RNA–Protein interactions for RNA: ENST00000483216.1

USP40-213, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 4

Gene USP40, Length 641 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-213ENST00000483216 OR4K1Q8NGD4 311 aa5.16□□□□□ -1.58
USP40-213ENST00000483216 OR10G8Q8NGN5 311 aa5.16□□□□□ -1.58
USP40-213ENST00000483216 HDAC11Q96DB2 347 aa5.16□□□□□ -1.58
USP40-213ENST00000483216 DTNBP1Q96EV8 351 aa5.16□□□□□ -1.58
USP40-213ENST00000483216 TXLNGYQ9BZA5 131 aa5.16□□□□□ -1.58
USP40-213ENST00000483216 Q9H8V8 135 aa5.16□□□□□ -1.58
USP40-213ENST00000483216 CDH20Q9HBT6 801 aa5.16□□□□□ -1.58
USP40-213ENST00000483216 ZNF446Q9NWS9 450 aa5.16□□□□□ -1.58
USP40-213ENST00000483216 RNF14Q9UBS8 474 aa5.16□□□□□ -1.58
USP40-213ENST00000483216 EPHA6Q9UF33 1036 aa5.16□□□□□ -1.58
USP40-213ENST00000483216 WDR83OSQ9Y284 106 aa5.16□□□□□ -1.58
USP40-213ENST00000483216 RNF215Q9Y6U7 377 aa5.16□□□□□ -1.58
USP40-213ENST00000483216 IGSF1Q8N6C5 1336 aa5.16□□□□□ -1.58
USP40-213ENST00000483216 KDRP35968 1356 aa5.16□□□□□ -1.58
USP40-213ENST00000483216 CRB1P82279 1406 aa5.15□□□□□ -1.58
USP40-213ENST00000483216 STRCP1A6NGW2 1772 aa5.15□□□□□ -1.58
USP40-213ENST00000483216 A0A1B0GU03 582 aa5.15□□□□□ -1.59
USP40-213ENST00000483216 CLDN4O14493 209 aa5.15□□□□□ -1.59
USP40-213ENST00000483216 LIN7AO14910 233 aaPredicted RBP5.15□□□□□ -1.59
USP40-213ENST00000483216 EPHB6O15197 1021 aa5.15□□□□□ -1.59
USP40-213ENST00000483216 SHOX2O60902 331 aaPredicted RBP5.15□□□□□ -1.59
USP40-213ENST00000483216 DDHD2O94830 711 aa5.15□□□□□ -1.59
USP40-213ENST00000483216 CELF2O95319 508 aaKnown RBP5.15□□□□□ -1.59
USP40-213ENST00000483216 VTNP04004 478 aa5.15□□□□□ -1.59
USP40-213ENST00000483216 CSN3P07498 182 aa5.15□□□□□ -1.59
USP40-213ENST00000483216 HOXB7P09629 217 aa5.15□□□□□ -1.59
USP40-213ENST00000483216 GP1BBP13224 206 aa5.15□□□□□ -1.59
USP40-213ENST00000483216 CPT2P23786 658 aa5.15□□□□□ -1.59
USP40-213ENST00000483216 EEF1B2P24534 225 aaKnown RBP5.15□□□□□ -1.59
USP40-213ENST00000483216 KRT83P78385 493 aa5.15□□□□□ -1.59
USP40-213ENST00000483216 RBPJQ06330 500 aa5.15□□□□□ -1.59
USP40-213ENST00000483216 CAMK4Q16566 473 aa5.15□□□□□ -1.59
USP40-213ENST00000483216 LCN1P1Q5VSP4 162 aa5.15□□□□□ -1.59
USP40-213ENST00000483216 CST9LP1Q5W188 147 aa5.15□□□□□ -1.59
USP40-213ENST00000483216 KRT80Q6KB66 452 aa5.15□□□□□ -1.59
USP40-213ENST00000483216 SLC30A6Q6NXT4 461 aa5.15□□□□□ -1.59
USP40-213ENST00000483216 SLC25A47Q6Q0C1 308 aa5.15□□□□□ -1.59
USP40-213ENST00000483216 TMEM207Q6UWW9 146 aa5.15□□□□□ -1.59
USP40-213ENST00000483216 EGFL6Q8IUX8 553 aa5.15□□□□□ -1.59
USP40-213ENST00000483216 LGI2Q8N0V4 545 aa5.15□□□□□ -1.59
USP40-213ENST00000483216 CNPY4Q8N129 248 aa5.15□□□□□ -1.59
USP40-213ENST00000483216 NDUFAF2Q8N183 169 aa5.15□□□□□ -1.59
USP40-213ENST00000483216 ZNF485Q8NCK3 441 aa5.15□□□□□ -1.59
USP40-213ENST00000483216 CCDC12Q8WUD4 166 aaPredicted RBP5.15□□□□□ -1.59
USP40-213ENST00000483216 CCDC47Q96A33 483 aaKnown RBP5.15□□□□□ -1.59
USP40-213ENST00000483216 C10orf90Q96M02 699 aa5.15□□□□□ -1.59
USP40-213ENST00000483216 GDAP1L1Q96MZ0 367 aa5.15□□□□□ -1.59
USP40-213ENST00000483216 SYT15Q9BQS2 421 aa5.15□□□□□ -1.59
USP40-213ENST00000483216 MCRIP2Q9BUT9 160 aaKnown RBP5.15□□□□□ -1.59
USP40-213ENST00000483216 CARD6Q9BX69 1037 aa5.15□□□□□ -1.59
USP40-213ENST00000483216 CLEC7AQ9BXN2 247 aa5.15□□□□□ -1.59
USP40-213ENST00000483216 CAPS2Q9BXY5 557 aa5.15□□□□□ -1.59
USP40-213ENST00000483216 TSGA10Q9BZW7 698 aa5.15□□□□□ -1.59
USP40-213ENST00000483216 EGLN1Q9GZT9 426 aa5.15□□□□□ -1.59
USP40-213ENST00000483216 THAP2Q9H0W7 228 aa5.15□□□□□ -1.59
USP40-213ENST00000483216 TLE6Q9H808 572 aa5.15□□□□□ -1.59
USP40-213ENST00000483216 WDR35Q9P2L0 1181 aa5.15□□□□□ -1.59
USP40-213ENST00000483216 MAN1B1Q9UKM7 699 aa5.15□□□□□ -1.59
USP40-213ENST00000483216 PPP2R2CQ9Y2T4 447 aa5.15□□□□□ -1.59
USP40-213ENST00000483216 LRRC37A3O60309 1634 aa5.15□□□□□ -1.59
USP40-213ENST00000483216 DCCP43146 1447 aa5.14□□□□□ -1.59
USP40-213ENST00000483216 ATP10DQ9P241 1426 aa5.14□□□□□ -1.59
USP40-213ENST00000483216 NWD1Q149M9 1564 aa5.14□□□□□ -1.59
USP40-213ENST00000483216 NDUFAF8A1L188 74 aa5.14□□□□□ -1.59
USP40-213ENST00000483216 HSF2BPO75031 334 aa5.14□□□□□ -1.59
USP40-213ENST00000483216 FYNP06241 537 aa5.14□□□□□ -1.59
USP40-213ENST00000483216 EPB41P11171 864 aaKnown RBP5.14□□□□□ -1.59
USP40-213ENST00000483216 DARSP14868 501 aaKnown RBP5.14□□□□□ -1.59
USP40-213ENST00000483216 EPCAMP16422 314 aa5.14□□□□□ -1.59
USP40-213ENST00000483216 CYP11B2P19099 503 aa5.14□□□□□ -1.59
USP40-213ENST00000483216 CMA1P23946 247 aa5.14□□□□□ -1.59
USP40-213ENST00000483216 CASP8Q14790 479 aa5.14□□□□□ -1.59
USP40-213ENST00000483216 RASA2Q15283 850 aa5.14□□□□□ -1.59
USP40-213ENST00000483216 SNCBQ16143 134 aa5.14□□□□□ -1.59
USP40-213ENST00000483216 BEND6Q5SZJ8 279 aaPredicted RBP5.14□□□□□ -1.59
USP40-213ENST00000483216 LCE1FQ5T754 118 aa5.14□□□□□ -1.59
USP40-213ENST00000483216 UGT3A1Q6NUS8 523 aa5.14□□□□□ -1.59
USP40-213ENST00000483216 EMBQ6PCB8 327 aa5.14□□□□□ -1.59
USP40-213ENST00000483216 FIP1L1Q6UN15 594 aaKnown RBP5.14□□□□□ -1.59
USP40-213ENST00000483216 MCM10Q7L590 875 aa5.14□□□□□ -1.59
USP40-213ENST00000483216 HOGA1Q86XE5 327 aa5.14□□□□□ -1.59
USP40-213ENST00000483216 FBXL16Q8N461 479 aa5.14□□□□□ -1.59
USP40-213ENST00000483216 TEX9Q8N6V9 391 aa5.14□□□□□ -1.59
USP40-213ENST00000483216 GBP7Q8N8V2 638 aaPredicted RBP5.14□□□□□ -1.59
USP40-213ENST00000483216 EIF1ADQ8N9N8 165 aaKnown RBP5.14□□□□□ -1.59
USP40-213ENST00000483216 MAPK1IP1LQ8NDC0 245 aa5.14□□□□□ -1.59
USP40-213ENST00000483216 CNNM3Q8NE01 707 aa5.14□□□□□ -1.59
USP40-213ENST00000483216 OR1L3Q8NH93 324 aa5.14□□□□□ -1.59
USP40-213ENST00000483216 ROBO4Q8WZ75 1007 aa5.14□□□□□ -1.59
USP40-213ENST00000483216 AZIN2Q96A70 460 aa5.14□□□□□ -1.59
USP40-213ENST00000483216 MOCOSQ96EN8 888 aa5.14□□□□□ -1.59
USP40-213ENST00000483216 FAM71F1Q96KD3 344 aaPredicted RBP5.14□□□□□ -1.59
USP40-213ENST00000483216 KRT12Q99456 494 aa5.14□□□□□ -1.59
USP40-213ENST00000483216 NAPGQ99747 312 aaPredicted RBP5.14□□□□□ -1.59
USP40-213ENST00000483216 TEX13AQ9BXU3 409 aaPredicted RBP5.14□□□□□ -1.59
USP40-213ENST00000483216 LSG1Q9H089 658 aaKnown RBP5.14□□□□□ -1.59
USP40-213ENST00000483216 FAM49AQ9H0Q0 323 aaPredicted RBP5.14□□□□□ -1.59
USP40-213ENST00000483216 CHST11Q9NPF2 352 aa5.14□□□□□ -1.59
USP40-213ENST00000483216 CWC25Q9NXE8 425 aaPredicted RBP5.14□□□□□ -1.59
USP40-213ENST00000483216 ERAP1Q9NZ08 941 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms