RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 RAD1O60671 282 aa16.95■□□□□ 0.3
CPNE1-224ENST00000483359 PDYNP01213 254 aa16.95■□□□□ 0.3
CPNE1-224ENST00000483359 GSTM2P28161 218 aa16.95■□□□□ 0.3
CPNE1-224ENST00000483359 PLA2G16P53816 162 aa16.95■□□□□ 0.3
CPNE1-224ENST00000483359 PHEXP78562 749 aa16.95■□□□□ 0.3
CPNE1-224ENST00000483359 BST1Q10588 318 aa16.95■□□□□ 0.3
CPNE1-224ENST00000483359 NDUFA9Q16795 377 aa16.95■□□□□ 0.3
CPNE1-224ENST00000483359 SH2D4BQ5SQS7 431 aa16.95■□□□□ 0.3
CPNE1-224ENST00000483359 LCN10Q6JVE6 187 aa16.95■□□□□ 0.3
CPNE1-224ENST00000483359 UNQ6494/PRO21346Q6UXR6 183 aa16.95■□□□□ 0.3
CPNE1-224ENST00000483359 NLGN4XQ8N0W4 816 aa16.95■□□□□ 0.3
CPNE1-224ENST00000483359 NLGN4YQ8NFZ3 816 aaPredicted RBP16.95■□□□□ 0.3
CPNE1-224ENST00000483359 OR9A4Q8NGU2 314 aa16.95■□□□□ 0.3
CPNE1-224ENST00000483359 MAGEB10Q96LZ2 347 aaPredicted RBP16.95■□□□□ 0.3
CPNE1-224ENST00000483359 F2RL3Q96RI0 385 aa16.95■□□□□ 0.3
CPNE1-224ENST00000483359 MS4A8Q9BY19 250 aa16.95■□□□□ 0.3
CPNE1-224ENST00000483359 REXO4Q9GZR2 422 aaKnown RBP16.95■□□□□ 0.3
CPNE1-224ENST00000483359 EML4Q9HC35 981 aaKnown RBP16.95■□□□□ 0.3
CPNE1-224ENST00000483359 INTS9Q9NV88 658 aaKnown RBP16.95■□□□□ 0.3
CPNE1-224ENST00000483359 ZFHX4Q86UP3 3567 aa16.95■□□□□ 0.3
CPNE1-224ENST00000483359 LRIT2A6NDA9 550 aa16.95■□□□□ 0.3
CPNE1-224ENST00000483359 DSCR3O14972 297 aa16.95■□□□□ 0.3
CPNE1-224ENST00000483359 ETHE1O95571 254 aa16.95■□□□□ 0.3
CPNE1-224ENST00000483359 ENO1P06733 434 aaKnown RBP16.95■□□□□ 0.3
CPNE1-224ENST00000483359 HBQ1P09105 142 aa16.95■□□□□ 0.3
CPNE1-224ENST00000483359 CD82P27701 267 aa16.95■□□□□ 0.3
CPNE1-224ENST00000483359 SLC1A6P48664 564 aa16.95■□□□□ 0.3
CPNE1-224ENST00000483359 PCBP4P57723 403 aaKnown RBP16.95■□□□□ 0.3
CPNE1-224ENST00000483359 ABCE1P61221 599 aaKnown RBP16.95■□□□□ 0.3
CPNE1-224ENST00000483359 STX3Q13277 289 aa16.95■□□□□ 0.3
CPNE1-224ENST00000483359 DEFB134Q4QY38 66 aa16.95■□□□□ 0.3
CPNE1-224ENST00000483359 GARNL3Q5VVW2 1013 aa16.95■□□□□ 0.3
CPNE1-224ENST00000483359 DSELQ8IZU8 1212 aa16.95■□□□□ 0.3
CPNE1-224ENST00000483359 MMABQ96EY8 250 aaPredicted RBP16.95■□□□□ 0.3
CPNE1-224ENST00000483359 GBP5Q96PP8 586 aa16.95■□□□□ 0.3
CPNE1-224ENST00000483359 C17orf62Q9BQA9 187 aa16.95■□□□□ 0.3
CPNE1-224ENST00000483359 SLC29A3Q9BZD2 475 aa16.95■□□□□ 0.3
CPNE1-224ENST00000483359 LHX9Q9NQ69 397 aa16.95■□□□□ 0.3
CPNE1-224ENST00000483359 ENAMQ9NRM1 1142 aa16.95■□□□□ 0.3
CPNE1-224ENST00000483359 SCN3AQ9NY46 2000 aa16.95■□□□□ 0.3
CPNE1-224ENST00000483359 SGK494L7N484 410 aa16.94■□□□□ 0.3
CPNE1-224ENST00000483359 MANBAO00462 879 aa16.94■□□□□ 0.3
CPNE1-224ENST00000483359 FOXS1O43638 330 aa16.94■□□□□ 0.3
CPNE1-224ENST00000483359 KRT6AP02538 564 aa16.94■□□□□ 0.3
CPNE1-224ENST00000483359 KRT6BP04259 564 aa16.94■□□□□ 0.3
CPNE1-224ENST00000483359 KLK3P07288 261 aaPredicted RBP16.94■□□□□ 0.3
CPNE1-224ENST00000483359 ITGAXP20702 1163 aa16.94■□□□□ 0.3
CPNE1-224ENST00000483359 SERPINB5P36952 375 aa16.94■□□□□ 0.3
CPNE1-224ENST00000483359 PIK3CBP42338 1070 aa16.94■□□□□ 0.3
CPNE1-224ENST00000483359 KRT6CP48668 564 aa16.94■□□□□ 0.3
CPNE1-224ENST00000483359 STXBP1P61764 594 aaKnown RBP16.94■□□□□ 0.3
CPNE1-224ENST00000483359 ABHD18Q0P651 414 aa16.94■□□□□ 0.3
CPNE1-224ENST00000483359 ABRAXAS2Q15018 415 aa16.94■□□□□ 0.3
CPNE1-224ENST00000483359 YOD1Q5VVQ6 348 aaPredicted RBP16.94■□□□□ 0.3
CPNE1-224ENST00000483359 ABHD13Q7L211 337 aa16.94■□□□□ 0.3
CPNE1-224ENST00000483359 PDSS2Q86YH6 399 aa16.94■□□□□ 0.3
CPNE1-224ENST00000483359 IL22RA1Q8N6P7 574 aa16.94■□□□□ 0.3
CPNE1-224ENST00000483359 UTP15Q8TED0 518 aaKnown RBP16.94■□□□□ 0.3
CPNE1-224ENST00000483359 FGF11Q92914 225 aa16.94■□□□□ 0.3
CPNE1-224ENST00000483359 MS4A6EQ96DS6 147 aa16.94■□□□□ 0.3
CPNE1-224ENST00000483359 SEC16BQ96JE7 1060 aa16.94■□□□□ 0.3
CPNE1-224ENST00000483359 ANKHQ9HCJ1 492 aa16.94■□□□□ 0.3
CPNE1-224ENST00000483359 NAALAD2Q9Y3Q0 740 aa16.94■□□□□ 0.3
CPNE1-224ENST00000483359 AHCTF1Q8WYP5 2266 aa16.94■□□□□ 0.3
CPNE1-224ENST00000483359 CHD8Q9HCK8 2581 aa16.94■□□□□ 0.3
CPNE1-224ENST00000483359 TMEM114B3SHH9 223 aa16.93■□□□□ 0.3
CPNE1-224ENST00000483359 RTCAO00442 366 aaKnown RBP16.93■□□□□ 0.3
CPNE1-224ENST00000483359 AZIN1O14977 448 aa16.93■□□□□ 0.3
CPNE1-224ENST00000483359 ULK1O75385 1050 aa16.93■□□□□ 0.3
CPNE1-224ENST00000483359 CCNYL3P0C7X3 344 aa16.93■□□□□ 0.3
CPNE1-224ENST00000483359 LIPCP11150 499 aa16.93■□□□□ 0.3
CPNE1-224ENST00000483359 ALOX12P18054 663 aa16.93■□□□□ 0.3
CPNE1-224ENST00000483359 GRK2P25098 689 aa16.93■□□□□ 0.3
CPNE1-224ENST00000483359 SERPINB1P30740 379 aa16.93■□□□□ 0.3
CPNE1-224ENST00000483359 MANEAQ5SRI9 462 aa16.93■□□□□ 0.3
CPNE1-224ENST00000483359 ZNF385CQ66K41 422 aaPredicted RBP16.93■□□□□ 0.3
CPNE1-224ENST00000483359 CACNA2D3Q8IZS8 1091 aa16.93■□□□□ 0.3
CPNE1-224ENST00000483359 SHISA5Q8N114 240 aa16.93■□□□□ 0.3
CPNE1-224ENST00000483359 ESX1Q8N693 406 aa16.93■□□□□ 0.3
CPNE1-224ENST00000483359 ZNF781Q8N8C0 355 aa16.93■□□□□ 0.3
CPNE1-224ENST00000483359 PROKR1Q8TCW9 393 aa16.93■□□□□ 0.3
CPNE1-224ENST00000483359 CMTM7Q96FZ5 175 aa16.93■□□□□ 0.3
CPNE1-224ENST00000483359 CHST8Q9H2A9 424 aa16.93■□□□□ 0.3
CPNE1-224ENST00000483359 MANSC1Q9H8J5 431 aa16.93■□□□□ 0.3
CPNE1-224ENST00000483359 ZDHHC2Q9UIJ5 367 aa16.93■□□□□ 0.3
CPNE1-224ENST00000483359 ACSL6Q9UKU0 697 aa16.93■□□□□ 0.3
CPNE1-224ENST00000483359 PTGDR2Q9Y5Y4 395 aa16.93■□□□□ 0.3
CPNE1-224ENST00000483359 IGF2RP11717 2491 aa16.93■□□□□ 0.3
CPNE1-224ENST00000483359 URADA6NGE7 173 aa16.93■□□□□ 0.3
CPNE1-224ENST00000483359 RDH16O75452 317 aa16.93■□□□□ 0.3
CPNE1-224ENST00000483359 OLR1P78380 273 aa16.93■□□□□ 0.3
CPNE1-224ENST00000483359 DCDP81605 110 aaKnown RBP16.93■□□□□ 0.3
CPNE1-224ENST00000483359 MAT1AQ00266 395 aaKnown RBP16.93■□□□□ 0.3
CPNE1-224ENST00000483359 GALNT1Q10472 559 aaPredicted RBP16.93■□□□□ 0.3
CPNE1-224ENST00000483359 SYT16Q17RD7 645 aa16.93■□□□□ 0.3
CPNE1-224ENST00000483359 ARHGAP40Q5TG30 622 aa16.93■□□□□ 0.3
CPNE1-224ENST00000483359 KHDRBS2Q5VWX1 349 aaKnown RBP16.93■□□□□ 0.3
CPNE1-224ENST00000483359 TRIM40Q6P9F5 258 aa16.93■□□□□ 0.3
CPNE1-224ENST00000483359 DTX1Q86Y01 620 aa16.93■□□□□ 0.3
CPNE1-224ENST00000483359 NKD1Q969G9 470 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms