RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, humanhuman

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-210ENST00000478169 TFF3Q07654 80 aa9.04□□□□□ -0.96
CCM2-210ENST00000478169 PWP1Q13610 501 aa9.04□□□□□ -0.96
CCM2-210ENST00000478169 DHX34Q14147 1143 aaKnown RBP9.04□□□□□ -0.96
CCM2-210ENST00000478169 ZNF470Q6ECI4 717 aa9.04□□□□□ -0.96
CCM2-210ENST00000478169 ZNF549Q6P9A3 640 aa9.04□□□□□ -0.96
CCM2-210ENST00000478169 LCTLQ6UWM7 567 aa9.04□□□□□ -0.96
CCM2-210ENST00000478169 QSOX2Q6ZRP7 698 aa9.04□□□□□ -0.96
CCM2-210ENST00000478169 CD163Q86VB7 1156 aa9.04□□□□□ -0.96
CCM2-210ENST00000478169 ZNF227Q86WZ6 799 aa9.04□□□□□ -0.96
CCM2-210ENST00000478169 TMEM139Q8IV31 216 aa9.04□□□□□ -0.96
CCM2-210ENST00000478169 SULF2Q8IWU5 870 aa9.04□□□□□ -0.96
CCM2-210ENST00000478169 DMRTC2Q8IXT2 367 aaPredicted RBP9.04□□□□□ -0.96
CCM2-210ENST00000478169 LMNTD2Q8IXW0 634 aa9.04□□□□□ -0.96
CCM2-210ENST00000478169 KIF2BQ8N4N8 673 aa9.04□□□□□ -0.96
CCM2-210ENST00000478169 OR5T3Q8NGG3 340 aa9.04□□□□□ -0.96
CCM2-210ENST00000478169 C16orf52Q8NHV5 167 aa9.04□□□□□ -0.96
CCM2-210ENST00000478169 CD200R1Q8TD46 325 aa9.04□□□□□ -0.96
CCM2-210ENST00000478169 PTCHD1Q96NR3 888 aa9.04□□□□□ -0.96
CCM2-210ENST00000478169 GPR21Q99679 349 aa9.04□□□□□ -0.96
CCM2-210ENST00000478169 SGPP1Q9BX95 441 aa9.04□□□□□ -0.96
CCM2-210ENST00000478169 RBCK1Q9BYM8 510 aa9.04□□□□□ -0.96
CCM2-210ENST00000478169 TP63Q9H3D4 680 aaPredicted RBP9.04□□□□□ -0.96
CCM2-210ENST00000478169 CLK4Q9HAZ1 481 aaKnown RBP9.04□□□□□ -0.96
CCM2-210ENST00000478169 SAMD15Q9P1V8 674 aa9.04□□□□□ -0.96
CCM2-210ENST00000478169 KCNN3Q9UGI6 736 aa9.04□□□□□ -0.96
CCM2-210ENST00000478169 ACANP16112 2415 aa9.03□□□□□ -0.96
CCM2-210ENST00000478169 MPDZO75970 2070 aa9.03□□□□□ -0.96
CCM2-210ENST00000478169 TCRBV7S3A2A0A539 114 aa9.03□□□□□ -0.96
CCM2-210ENST00000478169 TCRBV16S1A1N1A0A5B0 115 aa9.03□□□□□ -0.96
CCM2-210ENST00000478169 FAM221AA4D161 298 aa9.03□□□□□ -0.96
CCM2-210ENST00000478169 ZNF860A6NHJ4 632 aa9.03□□□□□ -0.96
CCM2-210ENST00000478169 SAGE2PA6NJ88 616 aa9.03□□□□□ -0.96
CCM2-210ENST00000478169 USP27XA6NNY8 438 aa9.03□□□□□ -0.96
CCM2-210ENST00000478169 SLC16A5O15375 505 aa9.03□□□□□ -0.96
CCM2-210ENST00000478169 CHST10O43529 356 aa9.03□□□□□ -0.96
CCM2-210ENST00000478169 PRMT3O60678 531 aa9.03□□□□□ -0.96
CCM2-210ENST00000478169 AVILO75366 819 aa9.03□□□□□ -0.96
CCM2-210ENST00000478169 TOXO94900 526 aa9.03□□□□□ -0.96
CCM2-210ENST00000478169 C8GP07360 202 aa9.03□□□□□ -0.96
CCM2-210ENST00000478169 CDH1P12830 882 aa9.03□□□□□ -0.96
CCM2-210ENST00000478169 NPPBP16860 134 aa9.03□□□□□ -0.96
CCM2-210ENST00000478169 ALOX12P18054 663 aa9.03□□□□□ -0.96
CCM2-210ENST00000478169 TFEBP19484 476 aa9.03□□□□□ -0.96
CCM2-210ENST00000478169 MSX1P28360 303 aa9.03□□□□□ -0.96
CCM2-210ENST00000478169 MAGEA6P43360 314 aa9.03□□□□□ -0.96
CCM2-210ENST00000478169 MEOX1P50221 254 aa9.03□□□□□ -0.96
CCM2-210ENST00000478169 SP140Q13342 867 aa9.03□□□□□ -0.96
CCM2-210ENST00000478169 CTBP1Q13363 440 aa9.03□□□□□ -0.96
CCM2-210ENST00000478169 NAE1Q13564 534 aa9.03□□□□□ -0.96
CCM2-210ENST00000478169 THOC5Q13769 683 aaKnown RBP9.03□□□□□ -0.96
CCM2-210ENST00000478169 DEFB134Q4QY38 66 aa9.03□□□□□ -0.96
CCM2-210ENST00000478169 CES4AQ5XG92 561 aa9.03□□□□□ -0.96
CCM2-210ENST00000478169 UGT3A1Q6NUS8 523 aa9.03□□□□□ -0.96
CCM2-210ENST00000478169 CASC4Q6P4E1 433 aa9.03□□□□□ -0.96
CCM2-210ENST00000478169 ARHGAP11AQ6P4F7 1023 aa9.03□□□□□ -0.96
CCM2-210ENST00000478169 AGTRAPQ6RW13 159 aa9.03□□□□□ -0.96
CCM2-210ENST00000478169 CEP128Q6ZU80 1094 aa9.03□□□□□ -0.96
CCM2-210ENST00000478169 PIWIL4Q7Z3Z4 852 aaKnown RBP9.03□□□□□ -0.96
CCM2-210ENST00000478169 STRA8Q7Z7C7 330 aa9.03□□□□□ -0.96
CCM2-210ENST00000478169 DENND6AQ8IWF6 608 aa9.03□□□□□ -0.96
CCM2-210ENST00000478169 PALM2Q8IXS6 379 aa9.03□□□□□ -0.96
CCM2-210ENST00000478169 CPNE9Q8IYJ1 553 aa9.03□□□□□ -0.96
CCM2-210ENST00000478169 CYP4X1Q8N118 509 aa9.03□□□□□ -0.96
CCM2-210ENST00000478169 MARVELD2Q8N4S9 558 aa9.03□□□□□ -0.96
CCM2-210ENST00000478169 TBC1D19Q8N5T2 526 aa9.03□□□□□ -0.96
CCM2-210ENST00000478169 ZFP62Q8NB50 900 aaPredicted RBP9.03□□□□□ -0.96
CCM2-210ENST00000478169 ZNF740Q8NDX6 193 aa9.03□□□□□ -0.96
CCM2-210ENST00000478169 NFAM1Q8NET5 270 aaPredicted RBP9.03□□□□□ -0.96
CCM2-210ENST00000478169 ABHD11Q8NFV4 315 aa9.03□□□□□ -0.96
CCM2-210ENST00000478169 OR4K1Q8NGD4 311 aa9.03□□□□□ -0.96
CCM2-210ENST00000478169 CALML6Q8TD86 181 aa9.03□□□□□ -0.96
CCM2-210ENST00000478169 MAIP1Q8WWC4 291 aa9.03□□□□□ -0.96
CCM2-210ENST00000478169 RND1Q92730 232 aa9.03□□□□□ -0.96
CCM2-210ENST00000478169 ZNF669Q96BR6 464 aaPredicted RBP9.03□□□□□ -0.96
CCM2-210ENST00000478169 ZNF559Q9BR84 538 aa9.03□□□□□ -0.96
CCM2-210ENST00000478169 DESI2Q9BSY9 194 aa9.03□□□□□ -0.96
CCM2-210ENST00000478169 HAUS8Q9BT25 410 aa9.03□□□□□ -0.96
CCM2-210ENST00000478169 DEFB126Q9BYW3 111 aa9.03□□□□□ -0.96
CCM2-210ENST00000478169 ATG10Q9H0Y0 220 aa9.03□□□□□ -0.96
CCM2-210ENST00000478169 PARVBQ9HBI1 364 aa9.03□□□□□ -0.96
CCM2-210ENST00000478169 KCNJ16Q9NPI9 418 aa9.03□□□□□ -0.96
CCM2-210ENST00000478169 NPDC1Q9NQX5 325 aaPredicted RBP9.03□□□□□ -0.96
CCM2-210ENST00000478169 FBXO6Q9NRD1 293 aaPredicted RBP9.03□□□□□ -0.96
CCM2-210ENST00000478169 SH2B3Q9UQQ2 575 aa9.03□□□□□ -0.96
CCM2-210ENST00000478169 PDE10AQ9Y233 779 aa9.03□□□□□ -0.96
CCM2-210ENST00000478169 RNF6Q9Y252 685 aa9.03□□□□□ -0.96
CCM2-210ENST00000478169 HRH3Q9Y5N1 445 aa9.03□□□□□ -0.96
CCM2-210ENST00000478169 ARHGAP21Q5T5U3 1957 aa9.03□□□□□ -0.96
CCM2-210ENST00000478169 ANKHD1Q8IWZ3 2542 aaKnown RBP9.02□□□□□ -0.96
CCM2-210ENST00000478169 ZNF469Q96JG9 3925 aaPredicted RBP9.02□□□□□ -0.97
CCM2-210ENST00000478169 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.02□□□□□ -0.97
CCM2-210ENST00000478169 IGKV3D-11A0A0A0MRZ8 115 aa9.02□□□□□ -0.97
CCM2-210ENST00000478169 ZCWPW2A0A1B0GU75 182 aa9.02□□□□□ -0.97
CCM2-210ENST00000478169 TRBC2A0A5B9 178 aa9.02□□□□□ -0.97
CCM2-210ENST00000478169 NKX2-6A6NCS4 301 aa9.02□□□□□ -0.97
CCM2-210ENST00000478169 SDR42E2A6NKP2 422 aa9.02□□□□□ -0.97
CCM2-210ENST00000478169 NDUFS4O43181 175 aa9.02□□□□□ -0.97
CCM2-210ENST00000478169 OR1F1O43749 312 aa9.02□□□□□ -0.97
CCM2-210ENST00000478169 PEX1O43933 1283 aa9.02□□□□□ -0.97
CCM2-210ENST00000478169 HS6ST1O60243 411 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms