RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 AFAP1L2Q8N4X5 818 aa14.34□□□□□ -0.11
LIMS3-203ENST00000480744 PLPP5Q8NEB5 264 aa14.34□□□□□ -0.11
LIMS3-203ENST00000480744 OR4K1Q8NGD4 311 aa14.34□□□□□ -0.11
LIMS3-203ENST00000480744 SIGLEC12Q96PQ1 595 aa14.34□□□□□ -0.11
LIMS3-203ENST00000480744 WDR83Q9BRX9 315 aaKnown RBP14.34□□□□□ -0.11
LIMS3-203ENST00000480744 HES7Q9BYE0 225 aa14.34□□□□□ -0.11
LIMS3-203ENST00000480744 TRIM31Q9BZY9 425 aa14.34□□□□□ -0.11
LIMS3-203ENST00000480744 MMP25Q9NPA2 562 aa14.34□□□□□ -0.11
LIMS3-203ENST00000480744 ZFATQ9P243 1243 aa14.34□□□□□ -0.11
LIMS3-203ENST00000480744 ZFP69BQ9UJL9 534 aa14.34□□□□□ -0.11
LIMS3-203ENST00000480744 PCNX1Q96RV3 2341 aa14.33□□□□□ -0.11
LIMS3-203ENST00000480744 GABRR3A8MPY1 467 aa14.33□□□□□ -0.12
LIMS3-203ENST00000480744 CDC7O00311 574 aa14.33□□□□□ -0.12
LIMS3-203ENST00000480744 MAN1A2O60476 641 aa14.33□□□□□ -0.12
LIMS3-203ENST00000480744 CD96P40200 585 aa14.33□□□□□ -0.12
LIMS3-203ENST00000480744 SCTRP47872 440 aa14.33□□□□□ -0.12
LIMS3-203ENST00000480744 ITGA8P53708 1063 aa14.33□□□□□ -0.12
LIMS3-203ENST00000480744 SLC26A5P58743 744 aa14.33□□□□□ -0.12
LIMS3-203ENST00000480744 RAB8AP61006 207 aa14.33□□□□□ -0.12
LIMS3-203ENST00000480744 GNG11P61952 73 aa14.33□□□□□ -0.12
LIMS3-203ENST00000480744 RBBP5Q15291 538 aaKnown RBP14.33□□□□□ -0.12
LIMS3-203ENST00000480744 OR1C1Q15619 314 aa14.33□□□□□ -0.12
LIMS3-203ENST00000480744 STEAP4Q687X5 459 aa14.33□□□□□ -0.12
LIMS3-203ENST00000480744 SBSNQ6UWP8 590 aa14.33□□□□□ -0.12
LIMS3-203ENST00000480744 SYDE1Q6ZW31 735 aaPredicted RBP14.33□□□□□ -0.12
LIMS3-203ENST00000480744 TMPRSS11BQ86T26 416 aa14.33□□□□□ -0.12
LIMS3-203ENST00000480744 THOC6Q86W42 341 aaKnown RBP14.33□□□□□ -0.12
LIMS3-203ENST00000480744 SLC34A3Q8N130 599 aa14.33□□□□□ -0.12
LIMS3-203ENST00000480744 SLC5A8Q8N695 610 aa14.33□□□□□ -0.12
LIMS3-203ENST00000480744 MDS2Q8NDY4 140 aa14.33□□□□□ -0.12
LIMS3-203ENST00000480744 NT5CQ8TCD5 201 aa14.33□□□□□ -0.12
LIMS3-203ENST00000480744 MARVELD3Q96A59 401 aa14.33□□□□□ -0.12
LIMS3-203ENST00000480744 PTCHD1Q96NR3 888 aa14.33□□□□□ -0.12
LIMS3-203ENST00000480744 NPAS2Q99743 824 aa14.33□□□□□ -0.12
LIMS3-203ENST00000480744 EGFL8Q99944 293 aa14.33□□□□□ -0.12
LIMS3-203ENST00000480744 AIF1LQ9BQI0 150 aa14.33□□□□□ -0.12
LIMS3-203ENST00000480744 SARGQ9BW04 601 aa14.33□□□□□ -0.12
LIMS3-203ENST00000480744 TSPAN10Q9H1Z9 355 aaPredicted RBP14.33□□□□□ -0.12
LIMS3-203ENST00000480744 RHBGQ9H310 441 aa14.33□□□□□ -0.12
LIMS3-203ENST00000480744 PSAT1Q9Y617 370 aa14.33□□□□□ -0.12
LIMS3-203ENST00000480744 TEX264Q9Y6I9 313 aa14.33□□□□□ -0.12
LIMS3-203ENST00000480744 GTF3C1Q12789 2109 aa14.32□□□□□ -0.12
LIMS3-203ENST00000480744 FAM95CA0A1B0GW59 222 aa14.32□□□□□ -0.12
LIMS3-203ENST00000480744 NDC80O14777 642 aa14.32□□□□□ -0.12
LIMS3-203ENST00000480744 HNRNPRO43390 633 aaKnown RBP14.32□□□□□ -0.12
LIMS3-203ENST00000480744 CD46P15529 392 aa14.32□□□□□ -0.12
LIMS3-203ENST00000480744 ZNF37AP17032 561 aaPredicted RBP14.32□□□□□ -0.12
LIMS3-203ENST00000480744 EEF1DP29692 281 aaKnown RBP14.32□□□□□ -0.12
LIMS3-203ENST00000480744 AHRP35869 848 aa14.32□□□□□ -0.12
LIMS3-203ENST00000480744 CASP6P55212 293 aa14.32□□□□□ -0.12
LIMS3-203ENST00000480744 REEP5Q00765 189 aa14.32□□□□□ -0.12
LIMS3-203ENST00000480744 MGAT5Q09328 741 aa14.32□□□□□ -0.12
LIMS3-203ENST00000480744 ZNF460Q14592 562 aa14.32□□□□□ -0.12
LIMS3-203ENST00000480744 SP5Q6BEB4 398 aaPredicted RBP14.32□□□□□ -0.12
LIMS3-203ENST00000480744 SPINK14Q6IE38 97 aa14.32□□□□□ -0.12
LIMS3-203ENST00000480744 NIPAL1Q6NVV3 410 aa14.32□□□□□ -0.12
LIMS3-203ENST00000480744 FRA10AC1Q70Z53 315 aa14.32□□□□□ -0.12
LIMS3-203ENST00000480744 STRA8Q7Z7C7 330 aa14.32□□□□□ -0.12
LIMS3-203ENST00000480744 SRRM1Q8IYB3 904 aaKnown RBP14.32□□□□□ -0.12
LIMS3-203ENST00000480744 UTP15Q8TED0 518 aaKnown RBP14.32□□□□□ -0.12
LIMS3-203ENST00000480744 LRRC39Q96DD0 335 aa14.32□□□□□ -0.12
LIMS3-203ENST00000480744 RUNDC3BQ96NL0 473 aa14.32□□□□□ -0.12
LIMS3-203ENST00000480744 CDCP1Q9H5V8 836 aa14.32□□□□□ -0.12
LIMS3-203ENST00000480744 PELI2Q9HAT8 420 aa14.32□□□□□ -0.12
LIMS3-203ENST00000480744 ENTPD4Q9Y227 616 aa14.32□□□□□ -0.12
LIMS3-203ENST00000480744 SLC22A14Q9Y267 594 aa14.32□□□□□ -0.12
LIMS3-203ENST00000480744 CTAGE15A4D2H0 777 aa14.31□□□□□ -0.12
LIMS3-203ENST00000480744 URADA6NGE7 173 aa14.31□□□□□ -0.12
LIMS3-203ENST00000480744 A8MUA0 341 aa14.31□□□□□ -0.12
LIMS3-203ENST00000480744 PSMD12O00232 456 aaPredicted RBP14.31□□□□□ -0.12
LIMS3-203ENST00000480744 PRMT3O60678 531 aa14.31□□□□□ -0.12
LIMS3-203ENST00000480744 WISP2O76076 250 aa14.31□□□□□ -0.12
LIMS3-203ENST00000480744 CA7P43166 264 aa14.31□□□□□ -0.12
LIMS3-203ENST00000480744 BTG2P78543 158 aa14.31□□□□□ -0.12
LIMS3-203ENST00000480744 ALDH6A1Q02252 535 aaKnown RBP14.31□□□□□ -0.12
LIMS3-203ENST00000480744 PDIA2Q13087 525 aaKnown RBP14.31□□□□□ -0.12
LIMS3-203ENST00000480744 NAA30Q147X3 362 aaPredicted RBP14.31□□□□□ -0.12
LIMS3-203ENST00000480744 FASTKD3Q14CZ7 662 aaKnown RBP14.31□□□□□ -0.12
LIMS3-203ENST00000480744 PPP1R3AQ16821 1122 aa14.31□□□□□ -0.12
LIMS3-203ENST00000480744 TOR1AIP1Q5JTV8 583 aa14.31□□□□□ -0.12
LIMS3-203ENST00000480744 NXPE4Q6UWF7 544 aa14.31□□□□□ -0.12
LIMS3-203ENST00000480744 CAPN12Q6ZSI9 719 aa14.31□□□□□ -0.12
LIMS3-203ENST00000480744 CTAGE6Q86UF2 777 aa14.31□□□□□ -0.12
LIMS3-203ENST00000480744 ZC3HC1Q86WB0 502 aaKnown RBP14.31□□□□□ -0.12
LIMS3-203ENST00000480744 KIF2BQ8N4N8 673 aa14.31□□□□□ -0.12
LIMS3-203ENST00000480744 NKAPQ8N5F7 415 aaKnown RBP14.31□□□□□ -0.12
LIMS3-203ENST00000480744 ANKRD53Q8N9V6 530 aa14.31□□□□□ -0.12
LIMS3-203ENST00000480744 TMEM178AQ8NBL3 297 aa14.31□□□□□ -0.12
LIMS3-203ENST00000480744 FBXO36Q8NEA4 188 aa14.31□□□□□ -0.12
LIMS3-203ENST00000480744 TRPV3Q8NET8 790 aa14.31□□□□□ -0.12
LIMS3-203ENST00000480744 ITLN2Q8WWU7 325 aaPredicted RBP14.31□□□□□ -0.12
LIMS3-203ENST00000480744 CCDC120Q96HB5 630 aa14.31□□□□□ -0.12
LIMS3-203ENST00000480744 PDLIM5Q96HC4 596 aaKnown RBP14.31□□□□□ -0.12
LIMS3-203ENST00000480744 MAGED4Q96JG8 741 aa14.31□□□□□ -0.12
LIMS3-203ENST00000480744 KLHL31Q9H511 634 aa14.31□□□□□ -0.12
LIMS3-203ENST00000480744 KCNE2Q9Y6J6 123 aa14.31□□□□□ -0.12
LIMS3-203ENST00000480744 ENO4A6NNW6 628 aa14.3□□□□□ -0.12
LIMS3-203ENST00000480744 NPIPA5E9PKD4 350 aa14.3□□□□□ -0.12
LIMS3-203ENST00000480744 SLC19A2O60779 497 aa14.3□□□□□ -0.12
LIMS3-203ENST00000480744 SEC31AO94979 1220 aaKnown RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms