RNA–Protein interactions for RNA: ENST00000480495.1

TDP2-205, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 1 (best)

Gene TDP2, Length 714 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-205ENST00000480495 ASF1BQ9NVP2 202 aa14.17□□□□□ -0.14
TDP2-205ENST00000480495 WWOXQ9NZC7 414 aa14.17□□□□□ -0.14
TDP2-205ENST00000480495 PTGFRNQ9P2B2 879 aa14.17□□□□□ -0.14
TDP2-205ENST00000480495 CSAG2Q9Y5P2 127 aa14.17□□□□□ -0.14
TDP2-205ENST00000480495 ESYT3A0FGR9 886 aa14.16□□□□□ -0.14
TDP2-205ENST00000480495 ZNF860A6NHJ4 632 aa14.16□□□□□ -0.14
TDP2-205ENST00000480495 MAGEB17A8MXT2 336 aa14.16□□□□□ -0.14
TDP2-205ENST00000480495 TAPBPO15533 448 aa14.16□□□□□ -0.14
TDP2-205ENST00000480495 CHST10O43529 356 aa14.16□□□□□ -0.14
TDP2-205ENST00000480495 STK16O75716 305 aa14.16□□□□□ -0.14
TDP2-205ENST00000480495 FAM155BO75949 473 aa14.16□□□□□ -0.14
TDP2-205ENST00000480495 SEC24DO94855 1032 aaPredicted RBP14.16□□□□□ -0.14
TDP2-205ENST00000480495 S100BP04271 92 aaPredicted RBP14.16□□□□□ -0.14
TDP2-205ENST00000480495 TUBB4AP04350 444 aa14.16□□□□□ -0.14
TDP2-205ENST00000480495 FHP07954 510 aa14.16□□□□□ -0.14
TDP2-205ENST00000480495 SMIM10L1P0DMW3 83 aa14.16□□□□□ -0.14
TDP2-205ENST00000480495 ITGAMP11215 1152 aa14.16□□□□□ -0.14
TDP2-205ENST00000480495 JAK1P23458 1154 aa14.16□□□□□ -0.14
TDP2-205ENST00000480495 STXBP1P61764 594 aaKnown RBP14.16□□□□□ -0.14
TDP2-205ENST00000480495 RHAGQ02094 409 aa14.16□□□□□ -0.14
TDP2-205ENST00000480495 SLMAPQ14BN4 828 aa14.16□□□□□ -0.14
TDP2-205ENST00000480495 OR4D1Q15615 310 aa14.16□□□□□ -0.14
TDP2-205ENST00000480495 C18orf21Q32NC0 220 aaPredicted RBP14.16□□□□□ -0.14
TDP2-205ENST00000480495 FHL5Q5TD97 284 aa14.16□□□□□ -0.14
TDP2-205ENST00000480495 PLAG1Q6DJT9 500 aa14.16□□□□□ -0.14
TDP2-205ENST00000480495 TMIGD1Q6UXZ0 262 aa14.16□□□□□ -0.14
TDP2-205ENST00000480495 LANCL3Q6ZV70 420 aa14.16□□□□□ -0.14
TDP2-205ENST00000480495 RAPH1Q70E73 1250 aa14.16□□□□□ -0.14
TDP2-205ENST00000480495 CCDC91Q7Z6B0 441 aa14.16□□□□□ -0.14
TDP2-205ENST00000480495 TBC1D1Q86TI0 1168 aaPredicted RBP14.16□□□□□ -0.14
TDP2-205ENST00000480495 SIRT6Q8N6T7 355 aa14.16□□□□□ -0.14
TDP2-205ENST00000480495 PDPRQ8NCN5 879 aa14.16□□□□□ -0.14
TDP2-205ENST00000480495 OR5T3Q8NGG3 340 aa14.16□□□□□ -0.14
TDP2-205ENST00000480495 STAG3L4Q8TBR4 150 aa14.16□□□□□ -0.14
TDP2-205ENST00000480495 CREB3L4Q8TEY5 395 aa14.16□□□□□ -0.14
TDP2-205ENST00000480495 HAS2Q92819 552 aa14.16□□□□□ -0.14
TDP2-205ENST00000480495 TBC1D20Q96BZ9 403 aa14.16□□□□□ -0.14
TDP2-205ENST00000480495 SMIM10Q96HG1 83 aa14.16□□□□□ -0.14
TDP2-205ENST00000480495 TMEM79Q9BSE2 394 aa14.16□□□□□ -0.14
TDP2-205ENST00000480495 TSPYL1Q9H0U9 437 aa14.16□□□□□ -0.14
TDP2-205ENST00000480495 EHD1Q9H4M9 534 aa14.16□□□□□ -0.14
TDP2-205ENST00000480495 NMRAL1Q9HBL8 299 aa14.16□□□□□ -0.14
TDP2-205ENST00000480495 AGPAT4Q9NRZ5 378 aa14.16□□□□□ -0.14
TDP2-205ENST00000480495 LANCL2Q9NS86 450 aa14.16□□□□□ -0.14
TDP2-205ENST00000480495 CD274Q9NZQ7 290 aa14.16□□□□□ -0.14
TDP2-205ENST00000480495 COPG2Q9UBF2 871 aa14.16□□□□□ -0.14
TDP2-205ENST00000480495 TEKT2Q9UIF3 430 aa14.16□□□□□ -0.14
TDP2-205ENST00000480495 PTBP2Q9UKA9 531 aaKnown RBP14.16□□□□□ -0.14
TDP2-205ENST00000480495 RNF112Q9ULX5 631 aa14.16□□□□□ -0.14
TDP2-205ENST00000480495 DOCK10Q96BY6 2186 aa14.16□□□□□ -0.14
TDP2-205ENST00000480495 PRRC2CQ9Y520 2896 aaKnown RBP14.16□□□□□ -0.14
TDP2-205ENST00000480495 CLGNO14967 610 aa14.15□□□□□ -0.14
TDP2-205ENST00000480495 CELA2AP08217 269 aa14.15□□□□□ -0.14
TDP2-205ENST00000480495 SLC35E2BP0CK96 405 aa14.15□□□□□ -0.14
TDP2-205ENST00000480495 HPDP32754 393 aaPredicted RBP14.15□□□□□ -0.14
TDP2-205ENST00000480495 PHBP35232 272 aa14.15□□□□□ -0.14
TDP2-205ENST00000480495 ARG2P78540 354 aa14.15□□□□□ -0.14
TDP2-205ENST00000480495 HYAL2Q12891 473 aa14.15□□□□□ -0.14
TDP2-205ENST00000480495 SLBPQ14493 270 aaKnown RBP eCLIP14.15□□□□□ -0.14
TDP2-205ENST00000480495 ABRAXAS2Q15018 415 aa14.15□□□□□ -0.14
TDP2-205ENST00000480495 NSDHLQ15738 373 aa14.15□□□□□ -0.14
TDP2-205ENST00000480495 EXT1Q16394 746 aa14.15□□□□□ -0.14
TDP2-205ENST00000480495 BTBD16Q32M84 506 aa14.15□□□□□ -0.14
TDP2-205ENST00000480495 TOR1AIP1Q5JTV8 583 aa14.15□□□□□ -0.14
TDP2-205ENST00000480495 RPUSD3Q6P087 351 aaKnown RBP14.15□□□□□ -0.14
TDP2-205ENST00000480495 SHISA5Q8N114 240 aa14.15□□□□□ -0.14
TDP2-205ENST00000480495 MMGT1Q8N4V1 131 aa14.15□□□□□ -0.14
TDP2-205ENST00000480495 MNS1Q8NEH6 495 aa14.15□□□□□ -0.14
TDP2-205ENST00000480495 RNF32Q9H0A6 362 aa14.15□□□□□ -0.14
TDP2-205ENST00000480495 MTRF1LQ9UGC7 380 aaKnown RBP14.15□□□□□ -0.14
TDP2-205ENST00000480495 SHANK1Q9Y566 2161 aa14.15□□□□□ -0.15
TDP2-205ENST00000480495 RP1L1Q8IWN7 2480 aaPredicted RBP14.14□□□□□ -0.15
TDP2-205ENST00000480495 TRAV17A0A0B4J275 112 aa14.14□□□□□ -0.15
TDP2-205ENST00000480495 IGHV3-20A0A0C4DH32 117 aa14.14□□□□□ -0.15
TDP2-205ENST00000480495 CCDC189A1A4V9 331 aa14.14□□□□□ -0.15
TDP2-205ENST00000480495 CTAGE15A4D2H0 777 aa14.14□□□□□ -0.15
TDP2-205ENST00000480495 OR2W5A6NFC9 320 aa14.14□□□□□ -0.15
TDP2-205ENST00000480495 CDC123O75794 336 aaPredicted RBP14.14□□□□□ -0.15
TDP2-205ENST00000480495 CBX6O95503 412 aa14.14□□□□□ -0.15
TDP2-205ENST00000480495 B3GALT4O96024 378 aa14.14□□□□□ -0.15
TDP2-205ENST00000480495 LTA4HP09960 611 aaKnown RBP14.14□□□□□ -0.15
TDP2-205ENST00000480495 RNH1P13489 461 aaKnown RBP14.14□□□□□ -0.15
TDP2-205ENST00000480495 HNF4AP41235 474 aa14.14□□□□□ -0.15
TDP2-205ENST00000480495 HSPA7P48741 367 aa14.14□□□□□ -0.15
TDP2-205ENST00000480495 RAB8AP61006 207 aa14.14□□□□□ -0.15
TDP2-205ENST00000480495 ACTN3Q08043 901 aaPredicted RBP14.14□□□□□ -0.15
TDP2-205ENST00000480495 MRPL49Q13405 166 aaKnown RBP14.14□□□□□ -0.15
TDP2-205ENST00000480495 NR6A1Q15406 480 aa14.14□□□□□ -0.15
TDP2-205ENST00000480495 PDK4Q16654 411 aa14.14□□□□□ -0.15
TDP2-205ENST00000480495 SFT2D3Q587I9 215 aa14.14□□□□□ -0.15
TDP2-205ENST00000480495 ABHD17BQ5VST6 288 aa14.14□□□□□ -0.15
TDP2-205ENST00000480495 CMC1Q7Z7K0 106 aa14.14□□□□□ -0.15
TDP2-205ENST00000480495 ISCA2Q86U28 154 aa14.14□□□□□ -0.15
TDP2-205ENST00000480495 CTAGE6Q86UF2 777 aa14.14□□□□□ -0.15
TDP2-205ENST00000480495 RELL1Q8IUW5 271 aa14.14□□□□□ -0.15
TDP2-205ENST00000480495 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.14□□□□□ -0.15
TDP2-205ENST00000480495 SNX31Q8N9S9 440 aa14.14□□□□□ -0.15
TDP2-205ENST00000480495 CATSPER1Q8NEC5 780 aa14.14□□□□□ -0.15
TDP2-205ENST00000480495 OR1N1Q8NGS0 311 aa14.14□□□□□ -0.15
TDP2-205ENST00000480495 M1APQ8TC57 530 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms