RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 ZNF420Q8TAQ5 688 aaPredicted RBP9.26□□□□□ -0.93
VEGFA-212ENST00000480614 HMGB4Q8WW32 186 aa9.26□□□□□ -0.93
VEGFA-212ENST00000480614 HCN4Q9Y3Q4 1203 aa9.26□□□□□ -0.93
VEGFA-212ENST00000480614 PRSS58Q8IYP2 241 aa9.26□□□□□ -0.93
VEGFA-212ENST00000480614 CGREF1Q99674 301 aa9.26□□□□□ -0.93
VEGFA-212ENST00000480614 TM9SF2Q99805 663 aa9.26□□□□□ -0.93
VEGFA-212ENST00000480614 ITPAQ9BY32 194 aa9.26□□□□□ -0.93
VEGFA-212ENST00000480614 GRHPRQ9UBQ7 328 aa9.26□□□□□ -0.93
VEGFA-212ENST00000480614 SHPRHQ149N8 1683 aa9.26□□□□□ -0.93
VEGFA-212ENST00000480614 DNAJB5O75953 348 aa9.26□□□□□ -0.93
VEGFA-212ENST00000480614 GNAO1P09471 354 aa9.26□□□□□ -0.93
VEGFA-212ENST00000480614 OXTRP30559 389 aa9.26□□□□□ -0.93
VEGFA-212ENST00000480614 DMRTB1Q96MA1 342 aa9.26□□□□□ -0.93
VEGFA-212ENST00000480614 PCDHGC4Q9Y5F7 938 aa9.26□□□□□ -0.93
VEGFA-212ENST00000480614 MED12Q93074 2177 aa9.26□□□□□ -0.93
VEGFA-212ENST00000480614 MUSKO15146 869 aa9.26□□□□□ -0.93
VEGFA-212ENST00000480614 KLK1P06870 262 aa9.26□□□□□ -0.93
VEGFA-212ENST00000480614 FPR1P21462 350 aa9.26□□□□□ -0.93
VEGFA-212ENST00000480614 PTGR1Q14914 329 aa9.26□□□□□ -0.93
VEGFA-212ENST00000480614 PHF19Q5T6S3 580 aa9.26□□□□□ -0.93
VEGFA-212ENST00000480614 NCEH1Q6PIU2 408 aa9.26□□□□□ -0.93
VEGFA-212ENST00000480614 KLHL15Q96M94 604 aa9.26□□□□□ -0.93
VEGFA-212ENST00000480614 CDC7O00311 574 aa9.26□□□□□ -0.93
VEGFA-212ENST00000480614 SCGB1D2O95969 90 aa9.26□□□□□ -0.93
VEGFA-212ENST00000480614 MYCLP1P12525 358 aaPredicted RBP9.26□□□□□ -0.93
VEGFA-212ENST00000480614 BCKDHAP12694 445 aa9.26□□□□□ -0.93
VEGFA-212ENST00000480614 CLRN1P58418 232 aa9.26□□□□□ -0.93
VEGFA-212ENST00000480614 CDK6Q00534 326 aa9.26□□□□□ -0.93
VEGFA-212ENST00000480614 TREML2Q5T2D2 321 aa9.26□□□□□ -0.93
VEGFA-212ENST00000480614 KIAA1614Q5VZ46 1190 aa9.26□□□□□ -0.93
VEGFA-212ENST00000480614 LDB1Q86U70 411 aaPredicted RBP9.26□□□□□ -0.93
VEGFA-212ENST00000480614 HSPA12BQ96MM6 686 aa9.26□□□□□ -0.93
VEGFA-212ENST00000480614 KATNBL1Q9H079 304 aa9.26□□□□□ -0.93
VEGFA-212ENST00000480614 EBF3Q9H4W6 596 aa9.26□□□□□ -0.93
VEGFA-212ENST00000480614 SEC61A2Q9H9S3 476 aa9.26□□□□□ -0.93
VEGFA-212ENST00000480614 VIPR1P32241 457 aa9.26□□□□□ -0.93
VEGFA-212ENST00000480614 ELOAQ14241 798 aaKnown RBP9.26□□□□□ -0.93
VEGFA-212ENST00000480614 ABCB8Q9NUT2 735 aa9.26□□□□□ -0.93
VEGFA-212ENST00000480614 ISPDA4D126 451 aa9.25□□□□□ -0.93
VEGFA-212ENST00000480614 LCHNA4D1U4 455 aa9.25□□□□□ -0.93
VEGFA-212ENST00000480614 TRIM64CA6NLI5 447 aa9.25□□□□□ -0.93
VEGFA-212ENST00000480614 NT5C1B-RDH14C9J2C7 533 aa9.25□□□□□ -0.93
VEGFA-212ENST00000480614 NCK1P16333 377 aa9.25□□□□□ -0.93
VEGFA-212ENST00000480614 ACTC1P68032 377 aa9.25□□□□□ -0.93
VEGFA-212ENST00000480614 ACTA1P68133 377 aa9.25□□□□□ -0.93
VEGFA-212ENST00000480614 ZNF792Q3KQV3 632 aa9.25□□□□□ -0.93
VEGFA-212ENST00000480614 SLC37A3Q8NCC5 494 aa9.25□□□□□ -0.93
VEGFA-212ENST00000480614 SMG8Q8ND04 991 aaKnown RBP9.25□□□□□ -0.93
VEGFA-212ENST00000480614 PYURFQ96I23 114 aa9.25□□□□□ -0.93
VEGFA-212ENST00000480614 ENPP3O14638 875 aa9.25□□□□□ -0.93
VEGFA-212ENST00000480614 CTBP2P56545 445 aa9.25□□□□□ -0.93
VEGFA-212ENST00000480614 CYBRD1Q53TN4 286 aa9.25□□□□□ -0.93
VEGFA-212ENST00000480614 HGSNATQ68CP4 663 aa9.25□□□□□ -0.93
VEGFA-212ENST00000480614 ZNF783Q6ZMS7 281 aa9.25□□□□□ -0.93
VEGFA-212ENST00000480614 LAS2Q8IYD9 372 aa9.25□□□□□ -0.93
VEGFA-212ENST00000480614 FCAMRQ8WWV6 532 aa9.25□□□□□ -0.93
VEGFA-212ENST00000480614 CD93Q9NPY3 652 aa9.25□□□□□ -0.93
VEGFA-212ENST00000480614 SLC2A4RGQ9NR83 387 aa9.25□□□□□ -0.93
VEGFA-212ENST00000480614 IL33O95760 270 aa9.25□□□□□ -0.93
VEGFA-212ENST00000480614 ACP5P13686 325 aa9.25□□□□□ -0.93
VEGFA-212ENST00000480614 PBX1P40424 430 aa9.25□□□□□ -0.93
VEGFA-212ENST00000480614 GLT8D1Q68CQ7 371 aa9.25□□□□□ -0.93
VEGFA-212ENST00000480614 FITM2Q8N6M3 262 aa9.25□□□□□ -0.93
VEGFA-212ENST00000480614 POC1BQ8TC44 478 aa9.25□□□□□ -0.93
VEGFA-212ENST00000480614 POF1BQ8WVV4 589 aa9.25□□□□□ -0.93
VEGFA-212ENST00000480614 ACTR3BQ9P1U1 418 aa9.25□□□□□ -0.93
VEGFA-212ENST00000480614 RICTORQ6R327 1708 aa9.25□□□□□ -0.93
VEGFA-212ENST00000480614 EI24O14681 340 aa9.25□□□□□ -0.93
VEGFA-212ENST00000480614 MAGP20916 626 aa9.25□□□□□ -0.93
VEGFA-212ENST00000480614 QPCTQ16769 361 aa9.25□□□□□ -0.93
VEGFA-212ENST00000480614 ZNF367Q7RTV3 350 aa9.25□□□□□ -0.93
VEGFA-212ENST00000480614 MGAT4BQ9UQ53 548 aa9.25□□□□□ -0.93
VEGFA-212ENST00000480614 RNF6Q9Y252 685 aa9.25□□□□□ -0.93
VEGFA-212ENST00000480614 RGPD2P0DJD1 1756 aa9.25□□□□□ -0.93
VEGFA-212ENST00000480614 SOCS5O75159 536 aa9.25□□□□□ -0.93
VEGFA-212ENST00000480614 LHCGRP22888 699 aa9.25□□□□□ -0.93
VEGFA-212ENST00000480614 UTS2BQ765I0 119 aa9.25□□□□□ -0.93
VEGFA-212ENST00000480614 ZNF572Q7Z3I7 529 aaPredicted RBP9.25□□□□□ -0.93
VEGFA-212ENST00000480614 DCBLD1Q8N8Z6 715 aa9.25□□□□□ -0.93
VEGFA-212ENST00000480614 HSH2DQ96JZ2 352 aa9.25□□□□□ -0.93
VEGFA-212ENST00000480614 RANBP3Q9H6Z4 567 aaPredicted RBP9.25□□□□□ -0.93
VEGFA-212ENST00000480614 NDRG2Q9UN36 371 aaKnown RBP9.25□□□□□ -0.93
VEGFA-212ENST00000480614 S100PP25815 95 aa9.25□□□□□ -0.93
VEGFA-212ENST00000480614 LRRC66Q68CR7 880 aa9.25□□□□□ -0.93
VEGFA-212ENST00000480614 MOB2Q70IA6 237 aa9.25□□□□□ -0.93
VEGFA-212ENST00000480614 TRIB3Q96RU7 358 aa9.25□□□□□ -0.93
VEGFA-212ENST00000480614 NUFIP1Q9UHK0 495 aaKnown RBP9.25□□□□□ -0.93
VEGFA-212ENST00000480614 INSL6Q9Y581 213 aa9.25□□□□□ -0.93
VEGFA-212ENST00000480614 A0A0G2JLL6 359 aaPredicted RBP9.25□□□□□ -0.93
VEGFA-212ENST00000480614 A0A1W2PP18 115 aa9.25□□□□□ -0.93
VEGFA-212ENST00000480614 FTCDNL1E5RQL4 147 aa9.25□□□□□ -0.93
VEGFA-212ENST00000480614 CSN2P05814 226 aa9.25□□□□□ -0.93
VEGFA-212ENST00000480614 VAMP1P23763 118 aa9.25□□□□□ -0.93
VEGFA-212ENST00000480614 KCNJ5P48544 419 aa9.25□□□□□ -0.93
VEGFA-212ENST00000480614 CHRFAM7AQ494W8 412 aa9.25□□□□□ -0.93
VEGFA-212ENST00000480614 PGM2L1Q6PCE3 622 aa9.25□□□□□ -0.93
VEGFA-212ENST00000480614 PRRT2Q7Z6L0 340 aaPredicted RBP9.25□□□□□ -0.93
VEGFA-212ENST00000480614 PKP4Q99569 1192 aa9.25□□□□□ -0.93
VEGFA-212ENST00000480614 ARL5AQ9Y689 179 aa9.25□□□□□ -0.93
VEGFA-212ENST00000480614 C2orf71A6NGG8 1288 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms