□ -1.86
ECHDC1-217ENST00000488087 CIDEBQ9UHD4 219 aa3.46□□□□□ -1.86
ECHDC1-217ENST00000488087 WDR83OSQ9Y284 106 aa3.46□□□□□ -1.86
ECHDC1-217ENST00000488087 ZFP37Q9Y6Q3 630 aaPredicted RBP3.46□□□□□ -1.86
ECHDC1-217ENST00000488087 MYO5CQ9NQX4 1742 aa3.46□□□□□ -1.86
ECHDC1-217ENST00000488087 KIAA0232Q92628 1395 aa3.46□□□□□ -1.86
ECHDC1-217ENST00000488087 NPATQ14207 1427 aa3.45□□□□□ -1.86
ECHDC1-217ENST00000488087 HMGXB3Q12766 1538 aa3.45□□□□□ -1.86
ECHDC1-217ENST00000488087 ABCA6Q8N139 1617 aa3.45□□□□□ -1.86
ECHDC1-217ENST00000488087 AK9Q5TCS8 1911 aa3.45□□□□□ -1.86
ECHDC1-217ENST00000488087 IGHV4-4A0A075B6R2 117 aa3.45□□□□□ -1.86
ECHDC1-217ENST00000488087 GOLGA8KD6RF30 607 aa3.45□□□□□ -1.86
ECHDC1-217ENST00000488087 F8VZ95 297 aa3.45□□□□□ -1.86
ECHDC1-217ENST00000488087 IFIT3O14879 490 aaKnown RBP3.45□□□□□ -1.86
ECHDC1-217ENST00000488087 KLF11O14901 512 aa3.45□□□□□ -1.86
ECHDC1-217ENST00000488087 KIF5CO60282 957 aa3.45□□□□□ -1.86
ECHDC1-217ENST00000488087 DFFBO76075 338 aa3.45□□□□□ -1.86
ECHDC1-217ENST00000488087 NADKO95544 446 aaPredicted RBP3.45□□□□□ -1.86
ECHDC1-217ENST00000488087 GBAP04062 536 aa3.45□□□□□ -1.86
ECHDC1-217ENST00000488087 CEACAM1P13688 526 aa3.45□□□□□ -1.86
ECHDC1-217ENST00000488087 DARSP14868 501 aaKnown RBP3.45□□□□□ -1.86
ECHDC1-217ENST00000488087 PSMD7P51665 324 aa3.45□□□□□ -1.86
ECHDC1-217ENST00000488087 ATP12AP54707 1039 aa3.45□□□□□ -1.86
ECHDC1-217ENST00000488087 SNRPD1P62314 119 aaKnown RBP3.45□□□□□ -1.86
ECHDC1-217ENST00000488087 SP3Q02447 781 aa3.45□□□□□ -1.86
ECHDC1-217ENST00000488087 PTK6Q13882 451 aa3.45□□□□□ -1.86
ECHDC1-217ENST00000488087 HERC3Q15034 1050 aa3.45□□□□□ -1.86
ECHDC1-217ENST00000488087 NPTX1Q15818 432 aa3.45□□□□□ -1.86
ECHDC1-217ENST00000488087 WHAMMP3Q1A5X7 153 aa3.45□□□□□ -1.86
ECHDC1-217ENST00000488087 SGSM1Q2NKQ1 1148 aa3.45□□□□□ -1.86
ECHDC1-217ENST00000488087 TMEM30BQ3MIR4 351 aa3.45□□□□□ -1.86
ECHDC1-217ENST00000488087 KBTBD12Q3ZCT8 623 aa3.45□□□□□ -1.86
ECHDC1-217ENST00000488087 LRRC23Q53EV4 343 aaPredicted RBP3.45□□□□□ -1.86
ECHDC1-217ENST00000488087 SLC35D3Q5M8T2 416 aa3.45□□□□□ -1.86
ECHDC1-217ENST00000488087 FAM91A1Q658Y4 838 aa3.45□□□□□ -1.86
ECHDC1-217ENST00000488087 ATL3Q6DD88 541 aa3.45□□□□□ -1.86
ECHDC1-217ENST00000488087 SHQ1Q6PI26 577 aaKnown RBP3.45□□□□□ -1.86
ECHDC1-217ENST00000488087 C6orf89Q6UWU4 347 aa3.45□□□□□ -1.86
ECHDC1-217ENST00000488087 CCDC80Q76M96 950 aa3.45□□□□□ -1.86
ECHDC1-217ENST00000488087 BZW1Q7L1Q6 419 aaKnown RBP3.45□□□□□ -1.86
ECHDC1-217ENST00000488087 MYOCDQ8IZQ8 938 aa3.45□□□□□ -1.86
ECHDC1-217ENST00000488087 BMPERQ8N8U9 685 aa3.45□□□□□ -1.86
ECHDC1-217ENST00000488087 DDHD1Q8NEL9 900 aa3.45□□□□□ -1.86
ECHDC1-217ENST00000488087 OR2T11Q8NH01 316 aa3.45□□□□□ -1.86
ECHDC1-217ENST00000488087 VANGL1Q8TAA9 524 aaPredicted RBP3.45□□□□□ -1.86
ECHDC1-217ENST00000488087 MGARPQ8TDB4 240 aa3.45□□□□□ -1.86
ECHDC1-217ENST00000488087 TMEM190Q8WZ59 177 aa3.45□□□□□ -1.86
ECHDC1-217ENST00000488087 PROX1Q92786 737 aa3.45□□□□□ -1.86
ECHDC1-217ENST00000488087 TEKT1Q969V4 418 aa3.45□□□□□ -1.86
ECHDC1-217ENST00000488087 RBM41Q96IZ5 413 aaKnown RBP3.45□□□□□ -1.86
ECHDC1-217ENST00000488087 RPGRIP1Q96KN7 1286 aa3.45□□□□□ -1.86
ECHDC1-217ENST00000488087 PI4K2AQ9BTU6 479 aa3.45□□□□□ -1.86
ECHDC1-217ENST00000488087 RBM4Q9BWF3 364 aaKnown RBP3.45□□□□□ -1.86
ECHDC1-217ENST00000488087 SLC2A11Q9BYW1 496 aa3.45□□□□□ -1.86
ECHDC1-217ENST00000488087 TSGA10Q9BZW7 698 aa3.45□□□□□ -1.86
ECHDC1-217ENST00000488087 MTMR12Q9C0I1 747 aa3.45□□□□□ -1.86
ECHDC1-217ENST00000488087 TNMDQ9H2S6 317 aa3.45□□□□□ -1.86
ECHDC1-217ENST00000488087 CPVLQ9H3G5 476 aa3.45□□□□□ -1.86
ECHDC1-217ENST00000488087 CHST11Q9NPF2 352 aa3.45□□□□□ -1.86
ECHDC1-217ENST00000488087 ZNF71Q9NQZ8 489 aaPredicted RBP3.45□□□□□ -1.86
ECHDC1-217ENST00000488087 ANO10Q9NW15 660 aa3.45□□□□□ -1.86
ECHDC1-217ENST00000488087 GRID1Q9ULK0 1009 aa3.45□□□□□ -1.86
ECHDC1-217ENST00000488087 TMCO1Q9UM00 188 aa3.45□□□□□ -1.86
ECHDC1-217ENST00000488087 BARX2Q9UMQ3 279 aaPredicted RBP3.45□□□□□ -1.86
ECHDC1-217ENST00000488087 ZNF510Q9Y2H8 683 aa3.45□□□□□ -1.86
ECHDC1-217ENST00000488087 MRPS28Q9Y2Q9 187 aaKnown RBP3.45□□□□□ -1.86
ECHDC1-217ENST00000488087 NSD2O96028 1365 aa3.45□□□□□ -1.86
ECHDC1-217ENST00000488087 CEMIPQ8WUJ3 1361 aa3.45□□□□□ -1.86
ECHDC1-217ENST00000488087 ZNF518AQ6AHZ1 1483 aa3.45□□□□□ -1.86
ECHDC1-217ENST00000488087 TTC37Q6PGP7 1564 aa3.45□□□□□ -1.86
ECHDC1-217ENST00000488087 GRIN2DO15399 1336 aa3.44□□□□□ -1.86
ECHDC1-217ENST00000488087 ABCC4O15439 1325 aa3.44□□□□□ -1.86
ECHDC1-217ENST00000488087 EVC2Q86UK5 1308 aa3.44□□□□□ -1.86
ECHDC1-217ENST00000488087 PTPRTO14522 1441 aa3.44□□□□□ -1.86
ECHDC1-217ENST00000488087 DUOX2Q9NRD8 1548 aa3.44□□□□□ -1.86
ECHDC1-217ENST00000488087 ABCA9Q8IUA7 1624 aa3.44□□□□□ -1.86
ECHDC1-217ENST00000488087 KIF26BQ2KJY2 2108 aa3.44□□□□□ -1.86
ECHDC1-217ENST00000488087 ARHGEF5Q12774 1597 aa3.44□□□□□ -1.86
ECHDC1-217ENST00000488087 A2MP01023 1474 aa3.44□□□□□ -1.86
ECHDC1-217ENST00000488087 EPHB6O15197 1021 aa3.44□□□□□ -1.86
ECHDC1-217ENST00000488087 SNX3O60493 162 aa3.44□□□□□ -1.86
ECHDC1-217ENST00000488087 STX10O60499 249 aa3.44□□□□□ -1.86
ECHDC1-217ENST00000488087 DDHD2O94830 711 aa3.44□□□□□ -1.86
ECHDC1-217ENST00000488087 AP2A2O94973 939 aa3.44□□□□□ -1.86
ECHDC1-217ENST00000488087 MT-ND3P03897 115 aa3.44□□□□□ -1.86
ECHDC1-217ENST00000488087 GSTA1P08263 222 aa3.44□□□□□ -1.86
ECHDC1-217ENST00000488087 FAM157CP0CG43 387 aa3.44□□□□□ -1.86
ECHDC1-217ENST00000488087 CCDC166P0CW27 439 aa3.44□□□□□ -1.86
ECHDC1-217ENST00000488087 ZNF24P17028 368 aa3.44□□□□□ -1.86
ECHDC1-217ENST00000488087 ADRA2CP18825 462 aa3.44□□□□□ -1.86
ECHDC1-217ENST00000488087 ALDH4A1P30038 563 aa3.44□□□□□ -1.86
ECHDC1-217ENST00000488087 ATP5DP30049 168 aa3.44□□□□□ -1.86
ECHDC1-217ENST00000488087 SOAT1P35610 550 aa3.44□□□□□ -1.86
ECHDC1-217ENST00000488087 NKX2-1P43699 371 aaPredicted RBP3.44□□□□□ -1.86
ECHDC1-217ENST00000488087 TRPC1P48995 793 aa3.44□□□□□ -1.86
ECHDC1-217ENST00000488087 LBX1P52954 281 aa3.44□□□□□ -1.86
ECHDC1-217ENST00000488087 UBASH3AP57075 661 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms