RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 MCRIP2Q9BUT9 160 aaKnown RBP3.27□□□□□ -1.89
HMGB1P36-201ENST00000487709 HOXD1Q9GZZ0 328 aa3.27□□□□□ -1.89
HMGB1P36-201ENST00000487709 CUEDC2Q9H467 287 aa3.27□□□□□ -1.89
HMGB1P36-201ENST00000487709 AKIRIN1Q9H9L7 192 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P36-201ENST00000487709 RNPEPL1Q9HAU8 725 aa3.27□□□□□ -1.89
HMGB1P36-201ENST00000487709 B3GAT2Q9NPZ5 323 aa3.27□□□□□ -1.89
HMGB1P36-201ENST00000487709 SPHK2Q9NRA0 654 aa3.27□□□□□ -1.89
HMGB1P36-201ENST00000487709 BARHL2Q9NY43 387 aa3.27□□□□□ -1.89
HMGB1P36-201ENST00000487709 DBF4Q9UBU7 674 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P36-201ENST00000487709 GPR132Q9UNW8 380 aa3.27□□□□□ -1.89
HMGB1P36-201ENST00000487709 CSNK1G3Q9Y6M4 447 aa3.27□□□□□ -1.89
HMGB1P36-201ENST00000487709 A4D1N5 150 aa3.26□□□□□ -1.89
HMGB1P36-201ENST00000487709 NR5A2O00482 541 aa3.26□□□□□ -1.89
HMGB1P36-201ENST00000487709 ATP9AO75110 1047 aa3.26□□□□□ -1.89
HMGB1P36-201ENST00000487709 LETM1O95202 739 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P36-201ENST00000487709 GAS8O95995 478 aa3.26□□□□□ -1.89
HMGB1P36-201ENST00000487709 EEF2P13639 858 aaKnown RBP3.26□□□□□ -1.89
HMGB1P36-201ENST00000487709 ALDH1B1P30837 517 aa3.26□□□□□ -1.89
HMGB1P36-201ENST00000487709 LEPRP48357 1165 aaKnown RBP3.26□□□□□ -1.89
HMGB1P36-201ENST00000487709 NFE2L1Q14494 772 aa3.26□□□□□ -1.89
HMGB1P36-201ENST00000487709 MAPK11Q15759 364 aa3.26□□□□□ -1.89
HMGB1P36-201ENST00000487709 EXT1Q16394 746 aa3.26□□□□□ -1.89
HMGB1P36-201ENST00000487709 TCEAL6Q6IPX3 200 aa3.26□□□□□ -1.89
HMGB1P36-201ENST00000487709 BHLHB9Q6PI77 547 aa3.26□□□□□ -1.89
HMGB1P36-201ENST00000487709 IL17RELQ6ZVW7 336 aa3.26□□□□□ -1.89
HMGB1P36-201ENST00000487709 BTN2A1Q7KYR7 527 aa3.26□□□□□ -1.89
HMGB1P36-201ENST00000487709 PIWIL3Q7Z3Z3 882 aaKnown RBP3.26□□□□□ -1.89
HMGB1P36-201ENST00000487709 RNF149Q8NC42 400 aa3.26□□□□□ -1.89
HMGB1P36-201ENST00000487709 MSANTD4Q8NCY6 345 aa3.26□□□□□ -1.89
HMGB1P36-201ENST00000487709 FIBINQ8TAL6 211 aa3.26□□□□□ -1.89
HMGB1P36-201ENST00000487709 AZIN2Q96A70 460 aa3.26□□□□□ -1.89
HMGB1P36-201ENST00000487709 ANKRD9Q96BM1 317 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P36-201ENST00000487709 AP2M1Q96CW1 435 aa3.26□□□□□ -1.89
HMGB1P36-201ENST00000487709 GPATCH1Q9BRR8 931 aaKnown RBP3.26□□□□□ -1.89
HMGB1P36-201ENST00000487709 UBAC1Q9BSL1 405 aa3.26□□□□□ -1.89
HMGB1P36-201ENST00000487709 ALDH8A1Q9H2A2 487 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P36-201ENST00000487709 MTIF3Q9H2K0 278 aaKnown RBP3.26□□□□□ -1.89
HMGB1P36-201ENST00000487709 VIPAS39Q9H9C1 493 aa3.26□□□□□ -1.89
HMGB1P36-201ENST00000487709 C3orf14Q9HBI5 128 aa3.26□□□□□ -1.89
HMGB1P36-201ENST00000487709 KLK4Q9Y5K2 254 aa3.26□□□□□ -1.89
HMGB1P36-201ENST00000487709 SMAD5-AS1Q9Y6J3 95 aa3.26□□□□□ -1.89
HMGB1P36-201ENST00000487709 COL2A1P02458 1487 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P36-201ENST00000487709 hCG_38984A0A1B0GV85 526 aa3.25□□□□□ -1.89
HMGB1P36-201ENST00000487709 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P36-201ENST00000487709 SLC7A4O43246 635 aa3.25□□□□□ -1.89
HMGB1P36-201ENST00000487709 KIF5CO60282 957 aa3.25□□□□□ -1.89
HMGB1P36-201ENST00000487709 MTRF1O75570 445 aaKnown RBP3.25□□□□□ -1.89
HMGB1P36-201ENST00000487709 CEACAM4O75871 244 aa3.25□□□□□ -1.89
HMGB1P36-201ENST00000487709 GLCEO94923 617 aa3.25□□□□□ -1.89
HMGB1P36-201ENST00000487709 BAG2O95816 211 aa3.25□□□□□ -1.89
HMGB1P36-201ENST00000487709 SLC16A8O95907 504 aa3.25□□□□□ -1.89
HMGB1P36-201ENST00000487709 ANKRD34CP0C6C1 535 aa3.25□□□□□ -1.89
HMGB1P36-201ENST00000487709 FERP16591 822 aa3.25□□□□□ -1.89
HMGB1P36-201ENST00000487709 PRKACGP22612 351 aa3.25□□□□□ -1.89
HMGB1P36-201ENST00000487709 GIFP27352 417 aa3.25□□□□□ -1.89
HMGB1P36-201ENST00000487709 CTNNB1P35222 781 aa3.25□□□□□ -1.89
HMGB1P36-201ENST00000487709 XGP55808 180 aa3.25□□□□□ -1.89
HMGB1P36-201ENST00000487709 ARF5P84085 180 aa3.25□□□□□ -1.89
HMGB1P36-201ENST00000487709 SLC34A1Q06495 639 aa3.25□□□□□ -1.89
HMGB1P36-201ENST00000487709 GCKRQ14397 625 aa3.25□□□□□ -1.89
HMGB1P36-201ENST00000487709 TMEM187Q14656 261 aa3.25□□□□□ -1.89
HMGB1P36-201ENST00000487709 ZNF674Q2M3X9 581 aa3.25□□□□□ -1.89
HMGB1P36-201ENST00000487709 C2orf76Q3KRA6 126 aa3.25□□□□□ -1.89
HMGB1P36-201ENST00000487709 FAM106AQ4KMX7 169 aa3.25□□□□□ -1.89
HMGB1P36-201ENST00000487709 IFI44LQ53G44 452 aa3.25□□□□□ -1.89
HMGB1P36-201ENST00000487709 KLHL10Q6JEL2 608 aa3.25□□□□□ -1.89
HMGB1P36-201ENST00000487709 SLC27A4Q6P1M0 643 aa3.25□□□□□ -1.89
HMGB1P36-201ENST00000487709 IYDQ6PHW0 289 aa3.25□□□□□ -1.89
HMGB1P36-201ENST00000487709 LCLAT1Q6UWP7 414 aa3.25□□□□□ -1.89
HMGB1P36-201ENST00000487709 KIF6Q6ZMV9 814 aa3.25□□□□□ -1.89
HMGB1P36-201ENST00000487709 RAPH1Q70E73 1250 aa3.25□□□□□ -1.89
HMGB1P36-201ENST00000487709 ANKRD33Q7Z3H0 272 aa3.25□□□□□ -1.89
HMGB1P36-201ENST00000487709 TRMT11Q7Z4G4 463 aaKnown RBP3.25□□□□□ -1.89
HMGB1P36-201ENST00000487709 CPEB2Q7Z5Q1 589 aaKnown RBP3.25□□□□□ -1.89
HMGB1P36-201ENST00000487709 LRRTM1Q86UE6 522 aa3.25□□□□□ -1.89
HMGB1P36-201ENST00000487709 CCDC83Q8IWF9 413 aa3.25□□□□□ -1.89
HMGB1P36-201ENST00000487709 KLHDC8AQ8IYD2 350 aa3.25□□□□□ -1.89
HMGB1P36-201ENST00000487709 APCDD1Q8J025 514 aa3.25□□□□□ -1.89
HMGB1P36-201ENST00000487709 NUP37Q8NFH4 326 aa3.25□□□□□ -1.89
HMGB1P36-201ENST00000487709 ZNF519Q8TB69 540 aa3.25□□□□□ -1.89
HMGB1P36-201ENST00000487709 GANCQ8TET4 914 aa3.25□□□□□ -1.89
HMGB1P36-201ENST00000487709 CASP10Q92851 521 aa3.25□□□□□ -1.89
HMGB1P36-201ENST00000487709 SLCO2A1Q92959 643 aa3.25□□□□□ -1.89
HMGB1P36-201ENST00000487709 ULK4Q96C45 1275 aa3.25□□□□□ -1.89
HMGB1P36-201ENST00000487709 ZNF486Q96H40 463 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P36-201ENST00000487709 NSMCE3Q96MG7 304 aa3.25□□□□□ -1.89
HMGB1P36-201ENST00000487709 AGAP3Q96P47 875 aa3.25□□□□□ -1.89
HMGB1P36-201ENST00000487709 PCDHB18PQ96TA0 734 aa3.25□□□□□ -1.89
HMGB1P36-201ENST00000487709 LRRC2Q9BYS8 371 aa3.25□□□□□ -1.89
HMGB1P36-201ENST00000487709 SLC5A7Q9GZV3 580 aa3.25□□□□□ -1.89
HMGB1P36-201ENST00000487709 WWTR1Q9GZV5 400 aa3.25□□□□□ -1.89
HMGB1P36-201ENST00000487709 EGLN3Q9H6Z9 239 aa3.25□□□□□ -1.89
HMGB1P36-201ENST00000487709 UBE2TQ9NPD8 197 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P36-201ENST00000487709 PHPT1Q9NRX4 125 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P36-201ENST00000487709 NLGN3Q9NZ94 848 aa3.25□□□□□ -1.89
HMGB1P36-201ENST00000487709 MTRRQ9UBK8 725 aa3.25□□□□□ -1.89
HMGB1P36-201ENST00000487709 CACNG5Q9UF02 275 aa3.25□□□□□ -1.89
HMGB1P36-201ENST00000487709 SATB2Q9UPW6 733 aa3.25□□□□□ -1.89
HMGB1P36-201ENST00000487709 PCDHGA1Q9Y5H4 931 aa3.25□□□□□ -1.89
HMGB1P36-201ENST00000487709 ZHX2Q9Y6X8 837 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms