RNA–Protein interactions for RNA: ENST00000482596.1

CHD6-209, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best)

Gene CHD6, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-209ENST00000482596 SLC39A8Q9C0K1 460 aa5.94□□□□□ -1.46
CHD6-209ENST00000482596 MMP25Q9NPA2 562 aa5.94□□□□□ -1.46
CHD6-209ENST00000482596 TMCC3Q9ULS5 477 aa5.94□□□□□ -1.46
CHD6-209ENST00000482596 PCDHB10Q9UN67 800 aa5.94□□□□□ -1.46
CHD6-209ENST00000482596 COQ4Q9Y3A0 265 aa5.94□□□□□ -1.46
CHD6-209ENST00000482596 ABCA13Q86UQ4 5058 aa5.93□□□□□ -1.46
CHD6-209ENST00000482596 PLCE1Q9P212 2302 aa5.93□□□□□ -1.46
CHD6-209ENST00000482596 C1orf232A0A0U1RR37 186 aa5.93□□□□□ -1.46
CHD6-209ENST00000482596 ATP6AP2A0A1C7CYW4 349 aa5.93□□□□□ -1.46
CHD6-209ENST00000482596 ARHGEF33A8MVX0 844 aa5.93□□□□□ -1.46
CHD6-209ENST00000482596 ACOT7O00154 380 aa5.93□□□□□ -1.46
CHD6-209ENST00000482596 BIN1O00499 593 aa5.93□□□□□ -1.46
CHD6-209ENST00000482596 DDX3XO00571 662 aaKnown RBP eCLIP5.93□□□□□ -1.46
CHD6-209ENST00000482596 SUSD5O60279 629 aa5.93□□□□□ -1.46
CHD6-209ENST00000482596 ERN1O75460 977 aaKnown RBP5.93□□□□□ -1.46
CHD6-209ENST00000482596 ATP6AP2O75787 350 aa5.93□□□□□ -1.46
CHD6-209ENST00000482596 GLSO94925 669 aaPredicted RBP5.93□□□□□ -1.46
CHD6-209ENST00000482596 FGFR1OPO95684 399 aaKnown RBP5.93□□□□□ -1.46
CHD6-209ENST00000482596 SLC25A16P16260 332 aa5.93□□□□□ -1.46
CHD6-209ENST00000482596 MAGP20916 626 aa5.93□□□□□ -1.46
CHD6-209ENST00000482596 USF1P22415 310 aaPredicted RBP5.93□□□□□ -1.46
CHD6-209ENST00000482596 NDUFS1P28331 727 aa5.93□□□□□ -1.46
CHD6-209ENST00000482596 TRHRP34981 398 aaPredicted RBP5.93□□□□□ -1.46
CHD6-209ENST00000482596 OPRM1P35372 400 aa5.93□□□□□ -1.46
CHD6-209ENST00000482596 NUDT6P53370 316 aa5.93□□□□□ -1.46
CHD6-209ENST00000482596 LOXL3P58215 753 aa5.93□□□□□ -1.46
CHD6-209ENST00000482596 TMEM115Q12893 351 aaPredicted RBP5.93□□□□□ -1.46
CHD6-209ENST00000482596 GRM7Q14831 915 aa5.93□□□□□ -1.46
CHD6-209ENST00000482596 KLHL10Q6JEL2 608 aa5.93□□□□□ -1.46
CHD6-209ENST00000482596 CLEC2AQ6UVW9 174 aa5.93□□□□□ -1.46
CHD6-209ENST00000482596 RRAGAQ7L523 313 aa5.93□□□□□ -1.46
CHD6-209ENST00000482596 AMIGO1Q86WK6 493 aa5.93□□□□□ -1.46
CHD6-209ENST00000482596 LACC1Q8IV20 430 aa5.93□□□□□ -1.46
CHD6-209ENST00000482596 ZC3H7AQ8IWR0 971 aaKnown RBP5.93□□□□□ -1.46
CHD6-209ENST00000482596 FBXW8Q8N3Y1 598 aa5.93□□□□□ -1.46
CHD6-209ENST00000482596 TTC29Q8NA56 475 aaPredicted RBP5.93□□□□□ -1.46
CHD6-209ENST00000482596 PHC3Q8NDX5 983 aa5.93□□□□□ -1.46
CHD6-209ENST00000482596 OR2M7Q8NG81 312 aa5.93□□□□□ -1.46
CHD6-209ENST00000482596 LILRB1Q8NHL6 650 aaPredicted RBP5.93□□□□□ -1.46
CHD6-209ENST00000482596 M1APQ8TC57 530 aa5.93□□□□□ -1.46
CHD6-209ENST00000482596 NELFBQ8WX92 580 aa5.93□□□□□ -1.46
CHD6-209ENST00000482596 HTRA1Q92743 480 aa5.93□□□□□ -1.46
CHD6-209ENST00000482596 TBC1D20Q96BZ9 403 aa5.93□□□□□ -1.46
CHD6-209ENST00000482596 MFSD3Q96ES6 412 aa5.93□□□□□ -1.46
CHD6-209ENST00000482596 SYT3Q9BQG1 590 aa5.93□□□□□ -1.46
CHD6-209ENST00000482596 NUP85Q9BW27 656 aa5.93□□□□□ -1.46
CHD6-209ENST00000482596 CLSTN2Q9H4D0 955 aa5.93□□□□□ -1.46
CHD6-209ENST00000482596 LDAHQ9H6V9 325 aa5.93□□□□□ -1.46
CHD6-209ENST00000482596 EXO5Q9H790 373 aa5.93□□□□□ -1.46
CHD6-209ENST00000482596 ESM1Q9NQ30 184 aa5.93□□□□□ -1.46
CHD6-209ENST00000482596 HCN3Q9P1Z3 774 aa5.93□□□□□ -1.46
CHD6-209ENST00000482596 ARMCX3Q9UH62 379 aaPredicted RBP5.93□□□□□ -1.46
CHD6-209ENST00000482596 TMEFF2Q9UIK5 374 aaPredicted RBP5.93□□□□□ -1.46
CHD6-209ENST00000482596 COLEC10Q9Y6Z7 277 aa5.93□□□□□ -1.46
CHD6-209ENST00000482596 MED12LQ86YW9 2145 aa5.93□□□□□ -1.46
CHD6-209ENST00000482596 HECTD4Q9Y4D8 3996 aa5.93□□□□□ -1.46
CHD6-209ENST00000482596 KIAA1109Q2LD37 5005 aa5.93□□□□□ -1.46
CHD6-209ENST00000482596 LCE6AA0A183 80 aa5.92□□□□□ -1.46
CHD6-209ENST00000482596 FITM1A5D6W6 292 aa5.92□□□□□ -1.46
CHD6-209ENST00000482596 TRIM64CA6NLI5 447 aa5.92□□□□□ -1.46
CHD6-209ENST00000482596 OR2AG2A6NM03 316 aa5.92□□□□□ -1.46
CHD6-209ENST00000482596 KPNA5O15131 536 aa5.92□□□□□ -1.46
CHD6-209ENST00000482596 PDPK1O15530 556 aa5.92□□□□□ -1.46
CHD6-209ENST00000482596 GNA14O95837 355 aa5.92□□□□□ -1.46
CHD6-209ENST00000482596 SERPINB3P29508 390 aa5.92□□□□□ -1.46
CHD6-209ENST00000482596 PEBP1P30086 187 aaKnown RBP5.92□□□□□ -1.46
CHD6-209ENST00000482596 LIMS1P48059 325 aa5.92□□□□□ -1.46
CHD6-209ENST00000482596 CETN1Q12798 172 aa5.92□□□□□ -1.46
CHD6-209ENST00000482596 PRKG2Q13237 762 aa5.92□□□□□ -1.46
CHD6-209ENST00000482596 FAM189A2Q15884 450 aa5.92□□□□□ -1.46
CHD6-209ENST00000482596 MEA1Q16626 185 aa5.92□□□□□ -1.46
CHD6-209ENST00000482596 CA9Q16790 459 aa5.92□□□□□ -1.46
CHD6-209ENST00000482596 CDO1Q16878 200 aa5.92□□□□□ -1.46
CHD6-209ENST00000482596 C15orf59Q2T9L4 293 aaPredicted RBP5.92□□□□□ -1.46
CHD6-209ENST00000482596 CCDC40Q4G0X9 1142 aa5.92□□□□□ -1.46
CHD6-209ENST00000482596 YOD1Q5VVQ6 348 aaPredicted RBP5.92□□□□□ -1.46
CHD6-209ENST00000482596 CLEC17AQ6ZS10 378 aa5.92□□□□□ -1.46
CHD6-209ENST00000482596 SLC22A16Q86VW1 577 aa5.92□□□□□ -1.46
CHD6-209ENST00000482596 ARHGEF19Q8IW93 802 aa5.92□□□□□ -1.46
CHD6-209ENST00000482596 OR8H2Q8N162 312 aa5.92□□□□□ -1.46
CHD6-209ENST00000482596 CYP4Z2PQ8N1L4 340 aa5.92□□□□□ -1.46
CHD6-209ENST00000482596 PPM1KQ8N3J5 372 aa5.92□□□□□ -1.46
CHD6-209ENST00000482596 ARL6IP6Q8N6S5 226 aa5.92□□□□□ -1.46
CHD6-209ENST00000482596 RASGEF1AQ8N9B8 481 aa5.92□□□□□ -1.46
CHD6-209ENST00000482596 TAF15Q92804 592 aaKnown RBP eCLIP5.92□□□□□ -1.46
CHD6-209ENST00000482596 NEUROG1Q92886 237 aa5.92□□□□□ -1.46
CHD6-209ENST00000482596 SLC35C1Q96A29 364 aa5.92□□□□□ -1.46
CHD6-209ENST00000482596 C3orf49Q96BT1 292 aa5.92□□□□□ -1.46
CHD6-209ENST00000482596 RBM41Q96IZ5 413 aaKnown RBP5.92□□□□□ -1.46
CHD6-209ENST00000482596 C10orf90Q96M02 699 aa5.92□□□□□ -1.46
CHD6-209ENST00000482596 GBP4Q96PP9 640 aa5.92□□□□□ -1.46
CHD6-209ENST00000482596 FERD3LQ96RJ6 166 aa5.92□□□□□ -1.46
CHD6-209ENST00000482596 CCT8L2Q96SF2 557 aa5.92□□□□□ -1.46
CHD6-209ENST00000482596 ELAC2Q9BQ52 826 aaKnown RBP5.92□□□□□ -1.46
CHD6-209ENST00000482596 HGH1Q9BTY7 390 aa5.92□□□□□ -1.46
CHD6-209ENST00000482596 VN1R1Q9GZP7 353 aa5.92□□□□□ -1.46
CHD6-209ENST00000482596 TFB2MQ9H5Q4 396 aaKnown RBP5.92□□□□□ -1.46
CHD6-209ENST00000482596 BARX1Q9HBU1 254 aaPredicted RBP5.92□□□□□ -1.46
CHD6-209ENST00000482596 C14orf105Q9NVL8 296 aa5.92□□□□□ -1.46
CHD6-209ENST00000482596 PKD2L2Q9NZM6 624 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms