RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 PPP1R3AQ16821 1122 aa10.76□□□□□ -0.69
SCFD1-206ENST00000484733 CATSPEREQ5SY80 951 aa10.76□□□□□ -0.69
SCFD1-206ENST00000484733 FCRLBQ6BAA4 426 aa10.76□□□□□ -0.69
SCFD1-206ENST00000484733 SBSNQ6UWP8 590 aa10.76□□□□□ -0.69
SCFD1-206ENST00000484733 ARMC10Q8N2F6 343 aa10.76□□□□□ -0.69
SCFD1-206ENST00000484733 GPATCH11Q8N954 259 aa10.76□□□□□ -0.69
SCFD1-206ENST00000484733 TMEM178AQ8NBL3 297 aa10.76□□□□□ -0.69
SCFD1-206ENST00000484733 TRPV3Q8NET8 790 aa10.76□□□□□ -0.69
SCFD1-206ENST00000484733 OR5T3Q8NGG3 340 aa10.76□□□□□ -0.69
SCFD1-206ENST00000484733 UTP15Q8TED0 518 aaKnown RBP10.76□□□□□ -0.69
SCFD1-206ENST00000484733 TSLPQ969D9 159 aa10.76□□□□□ -0.69
SCFD1-206ENST00000484733 NEIL2Q969S2 332 aa10.76□□□□□ -0.69
SCFD1-206ENST00000484733 PYCR2Q96C36 320 aa10.76□□□□□ -0.69
SCFD1-206ENST00000484733 CCDC120Q96HB5 630 aa10.76□□□□□ -0.69
SCFD1-206ENST00000484733 GPR137Q96N19 417 aa10.76□□□□□ -0.69
SCFD1-206ENST00000484733 DYRK1BQ9Y463 629 aa10.76□□□□□ -0.69
SCFD1-206ENST00000484733 GABRR3A8MPY1 467 aa10.76□□□□□ -0.69
SCFD1-206ENST00000484733 CASP6P55212 293 aa10.76□□□□□ -0.69
SCFD1-206ENST00000484733 XKRXQ6PP77 449 aa10.76□□□□□ -0.69
SCFD1-206ENST00000484733 NXPE4Q6UWF7 544 aa10.76□□□□□ -0.69
SCFD1-206ENST00000484733 BNC2Q6ZN30 1099 aaPredicted RBP10.76□□□□□ -0.69
SCFD1-206ENST00000484733 THOC6Q86W42 341 aaKnown RBP10.76□□□□□ -0.69
SCFD1-206ENST00000484733 NKAPQ8N5F7 415 aaKnown RBP10.76□□□□□ -0.69
SCFD1-206ENST00000484733 AIF1LQ9BQI0 150 aa10.76□□□□□ -0.69
SCFD1-206ENST00000484733 WDR83Q9BRX9 315 aaKnown RBP10.76□□□□□ -0.69
SCFD1-206ENST00000484733 SLC17A6Q9P2U8 582 aa10.76□□□□□ -0.69
SCFD1-206ENST00000484733 IKZF3Q9UKT9 509 aa10.76□□□□□ -0.69
SCFD1-206ENST00000484733 ZNF860A6NHJ4 632 aa10.75□□□□□ -0.69
SCFD1-206ENST00000484733 DNAJB6O75190 326 aa10.75□□□□□ -0.69
SCFD1-206ENST00000484733 SP1P08047 785 aa10.75□□□□□ -0.69
SCFD1-206ENST00000484733 ZNF888P0CJ79 500 aaPredicted RBP10.75□□□□□ -0.69
SCFD1-206ENST00000484733 TNFRSF8P28908 595 aa10.75□□□□□ -0.69
SCFD1-206ENST00000484733 PMP22Q01453 160 aa10.75□□□□□ -0.69
SCFD1-206ENST00000484733 HYAL2Q12891 473 aa10.75□□□□□ -0.69
SCFD1-206ENST00000484733 SLC25A25Q6KCM7 469 aa10.75□□□□□ -0.69
SCFD1-206ENST00000484733 TRMT10BQ6PF06 316 aaKnown RBP10.75□□□□□ -0.69
SCFD1-206ENST00000484733 SIAH3Q8IW03 269 aa10.75□□□□□ -0.69
SCFD1-206ENST00000484733 CFAP36Q96G28 342 aa10.75□□□□□ -0.69
SCFD1-206ENST00000484733 SPNS1Q9H2V7 528 aa10.75□□□□□ -0.69
SCFD1-206ENST00000484733 CDCP1Q9H5V8 836 aa10.75□□□□□ -0.69
SCFD1-206ENST00000484733 PPANQ9NQ55 473 aaKnown RBP10.75□□□□□ -0.69
SCFD1-206ENST00000484733 CHMP2BQ9UQN3 213 aa10.75□□□□□ -0.69
SCFD1-206ENST00000484733 IGKV3D-11A0A0A0MRZ8 115 aa10.75□□□□□ -0.69
SCFD1-206ENST00000484733 TCRBV16S1A1N1A0A5B0 115 aa10.75□□□□□ -0.69
SCFD1-206ENST00000484733 ARHGAP10A1A4S6 786 aa10.75□□□□□ -0.69
SCFD1-206ENST00000484733 SAGE2PA6NJ88 616 aa10.75□□□□□ -0.69
SCFD1-206ENST00000484733 MAN1A2O60476 641 aa10.75□□□□□ -0.69
SCFD1-206ENST00000484733 SLC19A2O60779 497 aa10.75□□□□□ -0.69
SCFD1-206ENST00000484733 NEURL1O76050 574 aa10.75□□□□□ -0.69
SCFD1-206ENST00000484733 SERPINA6P08185 405 aa10.75□□□□□ -0.69
SCFD1-206ENST00000484733 RNH1P13489 461 aaKnown RBP10.75□□□□□ -0.69
SCFD1-206ENST00000484733 ZNF37AP17032 561 aaPredicted RBP10.75□□□□□ -0.69
SCFD1-206ENST00000484733 EEF1DP29692 281 aaKnown RBP10.75□□□□□ -0.69
SCFD1-206ENST00000484733 TRHRP34981 398 aaPredicted RBP10.75□□□□□ -0.69
SCFD1-206ENST00000484733 PTGER4P35408 488 aa10.75□□□□□ -0.69
SCFD1-206ENST00000484733 HNMTP50135 292 aa10.75□□□□□ -0.69
SCFD1-206ENST00000484733 ALDH6A1Q02252 535 aaKnown RBP10.75□□□□□ -0.69
SCFD1-206ENST00000484733 MGAT5Q09328 741 aa10.75□□□□□ -0.69
SCFD1-206ENST00000484733 ZNF630Q2M218 657 aaPredicted RBP10.75□□□□□ -0.69
SCFD1-206ENST00000484733 DEFB134Q4QY38 66 aa10.75□□□□□ -0.69
SCFD1-206ENST00000484733 MRGPRGQ86SM5 289 aa10.75□□□□□ -0.69
SCFD1-206ENST00000484733 RPS19BP1Q86WX3 136 aaKnown RBP10.75□□□□□ -0.69
SCFD1-206ENST00000484733 ANKRD53Q8N9V6 530 aa10.75□□□□□ -0.69
SCFD1-206ENST00000484733 FAM98AQ8NCA5 519 aaKnown RBP10.75□□□□□ -0.69
SCFD1-206ENST00000484733 NFAM1Q8NET5 270 aaPredicted RBP10.75□□□□□ -0.69
SCFD1-206ENST00000484733 CREB3L4Q8TEY5 395 aa10.75□□□□□ -0.69
SCFD1-206ENST00000484733 FRMD6Q96NE9 622 aa10.75□□□□□ -0.69
SCFD1-206ENST00000484733 RBCK1Q9BYM8 510 aa10.75□□□□□ -0.69
SCFD1-206ENST00000484733 POPDC3Q9HBV1 291 aa10.75□□□□□ -0.69
SCFD1-206ENST00000484733 CHST11Q9NPF2 352 aa10.75□□□□□ -0.69
SCFD1-206ENST00000484733 PRDM9Q9NQV7 894 aa10.75□□□□□ -0.69
SCFD1-206ENST00000484733 MOCS1Q9NZB8 636 aa10.75□□□□□ -0.69
SCFD1-206ENST00000484733 OARD1Q9Y530 152 aa10.75□□□□□ -0.69
SCFD1-206ENST00000484733 KCNE2Q9Y6J6 123 aa10.75□□□□□ -0.69
SCFD1-206ENST00000484733 NDC80O14777 642 aa10.74□□□□□ -0.69
SCFD1-206ENST00000484733 PRMT3O60678 531 aa10.74□□□□□ -0.69
SCFD1-206ENST00000484733 CDC123O75794 336 aaPredicted RBP10.74□□□□□ -0.69
SCFD1-206ENST00000484733 WISP2O76076 250 aa10.74□□□□□ -0.69
SCFD1-206ENST00000484733 GUCA1CO95843 209 aa10.74□□□□□ -0.69
SCFD1-206ENST00000484733 GSTM2P28161 218 aa10.74□□□□□ -0.69
SCFD1-206ENST00000484733 ARL4CP56559 192 aa10.74□□□□□ -0.69
SCFD1-206ENST00000484733 MLF1P58340 268 aa10.74□□□□□ -0.69
SCFD1-206ENST00000484733 SPINK14Q6IE38 97 aa10.74□□□□□ -0.69
SCFD1-206ENST00000484733 ZC3HC1Q86WB0 502 aaKnown RBP10.74□□□□□ -0.69
SCFD1-206ENST00000484733 SEC16BQ96JE7 1060 aa10.74□□□□□ -0.69
SCFD1-206ENST00000484733 PTCHD1Q96NR3 888 aa10.74□□□□□ -0.69
SCFD1-206ENST00000484733 HES7Q9BYE0 225 aa10.74□□□□□ -0.69
SCFD1-206ENST00000484733 NT5DC2Q9H857 520 aa10.74□□□□□ -0.69
SCFD1-206ENST00000484733 NSMCE4AQ9NXX6 385 aa10.74□□□□□ -0.69
SCFD1-206ENST00000484733 MMACHCQ9Y4U1 282 aa10.74□□□□□ -0.69
SCFD1-206ENST00000484733 DIDO1Q9BTC0 2240 aaKnown RBP10.74□□□□□ -0.69
SCFD1-206ENST00000484733 E7ESA3 106 aa10.74□□□□□ -0.69
SCFD1-206ENST00000484733 B4GALT2O60909 372 aa10.74□□□□□ -0.69
SCFD1-206ENST00000484733 SERPIND1P05546 499 aa10.74□□□□□ -0.69
SCFD1-206ENST00000484733 PRF1P14222 555 aa10.74□□□□□ -0.69
SCFD1-206ENST00000484733 TPP2P29144 1249 aaPredicted RBP10.74□□□□□ -0.69
SCFD1-206ENST00000484733 PGGT1BP53609 377 aa10.74□□□□□ -0.69
SCFD1-206ENST00000484733 NAA30Q147X3 362 aaPredicted RBP10.74□□□□□ -0.69
SCFD1-206ENST00000484733 C3AR1Q16581 482 aa10.74□□□□□ -0.69
SCFD1-206ENST00000484733 SPPL2CQ8IUH8 684 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms