RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 KLHL18O94889 574 aa6.54□□□□□ -1.36
BRCA1-215ENST00000478531 NSA2O95478 260 aaKnown RBP6.54□□□□□ -1.36
BRCA1-215ENST00000478531 RPS17P08708 135 aaKnown RBP6.54□□□□□ -1.36
BRCA1-215ENST00000478531 MYL2P10916 166 aa6.54□□□□□ -1.36
BRCA1-215ENST00000478531 ATP5F1P24539 256 aaPredicted RBP6.54□□□□□ -1.36
BRCA1-215ENST00000478531 HNRNPH1P31943 449 aaKnown RBP6.54□□□□□ -1.36
BRCA1-215ENST00000478531 HERVK_113P63132 956 aa6.54□□□□□ -1.36
BRCA1-215ENST00000478531 OLR1P78380 273 aa6.54□□□□□ -1.36
BRCA1-215ENST00000478531 LAPTM5Q13571 262 aa6.54□□□□□ -1.36
BRCA1-215ENST00000478531 FAM53BQ14153 422 aa6.54□□□□□ -1.36
BRCA1-215ENST00000478531 HERC3Q15034 1050 aa6.54□□□□□ -1.36
BRCA1-215ENST00000478531 TBCCQ15814 346 aa6.54□□□□□ -1.36
BRCA1-215ENST00000478531 NKG7Q16617 165 aa6.54□□□□□ -1.36
BRCA1-215ENST00000478531 CPSF6Q16630 551 aaKnown RBP eCLIP6.54□□□□□ -1.36
BRCA1-215ENST00000478531 UGT8Q16880 541 aa6.54□□□□□ -1.36
BRCA1-215ENST00000478531 VWA2Q5GFL6 755 aa6.54□□□□□ -1.36
BRCA1-215ENST00000478531 CEP85LQ5SZL2 805 aa6.54□□□□□ -1.36
BRCA1-215ENST00000478531 GRHL2Q6ISB3 625 aa6.54□□□□□ -1.36
BRCA1-215ENST00000478531 MED27Q6P2C8 311 aa6.54□□□□□ -1.36
BRCA1-215ENST00000478531 SH2D5Q6ZV89 423 aa6.54□□□□□ -1.36
BRCA1-215ENST00000478531 OVCH1Q7RTY7 1134 aa6.54□□□□□ -1.36
BRCA1-215ENST00000478531 VN1R5Q7Z5H4 357 aa6.54□□□□□ -1.36
BRCA1-215ENST00000478531 TRABD2AQ86V40 505 aa6.54□□□□□ -1.36
BRCA1-215ENST00000478531 PDSS2Q86YH6 399 aa6.54□□□□□ -1.36
BRCA1-215ENST00000478531 SHISA5Q8N114 240 aa6.54□□□□□ -1.36
BRCA1-215ENST00000478531 RNF175Q8N4F7 328 aa6.54□□□□□ -1.36
BRCA1-215ENST00000478531 TMEM151AQ8N4L1 468 aa6.54□□□□□ -1.36
BRCA1-215ENST00000478531 OR5T3Q8NGG3 340 aa6.54□□□□□ -1.36
BRCA1-215ENST00000478531 OR2Y1Q8NGV0 311 aa6.54□□□□□ -1.36
BRCA1-215ENST00000478531 NT5CQ8TCD5 201 aa6.54□□□□□ -1.36
BRCA1-215ENST00000478531 STT3BQ8TCJ2 826 aa6.54□□□□□ -1.36
BRCA1-215ENST00000478531 CREB3L4Q8TEY5 395 aa6.54□□□□□ -1.36
BRCA1-215ENST00000478531 SNRNP27Q8WVK2 155 aaKnown RBP6.54□□□□□ -1.36
BRCA1-215ENST00000478531 MIEF2Q96C03 454 aa6.54□□□□□ -1.36
BRCA1-215ENST00000478531 APOPT1Q96IL0 206 aa6.54□□□□□ -1.36
BRCA1-215ENST00000478531 TMEM237Q96Q45 408 aa6.54□□□□□ -1.36
BRCA1-215ENST00000478531 MTERF1Q99551 399 aaKnown RBP6.54□□□□□ -1.36
BRCA1-215ENST00000478531 ARHGAP9Q9BRR9 750 aa6.54□□□□□ -1.36
BRCA1-215ENST00000478531 CRB3Q9BUF7 120 aa6.54□□□□□ -1.36
BRCA1-215ENST00000478531 ERVK-6Q9BXR3 956 aa6.54□□□□□ -1.36
BRCA1-215ENST00000478531 ZNF490Q9ULM2 529 aaPredicted RBP6.54□□□□□ -1.36
BRCA1-215ENST00000478531 POLHQ9Y253 713 aa6.54□□□□□ -1.36
BRCA1-215ENST00000478531 MAP4K5Q9Y4K4 846 aa6.54□□□□□ -1.36
BRCA1-215ENST00000478531 DOCK10Q96BY6 2186 aa6.54□□□□□ -1.36
BRCA1-215ENST00000478531 CNTRLQ7Z7A1 2325 aa6.54□□□□□ -1.36
BRCA1-215ENST00000478531 CCDC151A5D8V7 595 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 URADA6NGE7 173 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 OR7A17O14581 309 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 PLIN3O60664 434 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 CDC123O75794 336 aaPredicted RBP6.53□□□□□ -1.36
BRCA1-215ENST00000478531 SUPT7LO94864 414 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 PROCP04070 461 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 UMODP07911 640 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 SERPINA6P08185 405 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 ZGLP1P0C6A0 271 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 FAM87AP0C7U9 286 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 ALOX12P18054 663 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 CRHR1P34998 444 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 XCR1P46094 333 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 PLA2G16P53816 162 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 CDH13P55290 713 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 STXBP1P61764 594 aaKnown RBP6.53□□□□□ -1.36
BRCA1-215ENST00000478531 SKP1P63208 163 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 KLC1Q07866 573 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 HYAL2Q12891 473 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 CHAF1BQ13112 559 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 ATP1A4Q13733 1029 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 TBR1Q16650 682 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 CCDC153Q494R4 210 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 MINDY4Q4G0A6 757 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 ZNF678Q5SXM1 525 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 FAM219BQ5XKK7 198 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 CPZQ66K79 652 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 FAAH2Q6GMR7 532 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 BORAQ6PGQ7 559 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 MRGPREQ86SM8 312 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 RAB43Q86YS6 212 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 CCNYL1Q8N7R7 359 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 UTP15Q8TED0 518 aaKnown RBP6.53□□□□□ -1.36
BRCA1-215ENST00000478531 TRPC4APQ8TEL6 797 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 ZNF483Q8TF39 744 aaPredicted RBP6.53□□□□□ -1.36
BRCA1-215ENST00000478531 UBE2E3Q969T4 207 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 WDR34Q96EX3 536 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 FAR2Q96K12 515 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 CATSPER2Q96P56 530 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 SMC6Q96SB8 1091 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 SPSB2Q99619 263 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 SLC6A16Q9GZN6 736 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 PITHD1Q9GZP4 211 aaPredicted RBP6.53□□□□□ -1.36
BRCA1-215ENST00000478531 REXO4Q9GZR2 422 aaKnown RBP6.53□□□□□ -1.36
BRCA1-215ENST00000478531 AICDAQ9GZX7 198 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 SLC26A1Q9H2B4 701 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 WDR54Q9H977 334 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 ZBTB26Q9HCK0 441 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 MKKSQ9NPJ1 570 aaPredicted RBP6.53□□□□□ -1.36
BRCA1-215ENST00000478531 NXT1Q9UKK6 140 aaKnown RBP6.53□□□□□ -1.36
BRCA1-215ENST00000478531 GRID1Q9ULK0 1009 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 RNF11Q9Y3C5 154 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 SLC22A7Q9Y694 548 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 A0A1B0GTL3 188 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms