RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 ERN1O75460 977 aaKnown RBP13.87□□□□□ -0.19
CHD3-211ENST00000481999 RETP07949 1114 aa13.87□□□□□ -0.19
CHD3-211ENST00000481999 ANXA4P09525 319 aaPredicted RBP13.87□□□□□ -0.19
CHD3-211ENST00000481999 HOXB3P14651 431 aaPredicted RBP13.87□□□□□ -0.19
CHD3-211ENST00000481999 PRPH2P23942 346 aa13.87□□□□□ -0.19
CHD3-211ENST00000481999 SHMT2P34897 504 aa13.87□□□□□ -0.19
CHD3-211ENST00000481999 HNF4AP41235 474 aa13.87□□□□□ -0.19
CHD3-211ENST00000481999 RANBP1P43487 201 aa13.87□□□□□ -0.19
CHD3-211ENST00000481999 WNT3P56703 355 aa13.87□□□□□ -0.19
CHD3-211ENST00000481999 MYBPC3Q14896 1274 aa13.87□□□□□ -0.19
CHD3-211ENST00000481999 MED27Q6P2C8 311 aa13.87□□□□□ -0.19
CHD3-211ENST00000481999 VN1R5Q7Z5H4 357 aa13.87□□□□□ -0.19
CHD3-211ENST00000481999 PJA1Q8NG27 643 aa13.87□□□□□ -0.19
CHD3-211ENST00000481999 OR13F1Q8NGS4 319 aa13.87□□□□□ -0.19
CHD3-211ENST00000481999 CCL4L1Q8NHW4 92 aa13.87□□□□□ -0.19
CHD3-211ENST00000481999 SLC5A11Q8WWX8 675 aa13.87□□□□□ -0.19
CHD3-211ENST00000481999 NRBF2Q96F24 287 aa13.87□□□□□ -0.19
CHD3-211ENST00000481999 MRGPRX1Q96LB2 322 aa13.87□□□□□ -0.19
CHD3-211ENST00000481999 INSM2Q96T92 566 aaPredicted RBP13.87□□□□□ -0.19
CHD3-211ENST00000481999 RBM4BQ9BQ04 359 aaKnown RBP13.87□□□□□ -0.19
CHD3-211ENST00000481999 DPH2Q9BQC3 489 aaPredicted RBP13.87□□□□□ -0.19
CHD3-211ENST00000481999 RBM4Q9BWF3 364 aaKnown RBP13.87□□□□□ -0.19
CHD3-211ENST00000481999 OSBPL10Q9BXB5 764 aa13.87□□□□□ -0.19
CHD3-211ENST00000481999 PRDM8Q9NQV8 689 aa13.87□□□□□ -0.19
CHD3-211ENST00000481999 EXO1Q9UQ84 846 aaKnown RBP13.87□□□□□ -0.19
CHD3-211ENST00000481999 GPSM3Q9Y4H4 160 aa13.87□□□□□ -0.19
CHD3-211ENST00000481999 ARHGEF17Q96PE2 2063 aaPredicted RBP13.86□□□□□ -0.19
CHD3-211ENST00000481999 GABRR3A8MPY1 467 aa13.86□□□□□ -0.19
CHD3-211ENST00000481999 ANHXE9PGG2 379 aa13.86□□□□□ -0.19
CHD3-211ENST00000481999 PRKD3O94806 890 aa13.86□□□□□ -0.19
CHD3-211ENST00000481999 CPSF4O95639 269 aaKnown RBP13.86□□□□□ -0.19
CHD3-211ENST00000481999 EML2O95834 649 aa13.86□□□□□ -0.19
CHD3-211ENST00000481999 TBX6O95947 436 aaPredicted RBP13.86□□□□□ -0.19
CHD3-211ENST00000481999 COX7A2P14406 83 aa13.86□□□□□ -0.19
CHD3-211ENST00000481999 TNFRSF4P43489 277 aa13.86□□□□□ -0.19
CHD3-211ENST00000481999 ENTPD1P49961 510 aa13.86□□□□□ -0.19
CHD3-211ENST00000481999 RPS21P63220 83 aaKnown RBP13.86□□□□□ -0.19
CHD3-211ENST00000481999 PPP2R2BQ00005 443 aa13.86□□□□□ -0.19
CHD3-211ENST00000481999 TUBA3CQ13748 450 aa13.86□□□□□ -0.19
CHD3-211ENST00000481999 CCDC85BQ15834 202 aaPredicted RBP13.86□□□□□ -0.19
CHD3-211ENST00000481999 PRAMEF14Q5SWL7 426 aa13.86□□□□□ -0.19
CHD3-211ENST00000481999 PRAMEF13Q5VWM6 474 aa13.86□□□□□ -0.19
CHD3-211ENST00000481999 GPR153Q6NV75 609 aa13.86□□□□□ -0.19
CHD3-211ENST00000481999 KLHL35Q6PF15 583 aa13.86□□□□□ -0.19
CHD3-211ENST00000481999 KIAA1324Q6UXG2 1013 aaKnown RBP13.86□□□□□ -0.19
CHD3-211ENST00000481999 ADHFE1Q8IWW8 467 aa13.86□□□□□ -0.19
CHD3-211ENST00000481999 FAM9CQ8IZT9 166 aa13.86□□□□□ -0.19
CHD3-211ENST00000481999 DEFB123Q8N688 67 aa13.86□□□□□ -0.19
CHD3-211ENST00000481999 ZNF555Q8NEP9 628 aa13.86□□□□□ -0.19
CHD3-211ENST00000481999 OR5K2Q8NHB8 316 aa13.86□□□□□ -0.19
CHD3-211ENST00000481999 HDAC2Q92769 488 aaKnown RBP13.86□□□□□ -0.19
CHD3-211ENST00000481999 PDXPQ96GD0 296 aa13.86□□□□□ -0.19
CHD3-211ENST00000481999 GABRG3Q99928 467 aa13.86□□□□□ -0.19
CHD3-211ENST00000481999 MACROD1Q9BQ69 325 aa13.86□□□□□ -0.19
CHD3-211ENST00000481999 C1QTNF2Q9BXJ5 285 aa13.86□□□□□ -0.19
CHD3-211ENST00000481999 TMEM121BQ9BXQ6 578 aaPredicted RBP13.86□□□□□ -0.19
CHD3-211ENST00000481999 MAGIXQ9H6Y5 334 aa13.86□□□□□ -0.19
CHD3-211ENST00000481999 KAT8Q9H7Z6 458 aaKnown RBP13.86□□□□□ -0.19
CHD3-211ENST00000481999 FAM118AQ9NWS6 357 aa13.86□□□□□ -0.19
CHD3-211ENST00000481999 C2orf42Q9NWW7 574 aa13.86□□□□□ -0.19
CHD3-211ENST00000481999 SHISA7A6NL88 538 aa13.86□□□□□ -0.19
CHD3-211ENST00000481999 FAM220BPB1ANY3 271 aa13.86□□□□□ -0.19
CHD3-211ENST00000481999 H7BY64 318 aa13.86□□□□□ -0.19
CHD3-211ENST00000481999 RFXANKO14593 260 aa13.86□□□□□ -0.19
CHD3-211ENST00000481999 PPM1DO15297 605 aa13.86□□□□□ -0.19
CHD3-211ENST00000481999 SCN2BO60939 215 aa13.86□□□□□ -0.19
CHD3-211ENST00000481999 ABCB1P08183 1280 aaPredicted RBP13.86□□□□□ -0.19
CHD3-211ENST00000481999 C1GALT1C1LP0DN25 315 aa13.86□□□□□ -0.19
CHD3-211ENST00000481999 PRPS2P11908 318 aa13.86□□□□□ -0.19
CHD3-211ENST00000481999 KIR3DL1P43629 444 aa13.86□□□□□ -0.19
CHD3-211ENST00000481999 IST1P53990 364 aa13.86□□□□□ -0.19
CHD3-211ENST00000481999 TMBIM6P55061 237 aa13.86□□□□□ -0.19
CHD3-211ENST00000481999 CSTF3Q12996 717 aaKnown RBP13.86□□□□□ -0.19
CHD3-211ENST00000481999 LAPTM5Q13571 262 aa13.86□□□□□ -0.19
CHD3-211ENST00000481999 ZNF385BQ569K4 471 aa13.86□□□□□ -0.19
CHD3-211ENST00000481999 Q6ZS52 159 aa13.86□□□□□ -0.19
CHD3-211ENST00000481999 COMMD6Q7Z4G1 85 aa13.86□□□□□ -0.19
CHD3-211ENST00000481999 OR4K1Q8NGD4 311 aa13.86□□□□□ -0.19
CHD3-211ENST00000481999 NCLNQ969V3 563 aa13.86□□□□□ -0.19
CHD3-211ENST00000481999 SIPA1Q96FS4 1042 aa13.86□□□□□ -0.19
CHD3-211ENST00000481999 PRAP1Q96NZ9 151 aa13.86□□□□□ -0.19
CHD3-211ENST00000481999 PANX1Q96RD7 426 aa13.86□□□□□ -0.19
CHD3-211ENST00000481999 KCNH6Q9H252 994 aa13.86□□□□□ -0.19
CHD3-211ENST00000481999 ADNPQ9H2P0 1102 aa13.86□□□□□ -0.19
CHD3-211ENST00000481999 DCAF13Q9NV06 445 aaKnown RBP13.86□□□□□ -0.19
CHD3-211ENST00000481999 SCHIP1Q9P0W5 487 aaPredicted RBP13.86□□□□□ -0.19
CHD3-211ENST00000481999 CD207Q9UJ71 328 aa13.86□□□□□ -0.19
CHD3-211ENST00000481999 DYRK1BQ9Y463 629 aa13.86□□□□□ -0.19
CHD3-211ENST00000481999 hCG_2014768A0A024R1R8 64 aa13.85□□□□□ -0.19
CHD3-211ENST00000481999 TRBV23OR9-2A0A075B6M9 112 aa13.85□□□□□ -0.19
CHD3-211ENST00000481999 A0A096LPI6 279 aa13.85□□□□□ -0.19
CHD3-211ENST00000481999 A0A1W2PPW3 197 aa13.85□□□□□ -0.19
CHD3-211ENST00000481999 B4GAT1O43505 415 aa13.85□□□□□ -0.19
CHD3-211ENST00000481999 ABCB7O75027 752 aa13.85□□□□□ -0.19
CHD3-211ENST00000481999 KLHL18O94889 574 aa13.85□□□□□ -0.19
CHD3-211ENST00000481999 SLC35G4P0C7Q5 338 aa13.85□□□□□ -0.19
CHD3-211ENST00000481999 PCSK2P16519 638 aa13.85□□□□□ -0.19
CHD3-211ENST00000481999 NDUFV2P19404 249 aa13.85□□□□□ -0.19
CHD3-211ENST00000481999 CRHBPP24387 322 aa13.85□□□□□ -0.19
CHD3-211ENST00000481999 AK4P27144 223 aaPredicted RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms