RNA–Protein interactions for RNA: ENST00000482632.5

SPTLC1-206, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 837 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-206ENST00000482632 UBTD2Q8WUN7 234 aa9.49□□□□□ -0.89
SPTLC1-206ENST00000482632 SNRNP27Q8WVK2 155 aaKnown RBP9.49□□□□□ -0.89
SPTLC1-206ENST00000482632 APOBEC4Q8WW27 367 aaKnown RBP9.49□□□□□ -0.89
SPTLC1-206ENST00000482632 TTC9Q92623 222 aa9.49□□□□□ -0.89
SPTLC1-206ENST00000482632 ISL2Q96A47 359 aa9.49□□□□□ -0.89
SPTLC1-206ENST00000482632 FKBP10Q96AY3 582 aa9.49□□□□□ -0.89
SPTLC1-206ENST00000482632 ZBTB9Q96C00 473 aa9.49□□□□□ -0.89
SPTLC1-206ENST00000482632 PTCD3Q96EY7 689 aaKnown RBP9.49□□□□□ -0.89
SPTLC1-206ENST00000482632 MRPL57Q9BQC6 102 aaKnown RBP9.49□□□□□ -0.89
SPTLC1-206ENST00000482632 CRB3Q9BUF7 120 aa9.49□□□□□ -0.89
SPTLC1-206ENST00000482632 RBCK1Q9BYM8 510 aa9.49□□□□□ -0.89
SPTLC1-206ENST00000482632 MRPL46Q9H2W6 279 aaKnown RBP9.49□□□□□ -0.89
SPTLC1-206ENST00000482632 ACTR8Q9H981 624 aa9.49□□□□□ -0.89
SPTLC1-206ENST00000482632 ACSS2Q9NR19 701 aa9.49□□□□□ -0.89
SPTLC1-206ENST00000482632 SLC22A11Q9NSA0 550 aa9.49□□□□□ -0.89
SPTLC1-206ENST00000482632 GEMIN8Q9NWZ8 242 aaKnown RBP9.49□□□□□ -0.89
SPTLC1-206ENST00000482632 ZFP69BQ9UJL9 534 aa9.49□□□□□ -0.89
SPTLC1-206ENST00000482632 MED13Q9UHV7 2174 aa9.48□□□□□ -0.89
SPTLC1-206ENST00000482632 A0A1W2PPM1 405 aa9.48□□□□□ -0.89
SPTLC1-206ENST00000482632 A6NL46 340 aa9.48□□□□□ -0.89
SPTLC1-206ENST00000482632 ATXN7O15265 892 aaPredicted RBP9.48□□□□□ -0.89
SPTLC1-206ENST00000482632 FOXS1O43638 330 aa9.48□□□□□ -0.89
SPTLC1-206ENST00000482632 KLHL18O94889 574 aa9.48□□□□□ -0.89
SPTLC1-206ENST00000482632 PRB1P04280 392 aa9.48□□□□□ -0.89
SPTLC1-206ENST00000482632 ITGB2P05107 769 aa9.48□□□□□ -0.89
SPTLC1-206ENST00000482632 HEXBP07686 556 aa9.48□□□□□ -0.89
SPTLC1-206ENST00000482632 UQCRHP07919 91 aa9.48□□□□□ -0.89
SPTLC1-206ENST00000482632 ZGLP1P0C6A0 271 aa9.48□□□□□ -0.89
SPTLC1-206ENST00000482632 MTHFD2P13995 350 aa9.48□□□□□ -0.89
SPTLC1-206ENST00000482632 AHRP35869 848 aa9.48□□□□□ -0.89
SPTLC1-206ENST00000482632 CSRP3P50461 194 aa9.48□□□□□ -0.89
SPTLC1-206ENST00000482632 CCL11P51671 97 aa9.48□□□□□ -0.89
SPTLC1-206ENST00000482632 CCNG1P51959 295 aa9.48□□□□□ -0.89
SPTLC1-206ENST00000482632 POLE2P56282 527 aa9.48□□□□□ -0.89
SPTLC1-206ENST00000482632 RAB8AP61006 207 aa9.48□□□□□ -0.89
SPTLC1-206ENST00000482632 SKP1P63208 163 aa9.48□□□□□ -0.89
SPTLC1-206ENST00000482632 OLR1P78380 273 aa9.48□□□□□ -0.89
SPTLC1-206ENST00000482632 LAPTM5Q13571 262 aa9.48□□□□□ -0.89
SPTLC1-206ENST00000482632 PWP1Q13610 501 aa9.48□□□□□ -0.89
SPTLC1-206ENST00000482632 RAPSNQ13702 412 aa9.48□□□□□ -0.89
SPTLC1-206ENST00000482632 GTF2H2Q13888 395 aa9.48□□□□□ -0.89
SPTLC1-206ENST00000482632 SSPNQ14714 243 aa9.48□□□□□ -0.89
SPTLC1-206ENST00000482632 HERC3Q15034 1050 aa9.48□□□□□ -0.89
SPTLC1-206ENST00000482632 MINDY4Q4G0A6 757 aa9.48□□□□□ -0.89
SPTLC1-206ENST00000482632 DEFB134Q4QY38 66 aa9.48□□□□□ -0.89
SPTLC1-206ENST00000482632 VWA2Q5GFL6 755 aa9.48□□□□□ -0.89
SPTLC1-206ENST00000482632 PAGE2BQ5JRK9 111 aa9.48□□□□□ -0.89
SPTLC1-206ENST00000482632 TMEM214Q6NUQ4 689 aaKnown RBP9.48□□□□□ -0.89
SPTLC1-206ENST00000482632 GTF2H2CQ6P1K8 395 aa9.48□□□□□ -0.89
SPTLC1-206ENST00000482632 MRPL14Q6P1L8 145 aaKnown RBP9.48□□□□□ -0.89
SPTLC1-206ENST00000482632 WDR93Q6P2C0 686 aa9.48□□□□□ -0.89
SPTLC1-206ENST00000482632 TIFABQ6ZNK6 161 aa9.48□□□□□ -0.89
SPTLC1-206ENST00000482632 RPS27LQ71UM5 84 aaKnown RBP9.48□□□□□ -0.89
SPTLC1-206ENST00000482632 GOLGA7Q7Z5G4 137 aa9.48□□□□□ -0.89
SPTLC1-206ENST00000482632 TMEM151BQ8IW70 566 aa9.48□□□□□ -0.89
SPTLC1-206ENST00000482632 KLHDC8AQ8IYD2 350 aa9.48□□□□□ -0.89
SPTLC1-206ENST00000482632 TTLQ8NG68 377 aa9.48□□□□□ -0.89
SPTLC1-206ENST00000482632 STT3BQ8TCJ2 826 aa9.48□□□□□ -0.89
SPTLC1-206ENST00000482632 AENQ8WTP8 325 aaKnown RBP9.48□□□□□ -0.89
SPTLC1-206ENST00000482632 MVB12AQ96EY5 273 aa9.48□□□□□ -0.89
SPTLC1-206ENST00000482632 FAR2Q96K12 515 aa9.48□□□□□ -0.89
SPTLC1-206ENST00000482632 GPR78Q96P69 363 aa9.48□□□□□ -0.89
SPTLC1-206ENST00000482632 EFCAB11Q9BUY7 163 aa9.48□□□□□ -0.89
SPTLC1-206ENST00000482632 RHBGQ9H310 441 aa9.48□□□□□ -0.89
SPTLC1-206ENST00000482632 COPS7BQ9H9Q2 264 aaPredicted RBP9.48□□□□□ -0.89
SPTLC1-206ENST00000482632 PPCSQ9HAB8 311 aa9.48□□□□□ -0.89
SPTLC1-206ENST00000482632 FETUBQ9UGM5 382 aa9.48□□□□□ -0.89
SPTLC1-206ENST00000482632 C3orf18Q9UK00 162 aa9.48□□□□□ -0.89
SPTLC1-206ENST00000482632 NXT1Q9UKK6 140 aaKnown RBP9.48□□□□□ -0.89
SPTLC1-206ENST00000482632 TMCO1Q9UM00 188 aa9.48□□□□□ -0.89
SPTLC1-206ENST00000482632 NAALAD2Q9Y3Q0 740 aa9.48□□□□□ -0.89
SPTLC1-206ENST00000482632 TNPO3Q9Y5L0 923 aaKnown RBP9.48□□□□□ -0.89
SPTLC1-206ENST00000482632 CCDC189A1A4V9 331 aa9.47□□□□□ -0.89
SPTLC1-206ENST00000482632 MKRN2OSH3BPM6 223 aa9.47□□□□□ -0.89
SPTLC1-206ENST00000482632 COPEO14579 308 aa9.47□□□□□ -0.89
SPTLC1-206ENST00000482632 ERI3O43414 337 aaKnown RBP9.47□□□□□ -0.89
SPTLC1-206ENST00000482632 CDH16O75309 829 aa9.47□□□□□ -0.89
SPTLC1-206ENST00000482632 GLRA3O75311 464 aa9.47□□□□□ -0.89
SPTLC1-206ENST00000482632 ALOX12BO75342 701 aa9.47□□□□□ -0.89
SPTLC1-206ENST00000482632 KLF7O75840 302 aaPredicted RBP9.47□□□□□ -0.89
SPTLC1-206ENST00000482632 DNAJB5O75953 348 aa9.47□□□□□ -0.89
SPTLC1-206ENST00000482632 NSA2O95478 260 aaKnown RBP9.47□□□□□ -0.89
SPTLC1-206ENST00000482632 ALBP02768 609 aa9.47□□□□□ -0.89
SPTLC1-206ENST00000482632 UMODP07911 640 aa9.47□□□□□ -0.89
SPTLC1-206ENST00000482632 ALOX12P18054 663 aa9.47□□□□□ -0.89
SPTLC1-206ENST00000482632 XCR1P46094 333 aa9.47□□□□□ -0.89
SPTLC1-206ENST00000482632 PIK3CGP48736 1102 aa9.47□□□□□ -0.89
SPTLC1-206ENST00000482632 EMP2P54851 167 aa9.47□□□□□ -0.89
SPTLC1-206ENST00000482632 RRADP55042 308 aa9.47□□□□□ -0.89
SPTLC1-206ENST00000482632 STXBP1P61764 594 aaKnown RBP9.47□□□□□ -0.89
SPTLC1-206ENST00000482632 SNRPNP63162 240 aaKnown RBP9.47□□□□□ -0.89
SPTLC1-206ENST00000482632 PHEXP78562 749 aa9.47□□□□□ -0.89
SPTLC1-206ENST00000482632 EEF1A2Q05639 463 aaKnown RBP9.47□□□□□ -0.89
SPTLC1-206ENST00000482632 KLC1Q07866 573 aa9.47□□□□□ -0.89
SPTLC1-206ENST00000482632 KCNAB2Q13303 367 aa9.47□□□□□ -0.89
SPTLC1-206ENST00000482632 FAM53BQ14153 422 aa9.47□□□□□ -0.89
SPTLC1-206ENST00000482632 LINC00303Q3SY05 128 aa9.47□□□□□ -0.89
SPTLC1-206ENST00000482632 TTC19Q6DKK2 380 aaPredicted RBP9.47□□□□□ -0.89
SPTLC1-206ENST00000482632 MED27Q6P2C8 311 aa9.47□□□□□ -0.89
SPTLC1-206ENST00000482632 MRGPREQ86SM8 312 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms