RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 AFAP1L2Q8N4X5 818 aa11.6□□□□□ -0.55
MSH5-216ENST00000484309 CEP112Q8N8E3 955 aa11.6□□□□□ -0.55
MSH5-216ENST00000484309 PDPRQ8NCN5 879 aa11.6□□□□□ -0.55
MSH5-216ENST00000484309 LRRN4CLQ8ND94 238 aa11.6□□□□□ -0.55
MSH5-216ENST00000484309 CPT1CQ8TCG5 803 aa11.6□□□□□ -0.55
MSH5-216ENST00000484309 UTP15Q8TED0 518 aaKnown RBP11.6□□□□□ -0.55
MSH5-216ENST00000484309 MIB2Q96AX9 1013 aa11.6□□□□□ -0.55
MSH5-216ENST00000484309 ATOH8Q96SQ7 321 aa11.6□□□□□ -0.55
MSH5-216ENST00000484309 RHOXF2Q9BQY4 288 aa11.6□□□□□ -0.55
MSH5-216ENST00000484309 FAM129AQ9BZQ8 928 aa11.6□□□□□ -0.55
MSH5-216ENST00000484309 LHPPQ9H008 270 aa11.6□□□□□ -0.55
MSH5-216ENST00000484309 CNOT10Q9H9A5 744 aaKnown RBP11.6□□□□□ -0.55
MSH5-216ENST00000484309 NMRAL1Q9HBL8 299 aa11.6□□□□□ -0.55
MSH5-216ENST00000484309 SLAMF7Q9NQ25 335 aa11.6□□□□□ -0.55
MSH5-216ENST00000484309 NUDT4Q9NZJ9 180 aa11.6□□□□□ -0.55
MSH5-216ENST00000484309 NFU1Q9UMS0 254 aa11.6□□□□□ -0.55
MSH5-216ENST00000484309 ACOT9Q9Y305 439 aa11.6□□□□□ -0.55
MSH5-216ENST00000484309 ESPL1Q14674 2120 aa11.6□□□□□ -0.55
MSH5-216ENST00000484309 A0A087X1B8 175 aa11.59□□□□□ -0.55
MSH5-216ENST00000484309 A0A096LPK6 155 aa11.59□□□□□ -0.55
MSH5-216ENST00000484309 POC1B-GALNT4F8VUJ3 575 aa11.59□□□□□ -0.55
MSH5-216ENST00000484309 CHST10O43529 356 aa11.59□□□□□ -0.55
MSH5-216ENST00000484309 KERAO60938 352 aa11.59□□□□□ -0.55
MSH5-216ENST00000484309 H2AFYO75367 372 aaKnown RBP11.59□□□□□ -0.55
MSH5-216ENST00000484309 IPO13O94829 963 aaKnown RBP11.59□□□□□ -0.55
MSH5-216ENST00000484309 SEC24DO94855 1032 aaPredicted RBP11.59□□□□□ -0.55
MSH5-216ENST00000484309 UQCRHP07919 91 aa11.59□□□□□ -0.55
MSH5-216ENST00000484309 GGT5P36269 586 aa11.59□□□□□ -0.55
MSH5-216ENST00000484309 SERPINB8P50452 374 aa11.59□□□□□ -0.55
MSH5-216ENST00000484309 PDK4Q16654 411 aa11.59□□□□□ -0.55
MSH5-216ENST00000484309 PLEKHN1Q494U1 663 aaPredicted RBP11.59□□□□□ -0.55
MSH5-216ENST00000484309 GLE1Q53GS7 698 aaKnown RBP11.59□□□□□ -0.55
MSH5-216ENST00000484309 XKR6Q5GH73 641 aa11.59□□□□□ -0.55
MSH5-216ENST00000484309 AGAP7PQ5VUJ5 663 aa11.59□□□□□ -0.55
MSH5-216ENST00000484309 TMEM205Q6UW68 189 aa11.59□□□□□ -0.55
MSH5-216ENST00000484309 TMIGD1Q6UXZ0 262 aa11.59□□□□□ -0.55
MSH5-216ENST00000484309 CEP128Q6ZU80 1094 aa11.59□□□□□ -0.55
MSH5-216ENST00000484309 ABHD13Q7L211 337 aa11.59□□□□□ -0.55
MSH5-216ENST00000484309 KBTBD2Q8IY47 623 aa11.59□□□□□ -0.55
MSH5-216ENST00000484309 ZADH2Q8N4Q0 377 aa11.59□□□□□ -0.55
MSH5-216ENST00000484309 SIRT6Q8N6T7 355 aa11.59□□□□□ -0.55
MSH5-216ENST00000484309 TRPV3Q8NET8 790 aa11.59□□□□□ -0.55
MSH5-216ENST00000484309 STAG3L4Q8TBR4 150 aa11.59□□□□□ -0.55
MSH5-216ENST00000484309 BRIX1Q8TDN6 353 aaKnown RBP11.59□□□□□ -0.55
MSH5-216ENST00000484309 CREB3L4Q8TEY5 395 aa11.59□□□□□ -0.55
MSH5-216ENST00000484309 METTL21AQ8WXB1 218 aa11.59□□□□□ -0.55
MSH5-216ENST00000484309 TSLPQ969D9 159 aa11.59□□□□□ -0.55
MSH5-216ENST00000484309 PNPLA2Q96AD5 504 aa11.59□□□□□ -0.55
MSH5-216ENST00000484309 CNDP1Q96KN2 507 aa11.59□□□□□ -0.55
MSH5-216ENST00000484309 MAGEB10Q96LZ2 347 aaPredicted RBP11.59□□□□□ -0.55
MSH5-216ENST00000484309 AGAP4Q96P64 663 aa11.59□□□□□ -0.55
MSH5-216ENST00000484309 PAFAH2Q99487 392 aa11.59□□□□□ -0.55
MSH5-216ENST00000484309 SLC6A16Q9GZN6 736 aa11.59□□□□□ -0.55
MSH5-216ENST00000484309 ILKAPQ9H0C8 392 aaPredicted RBP11.59□□□□□ -0.55
MSH5-216ENST00000484309 VPS11Q9H270 941 aa11.59□□□□□ -0.55
MSH5-216ENST00000484309 RHBGQ9H310 441 aa11.59□□□□□ -0.55
MSH5-216ENST00000484309 PRM3Q9NNZ6 103 aa11.59□□□□□ -0.55
MSH5-216ENST00000484309 RIC8BQ9NVN3 520 aa11.59□□□□□ -0.55
MSH5-216ENST00000484309 PTGFRNQ9P2B2 879 aa11.59□□□□□ -0.55
MSH5-216ENST00000484309 PTBP2Q9UKA9 531 aaKnown RBP11.59□□□□□ -0.55
MSH5-216ENST00000484309 LOC102723996A0A087X1L8 192 aa11.58□□□□□ -0.56
MSH5-216ENST00000484309 B4GALT2O60909 372 aa11.58□□□□□ -0.56
MSH5-216ENST00000484309 F10P00742 488 aa11.58□□□□□ -0.56
MSH5-216ENST00000484309 ALDOAP04075 364 aaKnown RBP11.58□□□□□ -0.56
MSH5-216ENST00000484309 INHBAP08476 426 aa11.58□□□□□ -0.56
MSH5-216ENST00000484309 PRR35P0CG20 571 aa11.58□□□□□ -0.56
MSH5-216ENST00000484309 ITGAMP11215 1152 aa11.58□□□□□ -0.56
MSH5-216ENST00000484309 EPORP19235 508 aa11.58□□□□□ -0.56
MSH5-216ENST00000484309 CD22P20273 847 aa11.58□□□□□ -0.56
MSH5-216ENST00000484309 TYK2P29597 1187 aa11.58□□□□□ -0.56
MSH5-216ENST00000484309 HNRNPH1P31943 449 aaKnown RBP11.58□□□□□ -0.56
MSH5-216ENST00000484309 UQCRFS1P47985 274 aa11.58□□□□□ -0.56
MSH5-216ENST00000484309 CHIT1Q13231 466 aa11.58□□□□□ -0.56
MSH5-216ENST00000484309 DOC2AQ14183 400 aa11.58□□□□□ -0.56
MSH5-216ENST00000484309 INPP5JQ15735 1006 aaPredicted RBP11.58□□□□□ -0.56
MSH5-216ENST00000484309 CDKL4Q5MAI5 379 aa11.58□□□□□ -0.56
MSH5-216ENST00000484309 IGFL3Q6UXB1 125 aa11.58□□□□□ -0.56
MSH5-216ENST00000484309 VN1R5Q7Z5H4 357 aa11.58□□□□□ -0.56
MSH5-216ENST00000484309 CPEB2Q7Z5Q1 589 aaKnown RBP11.58□□□□□ -0.56
MSH5-216ENST00000484309 ANKRD37Q7Z713 158 aa11.58□□□□□ -0.56
MSH5-216ENST00000484309 ZGRF1Q86YA3 2104 aa11.58□□□□□ -0.56
MSH5-216ENST00000484309 HPS6Q86YV9 775 aa11.58□□□□□ -0.56
MSH5-216ENST00000484309 RELL1Q8IUW5 271 aa11.58□□□□□ -0.56
MSH5-216ENST00000484309 GSPT2Q8IYD1 628 aaKnown RBP11.58□□□□□ -0.56
MSH5-216ENST00000484309 KRT78Q8N1N4 520 aa11.58□□□□□ -0.56
MSH5-216ENST00000484309 PLD6Q8N2A8 252 aaKnown RBP11.58□□□□□ -0.56
MSH5-216ENST00000484309 EFCAB3Q8N7B9 438 aa11.58□□□□□ -0.56
MSH5-216ENST00000484309 SLC44A1Q8WWI5 657 aa11.58□□□□□ -0.56
MSH5-216ENST00000484309 TM9SF4Q92544 642 aa11.58□□□□□ -0.56
MSH5-216ENST00000484309 C19orf60Q96EN9 201 aa11.58□□□□□ -0.56
MSH5-216ENST00000484309 CD244Q9BZW8 370 aa11.58□□□□□ -0.56
MSH5-216ENST00000484309 ZNF700Q9H0M5 742 aa11.58□□□□□ -0.56
MSH5-216ENST00000484309 LANCL2Q9NS86 450 aa11.58□□□□□ -0.56
MSH5-216ENST00000484309 ZNF358Q9NW07 568 aa11.58□□□□□ -0.56
MSH5-216ENST00000484309 GPRC5BQ9NZH0 403 aa11.58□□□□□ -0.56
MSH5-216ENST00000484309 B3GNT3Q9Y2A9 372 aa11.58□□□□□ -0.56
MSH5-216ENST00000484309 URADA6NGE7 173 aa11.57□□□□□ -0.56
MSH5-216ENST00000484309 LRRC14BA6NHZ5 514 aa11.57□□□□□ -0.56
MSH5-216ENST00000484309 ERI3O43414 337 aaKnown RBP11.57□□□□□ -0.56
MSH5-216ENST00000484309 KLHL41O60662 606 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms