RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 CDC26Q8NHZ8 85 aa25.1■■□□□ 1.61
HLA-C-208ENST00000487245 HERVK_113Q902F9 699 aa25.1■■□□□ 1.61
HLA-C-208ENST00000487245 NEIL2Q969S2 332 aa25.1■■□□□ 1.61
HLA-C-208ENST00000487245 SGPP1Q9BX95 441 aa25.1■■□□□ 1.61
HLA-C-208ENST00000487245 OR2AG1Q9H205 316 aa25.1■■□□□ 1.61
HLA-C-208ENST00000487245 PRM3Q9NNZ6 103 aa25.1■■□□□ 1.61
HLA-C-208ENST00000487245 DEC1Q9P2X7 70 aa25.1■■□□□ 1.61
HLA-C-208ENST00000487245 FZD4Q9ULV1 537 aa25.1■■□□□ 1.61
HLA-C-208ENST00000487245 PADI2Q9Y2J8 665 aa25.1■■□□□ 1.61
HLA-C-208ENST00000487245 GABRR3A8MPY1 467 aa25.09■■□□□ 1.61
HLA-C-208ENST00000487245 RGS10O43665 173 aa25.09■■□□□ 1.61
HLA-C-208ENST00000487245 C1GALT1C1LP0DN25 315 aa25.09■■□□□ 1.61
HLA-C-208ENST00000487245 OPRL1P41146 370 aa25.09■■□□□ 1.61
HLA-C-208ENST00000487245 KCNJ10P78508 379 aa25.09■■□□□ 1.61
HLA-C-208ENST00000487245 LAPTM4AQ15012 233 aa25.09■■□□□ 1.61
HLA-C-208ENST00000487245 PROX2Q3B8N5 592 aa25.09■■□□□ 1.61
HLA-C-208ENST00000487245 TMEM52BQ4KMG9 183 aa25.09■■□□□ 1.61
HLA-C-208ENST00000487245 RAET1GQ6H3X3 334 aa25.09■■□□□ 1.61
HLA-C-208ENST00000487245 PRSS48Q7RTY5 328 aa25.09■■□□□ 1.61
HLA-C-208ENST00000487245 IGFN1Q86VF2 1251 aa25.09■■□□□ 1.61
HLA-C-208ENST00000487245 TRAPPC5Q8IUR0 188 aa25.09■■□□□ 1.61
HLA-C-208ENST00000487245 S100ZQ8WXG8 99 aa25.09■■□□□ 1.61
HLA-C-208ENST00000487245 NXPE3Q969Y0 559 aa25.09■■□□□ 1.61
HLA-C-208ENST00000487245 DPH2Q9BQC3 489 aaPredicted RBP25.09■■□□□ 1.61
HLA-C-208ENST00000487245 WDR12Q9GZL7 423 aaKnown RBP25.09■■□□□ 1.61
HLA-C-208ENST00000487245 AKIP1Q9NQ31 210 aa25.09■■□□□ 1.61
HLA-C-208ENST00000487245 IRAK4Q9NWZ3 460 aa25.09■■□□□ 1.61
HLA-C-208ENST00000487245 ADPRHL2Q9NX46 363 aa25.09■■□□□ 1.61
HLA-C-208ENST00000487245 KIF17Q9P2E2 1029 aa25.09■■□□□ 1.61
HLA-C-208ENST00000487245 GULP1Q9UBP9 304 aa25.09■■□□□ 1.61
HLA-C-208ENST00000487245 GPR34Q9UPC5 381 aa25.09■■□□□ 1.61
HLA-C-208ENST00000487245 COQ6Q9Y2Z9 468 aa25.09■■□□□ 1.61
HLA-C-208ENST00000487245 VEGFDO43915 354 aa25.09■■□□□ 1.61
HLA-C-208ENST00000487245 LZTS3O60299 673 aaPredicted RBP25.09■■□□□ 1.61
HLA-C-208ENST00000487245 ETHE1O95571 254 aa25.09■■□□□ 1.61
HLA-C-208ENST00000487245 CYP4B1P13584 511 aa25.09■■□□□ 1.61
HLA-C-208ENST00000487245 MASP1P48740 699 aa25.09■■□□□ 1.61
HLA-C-208ENST00000487245 PXNP49023 591 aaPredicted RBP25.09■■□□□ 1.61
HLA-C-208ENST00000487245 TBPL1P62380 186 aa25.09■■□□□ 1.61
HLA-C-208ENST00000487245 ELAVL3Q14576 367 aaKnown RBP25.09■■□□□ 1.61
HLA-C-208ENST00000487245 TEAD4Q15561 434 aa25.09■■□□□ 1.61
HLA-C-208ENST00000487245 RGS21Q2M5E4 152 aa25.09■■□□□ 1.61
HLA-C-208ENST00000487245 TMPRSS11BQ86T26 416 aa25.09■■□□□ 1.61
HLA-C-208ENST00000487245 GOT1L1Q8NHS2 421 aaPredicted RBP25.09■■□□□ 1.61
HLA-C-208ENST00000487245 SNRNP27Q8WVK2 155 aaKnown RBP25.09■■□□□ 1.61
HLA-C-208ENST00000487245 SMG7Q92540 1137 aaKnown RBP25.09■■□□□ 1.61
HLA-C-208ENST00000487245 ZNF300Q96RE9 604 aaPredicted RBP25.09■■□□□ 1.61
HLA-C-208ENST00000487245 DPEP2Q9H4A9 486 aa25.09■■□□□ 1.61
HLA-C-208ENST00000487245 HMG20AQ9NP66 347 aa25.09■■□□□ 1.61
HLA-C-208ENST00000487245 ZNF282Q9UDV7 671 aaPredicted RBP25.09■■□□□ 1.61
HLA-C-208ENST00000487245 ATP6V1HQ9UI12 483 aa25.09■■□□□ 1.61
HLA-C-208ENST00000487245 VPS4AQ9UN37 437 aa25.09■■□□□ 1.61
HLA-C-208ENST00000487245 PCDHGB3Q9Y5G1 929 aa25.09■■□□□ 1.61
HLA-C-208ENST00000487245 PRRT4C9JH25 899 aa25.08■■□□□ 1.61
HLA-C-208ENST00000487245 RNASET2O00584 256 aaKnown RBP25.08■■□□□ 1.61
HLA-C-208ENST00000487245 DIRAS1O95057 198 aa25.08■■□□□ 1.61
HLA-C-208ENST00000487245 MT-ND2P03891 347 aa25.08■■□□□ 1.61
HLA-C-208ENST00000487245 C6P13671 934 aa25.08■■□□□ 1.61
HLA-C-208ENST00000487245 NPPBP16860 134 aa25.08■■□□□ 1.61
HLA-C-208ENST00000487245 CRYBA2P53672 197 aa25.08■■□□□ 1.61
HLA-C-208ENST00000487245 RPS13P62277 151 aaKnown RBP25.08■■□□□ 1.61
HLA-C-208ENST00000487245 NPRL3Q12980 569 aa25.08■■□□□ 1.61
HLA-C-208ENST00000487245 ELOAQ14241 798 aaKnown RBP25.08■■□□□ 1.61
HLA-C-208ENST00000487245 RGNQ15493 299 aa25.08■■□□□ 1.61
HLA-C-208ENST00000487245 GALNT10Q86SR1 603 aa25.08■■□□□ 1.61
HLA-C-208ENST00000487245 LAS2Q8IYD9 372 aa25.08■■□□□ 1.61
HLA-C-208ENST00000487245 ATG16L2Q8NAA4 619 aa25.08■■□□□ 1.61
HLA-C-208ENST00000487245 SETD7Q8WTS6 366 aaKnown RBP25.08■■□□□ 1.61
HLA-C-208ENST00000487245 RSPRY1Q96DX4 576 aa25.08■■□□□ 1.61
HLA-C-208ENST00000487245 BHLHE41Q9C0J9 482 aaPredicted RBP25.08■■□□□ 1.61
HLA-C-208ENST00000487245 DYRK4Q9NR20 520 aa25.08■■□□□ 1.61
HLA-C-208ENST00000487245 WBP1LQ9NX94 342 aa25.08■■□□□ 1.61
HLA-C-208ENST00000487245 TDRKHQ9Y2W6 561 aaKnown RBP25.08■■□□□ 1.61
HLA-C-208ENST00000487245 SUV39H1O43463 412 aa25.07■■□□□ 1.6
HLA-C-208ENST00000487245 ADRB3P13945 408 aa25.07■■□□□ 1.6
HLA-C-208ENST00000487245 RPL3P39023 403 aaKnown RBP25.07■■□□□ 1.6
HLA-C-208ENST00000487245 CLCA4Q14CN2 919 aa25.07■■□□□ 1.6
HLA-C-208ENST00000487245 HKDC1Q2TB90 917 aa25.07■■□□□ 1.6
HLA-C-208ENST00000487245 P2RY8Q86VZ1 359 aa25.07■■□□□ 1.6
HLA-C-208ENST00000487245 HRASLS5Q96KN8 279 aa25.07■■□□□ 1.6
HLA-C-208ENST00000487245 DGKBQ9Y6T7 804 aa25.07■■□□□ 1.6
HLA-C-208ENST00000487245 GNG14A0A1W2PPG7 69 aa25.06■■□□□ 1.6
HLA-C-208ENST00000487245 TMEM229AB2RXF0 380 aa25.06■■□□□ 1.6
HLA-C-208ENST00000487245 AXIN1O15169 862 aa25.06■■□□□ 1.6
HLA-C-208ENST00000487245 PCDH7O60245 1069 aa25.06■■□□□ 1.6
HLA-C-208ENST00000487245 FAM20BO75063 409 aa25.06■■□□□ 1.6
HLA-C-208ENST00000487245 PAPLNO95428 1278 aa25.06■■□□□ 1.6
HLA-C-208ENST00000487245 GRK3P35626 688 aa25.06■■□□□ 1.6
HLA-C-208ENST00000487245 MAP2K4P45985 399 aa25.06■■□□□ 1.6
HLA-C-208ENST00000487245 SLC6A11P48066 632 aa25.06■■□□□ 1.6
HLA-C-208ENST00000487245 ST13P50502 369 aaKnown RBP25.06■■□□□ 1.6
HLA-C-208ENST00000487245 IL1RL1Q01638 556 aa25.06■■□□□ 1.6
HLA-C-208ENST00000487245 FADDQ13158 208 aa25.06■■□□□ 1.6
HLA-C-208ENST00000487245 NIPAL1Q6NVV3 410 aa25.06■■□□□ 1.6
HLA-C-208ENST00000487245 C11orf65Q8NCR3 313 aa25.06■■□□□ 1.6
HLA-C-208ENST00000487245 UBE2E3Q969T4 207 aa25.06■■□□□ 1.6
HLA-C-208ENST00000487245 DOHHQ9BU89 302 aa25.06■■□□□ 1.6
HLA-C-208ENST00000487245 ACOT13Q9NPJ3 140 aa25.06■■□□□ 1.6
HLA-C-208ENST00000487245 VIPR2P41587 438 aa25.06■■□□□ 1.6
HLA-C-208ENST00000487245 CD97P48960 835 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms