RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 KANK2Q63ZY3 851 aa12.59□□□□□ -0.39
HDAC1-208ENST00000482310 FAM47EQ6ZV65 393 aa12.59□□□□□ -0.39
HDAC1-208ENST00000482310 DDIASQ8IXT1 998 aa12.59□□□□□ -0.39
HDAC1-208ENST00000482310 SLC38A9Q8NBW4 561 aa12.59□□□□□ -0.39
HDAC1-208ENST00000482310 TRPV3Q8NET8 790 aa12.59□□□□□ -0.39
HDAC1-208ENST00000482310 OR8K5Q8NH50 307 aa12.59□□□□□ -0.39
HDAC1-208ENST00000482310 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.59□□□□□ -0.39
HDAC1-208ENST00000482310 TM4SF19Q96DZ7 209 aa12.59□□□□□ -0.39
HDAC1-208ENST00000482310 NAF1Q96HR8 494 aaKnown RBP12.59□□□□□ -0.39
HDAC1-208ENST00000482310 MAGEB10Q96LZ2 347 aaPredicted RBP12.59□□□□□ -0.39
HDAC1-208ENST00000482310 ZNF285Q96NJ3 590 aa12.59□□□□□ -0.39
HDAC1-208ENST00000482310 SLC46A1Q96NT5 459 aa12.59□□□□□ -0.39
HDAC1-208ENST00000482310 C17orf62Q9BQA9 187 aa12.59□□□□□ -0.39
HDAC1-208ENST00000482310 SARGQ9BW04 601 aa12.59□□□□□ -0.39
HDAC1-208ENST00000482310 YIPF2Q9BWQ6 316 aa12.59□□□□□ -0.39
HDAC1-208ENST00000482310 SORBS1Q9BX66 1292 aaKnown RBP12.59□□□□□ -0.39
HDAC1-208ENST00000482310 MS4A8Q9BY19 250 aa12.59□□□□□ -0.39
HDAC1-208ENST00000482310 ASPSCR1Q9BZE9 553 aa12.59□□□□□ -0.39
HDAC1-208ENST00000482310 NRSN2Q9GZP1 204 aa12.59□□□□□ -0.39
HDAC1-208ENST00000482310 PITHD1Q9GZP4 211 aaPredicted RBP12.59□□□□□ -0.39
HDAC1-208ENST00000482310 AICDAQ9GZX7 198 aa12.59□□□□□ -0.39
HDAC1-208ENST00000482310 RHBGQ9H310 441 aa12.59□□□□□ -0.39
HDAC1-208ENST00000482310 PNPOQ9NVS9 261 aa12.59□□□□□ -0.39
HDAC1-208ENST00000482310 SLC12A4Q9UP95 1085 aa12.59□□□□□ -0.39
HDAC1-208ENST00000482310 TRAF6Q9Y4K3 522 aa12.59□□□□□ -0.39
HDAC1-208ENST00000482310 SGK494L7N484 410 aa12.58□□□□□ -0.4
HDAC1-208ENST00000482310 POLR3GO15318 223 aaPredicted RBP12.58□□□□□ -0.4
HDAC1-208ENST00000482310 ULK1O75385 1050 aa12.58□□□□□ -0.4
HDAC1-208ENST00000482310 CLEC3AO75596 197 aa12.58□□□□□ -0.4
HDAC1-208ENST00000482310 ETHE1O95571 254 aa12.58□□□□□ -0.4
HDAC1-208ENST00000482310 TBX6O95947 436 aaPredicted RBP12.58□□□□□ -0.4
HDAC1-208ENST00000482310 LINC00032P0C843 101 aa12.58□□□□□ -0.4
HDAC1-208ENST00000482310 UROSP10746 265 aa12.58□□□□□ -0.4
HDAC1-208ENST00000482310 IGF2RP11717 2491 aa12.58□□□□□ -0.4
HDAC1-208ENST00000482310 SERPINB5P36952 375 aa12.58□□□□□ -0.4
HDAC1-208ENST00000482310 OR1D4P47884 311 aa12.58□□□□□ -0.4
HDAC1-208ENST00000482310 STXBP1P61764 594 aaKnown RBP12.58□□□□□ -0.4
HDAC1-208ENST00000482310 HMGCS1Q01581 520 aa12.58□□□□□ -0.4
HDAC1-208ENST00000482310 RELAQ04206 551 aa12.58□□□□□ -0.4
HDAC1-208ENST00000482310 PCDH1Q08174 1060 aa12.58□□□□□ -0.4
HDAC1-208ENST00000482310 NDUFA9Q16795 377 aa12.58□□□□□ -0.4
HDAC1-208ENST00000482310 IMPG1Q17R60 797 aa12.58□□□□□ -0.4
HDAC1-208ENST00000482310 MUM1Q2TAK8 710 aa12.58□□□□□ -0.4
HDAC1-208ENST00000482310 DEFB134Q4QY38 66 aa12.58□□□□□ -0.4
HDAC1-208ENST00000482310 TMEM214Q6NUQ4 689 aaKnown RBP12.58□□□□□ -0.4
HDAC1-208ENST00000482310 OR9A4Q8NGU2 314 aa12.58□□□□□ -0.4
HDAC1-208ENST00000482310 NT5CQ8TCD5 201 aa12.58□□□□□ -0.4
HDAC1-208ENST00000482310 TWIST2Q8WVJ9 160 aa12.58□□□□□ -0.4
HDAC1-208ENST00000482310 CKAP2Q8WWK9 683 aa12.58□□□□□ -0.4
HDAC1-208ENST00000482310 MAGEB18Q96M61 343 aa12.58□□□□□ -0.4
HDAC1-208ENST00000482310 SLC6A16Q9GZN6 736 aa12.58□□□□□ -0.4
HDAC1-208ENST00000482310 REXO4Q9GZR2 422 aaKnown RBP12.58□□□□□ -0.4
HDAC1-208ENST00000482310 ILKAPQ9H0C8 392 aaPredicted RBP12.58□□□□□ -0.4
HDAC1-208ENST00000482310 SLCO1B3Q9NPD5 702 aa12.58□□□□□ -0.4
HDAC1-208ENST00000482310 ASCL3Q9NQ33 180 aa12.58□□□□□ -0.4
HDAC1-208ENST00000482310 THAP1Q9NVV9 213 aa12.58□□□□□ -0.4
HDAC1-208ENST00000482310 HCN3Q9P1Z3 774 aa12.58□□□□□ -0.4
HDAC1-208ENST00000482310 MSRB2Q9Y3D2 182 aa12.58□□□□□ -0.4
HDAC1-208ENST00000482310 RAP2CQ9Y3L5 183 aa12.58□□□□□ -0.4
HDAC1-208ENST00000482310 FREM2Q5SZK8 3169 aa12.57□□□□□ -0.4
HDAC1-208ENST00000482310 LRIT2A6NDA9 550 aa12.57□□□□□ -0.4
HDAC1-208ENST00000482310 TCP11X1B4DZS4 312 aa12.57□□□□□ -0.4
HDAC1-208ENST00000482310 TXNDC9O14530 226 aa12.57□□□□□ -0.4
HDAC1-208ENST00000482310 DSCR3O14972 297 aa12.57□□□□□ -0.4
HDAC1-208ENST00000482310 PIP5K1BO14986 540 aa12.57□□□□□ -0.4
HDAC1-208ENST00000482310 SNNO75324 88 aaPredicted RBP12.57□□□□□ -0.4
HDAC1-208ENST00000482310 RDH16O75452 317 aa12.57□□□□□ -0.4
HDAC1-208ENST00000482310 CHEK2O96017 543 aa12.57□□□□□ -0.4
HDAC1-208ENST00000482310 SERPINA6P08185 405 aa12.57□□□□□ -0.4
HDAC1-208ENST00000482310 PIK3CBP42338 1070 aa12.57□□□□□ -0.4
HDAC1-208ENST00000482310 BTN3A2P78410 334 aa12.57□□□□□ -0.4
HDAC1-208ENST00000482310 MAT1AQ00266 395 aaKnown RBP12.57□□□□□ -0.4
HDAC1-208ENST00000482310 SF3A3Q12874 501 aaKnown RBP eCLIP12.57□□□□□ -0.42e-7■■■■□ 24.2
HDAC1-208ENST00000482310 PWP1Q13610 501 aa12.57□□□□□ -0.4
HDAC1-208ENST00000482310 SYT16Q17RD7 645 aa12.57□□□□□ -0.4
HDAC1-208ENST00000482310 SPDYAQ5MJ70 313 aa12.57□□□□□ -0.4
HDAC1-208ENST00000482310 ARHGAP40Q5TG30 622 aa12.57□□□□□ -0.4
HDAC1-208ENST00000482310 TRIM40Q6P9F5 258 aa12.57□□□□□ -0.4
HDAC1-208ENST00000482310 FAM199XQ6PEV8 388 aaPredicted RBP12.57□□□□□ -0.4
HDAC1-208ENST00000482310 ABHD13Q7L211 337 aa12.57□□□□□ -0.4
HDAC1-208ENST00000482310 BPHLQ86WA6 291 aaPredicted RBP12.57□□□□□ -0.4
HDAC1-208ENST00000482310 RAB3IL1Q8TBN0 382 aa12.57□□□□□ -0.4
HDAC1-208ENST00000482310 UTP15Q8TED0 518 aaKnown RBP12.57□□□□□ -0.4
HDAC1-208ENST00000482310 MR1Q95460 341 aa12.57□□□□□ -0.4
HDAC1-208ENST00000482310 GAL3ST3Q96A11 431 aa12.57□□□□□ -0.4
HDAC1-208ENST00000482310 COL26A1Q96A83 441 aa12.57□□□□□ -0.4
HDAC1-208ENST00000482310 MS4A6EQ96DS6 147 aa12.57□□□□□ -0.4
HDAC1-208ENST00000482310 MMABQ96EY8 250 aaPredicted RBP12.57□□□□□ -0.4
HDAC1-208ENST00000482310 THOC1Q96FV9 657 aaKnown RBP12.57□□□□□ -0.4
HDAC1-208ENST00000482310 CMTM7Q96FZ5 175 aa12.57□□□□□ -0.4
HDAC1-208ENST00000482310 FAR2Q96K12 515 aa12.57□□□□□ -0.4
HDAC1-208ENST00000482310 TEFMQ96QE5 360 aaKnown RBP12.57□□□□□ -0.4
HDAC1-208ENST00000482310 ZPBPQ9BS86 351 aa12.57□□□□□ -0.4
HDAC1-208ENST00000482310 RBCK1Q9BYM8 510 aa12.57□□□□□ -0.4
HDAC1-208ENST00000482310 ACPTQ9BZG2 426 aa12.57□□□□□ -0.4
HDAC1-208ENST00000482310 AKIRIN1Q9H9L7 192 aaPredicted RBP12.57□□□□□ -0.4
HDAC1-208ENST00000482310 COPS7BQ9H9Q2 264 aaPredicted RBP12.57□□□□□ -0.4
HDAC1-208ENST00000482310 ANKHQ9HCJ1 492 aa12.57□□□□□ -0.4
HDAC1-208ENST00000482310 THSD1Q9NS62 852 aa12.57□□□□□ -0.4
HDAC1-208ENST00000482310 SRPK3Q9UPE1 567 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms