RNA–Protein interactions for RNA: ENST00000477928.1

SOX2-OT-208, SOX2 overlapping transcript, humanhuman

TSL 2 BASIC

Gene SOX2-OT, Length 902 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-208ENST00000477928 CD274Q9NZQ7 290 aa13.07□□□□□ -0.32
SOX2-OT-208ENST00000477928 TMCO1Q9UM00 188 aa13.07□□□□□ -0.32
SOX2-OT-208ENST00000477928 USP9XQ93008 2570 aaPredicted RBP13.07□□□□□ -0.32
SOX2-OT-208ENST00000477928 LOC102723996A0A087X1L8 192 aa13.06□□□□□ -0.32
SOX2-OT-208ENST00000477928 A0A096LPK6 155 aa13.06□□□□□ -0.32
SOX2-OT-208ENST00000477928 HMX2A2RU54 273 aa13.06□□□□□ -0.32
SOX2-OT-208ENST00000477928 SYNDIG1LA6NDD5 238 aa13.06□□□□□ -0.32
SOX2-OT-208ENST00000477928 MAP2K7O14733 419 aa13.06□□□□□ -0.32
SOX2-OT-208ENST00000477928 NDUFS4O43181 175 aa13.06□□□□□ -0.32
SOX2-OT-208ENST00000477928 ACSL3O95573 720 aa13.06□□□□□ -0.32
SOX2-OT-208ENST00000477928 HPP00738 406 aa13.06□□□□□ -0.32
SOX2-OT-208ENST00000477928 ICAM2P13598 275 aa13.06□□□□□ -0.32
SOX2-OT-208ENST00000477928 TFEBP19484 476 aa13.06□□□□□ -0.32
SOX2-OT-208ENST00000477928 GNLYP22749 145 aa13.06□□□□□ -0.32
SOX2-OT-208ENST00000477928 VARSP26640 1264 aaKnown RBP13.06□□□□□ -0.32
SOX2-OT-208ENST00000477928 SERPINB1P30740 379 aa13.06□□□□□ -0.32
SOX2-OT-208ENST00000477928 CASP2P42575 452 aa13.06□□□□□ -0.32
SOX2-OT-208ENST00000477928 MSH2P43246 934 aa13.06□□□□□ -0.32
SOX2-OT-208ENST00000477928 MAGEA12P43365 314 aa13.06□□□□□ -0.32
SOX2-OT-208ENST00000477928 EMP2P54851 167 aa13.06□□□□□ -0.32
SOX2-OT-208ENST00000477928 STXBP1P61764 594 aaKnown RBP13.06□□□□□ -0.32
SOX2-OT-208ENST00000477928 EFTUD2Q15029 972 aaKnown RBP eCLIP13.06□□□□□ -0.32
SOX2-OT-208ENST00000477928 OR4D1Q15615 310 aa13.06□□□□□ -0.32
SOX2-OT-208ENST00000477928 PDK4Q16654 411 aa13.06□□□□□ -0.32
SOX2-OT-208ENST00000477928 TSNAXIP1Q2TAA8 658 aa13.06□□□□□ -0.32
SOX2-OT-208ENST00000477928 FBXO48Q5FWF7 155 aa13.06□□□□□ -0.32
SOX2-OT-208ENST00000477928 IGFL3Q6UXB1 125 aa13.06□□□□□ -0.32
SOX2-OT-208ENST00000477928 SLCO4C1Q6ZQN7 724 aa13.06□□□□□ -0.32
SOX2-OT-208ENST00000477928 CMC1Q7Z7K0 106 aa13.06□□□□□ -0.32
SOX2-OT-208ENST00000477928 LCA5Q86VQ0 697 aa13.06□□□□□ -0.32
SOX2-OT-208ENST00000477928 CPT1CQ8TCG5 803 aa13.06□□□□□ -0.32
SOX2-OT-208ENST00000477928 MTBPQ96DY7 904 aa13.06□□□□□ -0.32
SOX2-OT-208ENST00000477928 PTCD3Q96EY7 689 aaKnown RBP13.06□□□□□ -0.32
SOX2-OT-208ENST00000477928 PAFAH2Q99487 392 aa13.06□□□□□ -0.32
SOX2-OT-208ENST00000477928 TMEM79Q9BSE2 394 aa13.06□□□□□ -0.32
SOX2-OT-208ENST00000477928 EFCAB11Q9BUY7 163 aa13.06□□□□□ -0.32
SOX2-OT-208ENST00000477928 RBCK1Q9BYM8 510 aa13.06□□□□□ -0.32
SOX2-OT-208ENST00000477928 SLC6A16Q9GZN6 736 aa13.06□□□□□ -0.32
SOX2-OT-208ENST00000477928 HCN3Q9P1Z3 774 aa13.06□□□□□ -0.32
SOX2-OT-208ENST00000477928 C19orf25Q9UFG5 118 aaPredicted RBP13.06□□□□□ -0.32
SOX2-OT-208ENST00000477928 TNPO3Q9Y5L0 923 aaKnown RBP13.06□□□□□ -0.32
SOX2-OT-208ENST00000477928 DOCK10Q96BY6 2186 aa13.05□□□□□ -0.32
SOX2-OT-208ENST00000477928 A0A088AWK7 358 aa13.05□□□□□ -0.32
SOX2-OT-208ENST00000477928 NCF1BA6NI72 391 aaPredicted RBP13.05□□□□□ -0.32
SOX2-OT-208ENST00000477928 NCF1CA8MVU1 366 aaPredicted RBP13.05□□□□□ -0.32
SOX2-OT-208ENST00000477928 IDSB3KWA1 339 aa13.05□□□□□ -0.32
SOX2-OT-208ENST00000477928 SGK494L7N484 410 aa13.05□□□□□ -0.32
SOX2-OT-208ENST00000477928 TAPBPO15533 448 aa13.05□□□□□ -0.32
SOX2-OT-208ENST00000477928 CLEC3AO75596 197 aa13.05□□□□□ -0.32
SOX2-OT-208ENST00000477928 BMP10O95393 424 aa13.05□□□□□ -0.32
SOX2-OT-208ENST00000477928 ALDOAP04075 364 aaKnown RBP13.05□□□□□ -0.32
SOX2-OT-208ENST00000477928 HEXBP07686 556 aa13.05□□□□□ -0.32
SOX2-OT-208ENST00000477928 RBP1P09455 135 aa13.05□□□□□ -0.32
SOX2-OT-208ENST00000477928 NCF1P14598 390 aaPredicted RBP13.05□□□□□ -0.32
SOX2-OT-208ENST00000477928 ACPPP15309 386 aa13.05□□□□□ -0.32
SOX2-OT-208ENST00000477928 ALOX12P18054 663 aa13.05□□□□□ -0.32
SOX2-OT-208ENST00000477928 ZNF10P21506 573 aaPredicted RBP13.05□□□□□ -0.32
SOX2-OT-208ENST00000477928 GDF5P43026 501 aa13.05□□□□□ -0.32
SOX2-OT-208ENST00000477928 AGTR2P50052 363 aa13.05□□□□□ -0.32
SOX2-OT-208ENST00000477928 INPP5JQ15735 1006 aaPredicted RBP13.05□□□□□ -0.32
SOX2-OT-208ENST00000477928 UAP1Q16222 522 aaPredicted RBP13.05□□□□□ -0.32
SOX2-OT-208ENST00000477928 HIST2H2ACQ16777 129 aaPredicted RBP13.05□□□□□ -0.32
SOX2-OT-208ENST00000477928 IRAK1BP1Q5VVH5 260 aa13.05□□□□□ -0.32
SOX2-OT-208ENST00000477928 HIST2H2AA3Q6FI13 130 aa13.05□□□□□ -0.32
SOX2-OT-208ENST00000477928 TMEM205Q6UW68 189 aa13.05□□□□□ -0.32
SOX2-OT-208ENST00000477928 TMIGD1Q6UXZ0 262 aa13.05□□□□□ -0.32
SOX2-OT-208ENST00000477928 NDUFAF7Q7L592 441 aa13.05□□□□□ -0.32
SOX2-OT-208ENST00000477928 CUZD1Q86UP6 607 aa13.05□□□□□ -0.32
SOX2-OT-208ENST00000477928 CENPLQ8N0S6 344 aaPredicted RBP13.05□□□□□ -0.32
SOX2-OT-208ENST00000477928 OR51Q1Q8NH59 317 aa13.05□□□□□ -0.32
SOX2-OT-208ENST00000477928 THOC3Q96J01 351 aaKnown RBP13.05□□□□□ -0.32
SOX2-OT-208ENST00000477928 CD244Q9BZW8 370 aa13.05□□□□□ -0.32
SOX2-OT-208ENST00000477928 ALG9Q9H6U8 611 aa13.05□□□□□ -0.32
SOX2-OT-208ENST00000477928 PPCSQ9HAB8 311 aa13.05□□□□□ -0.32
SOX2-OT-208ENST00000477928 ADGRE2Q9UHX3 823 aa13.05□□□□□ -0.32
SOX2-OT-208ENST00000477928 NFU1Q9UMS0 254 aa13.05□□□□□ -0.32
SOX2-OT-208ENST00000477928 NTNG1Q9Y2I2 539 aa13.05□□□□□ -0.32
SOX2-OT-208ENST00000477928 UTP20O75691 2785 aaKnown RBP13.05□□□□□ -0.32
SOX2-OT-208ENST00000477928 PTPN13Q12923 2485 aa13.04□□□□□ -0.32
SOX2-OT-208ENST00000477928 IGHV3-20A0A0C4DH32 117 aa13.04□□□□□ -0.32
SOX2-OT-208ENST00000477928 C4orf51C9J302 202 aa13.04□□□□□ -0.32
SOX2-OT-208ENST00000477928 K7EPI3 171 aa13.04□□□□□ -0.32
SOX2-OT-208ENST00000477928 KLK8O60259 260 aa13.04□□□□□ -0.32
SOX2-OT-208ENST00000477928 UGDHO60701 494 aa13.04□□□□□ -0.32
SOX2-OT-208ENST00000477928 GALR3O60755 368 aaPredicted RBP13.04□□□□□ -0.32
SOX2-OT-208ENST00000477928 RDH16O75452 317 aa13.04□□□□□ -0.32
SOX2-OT-208ENST00000477928 KLHL18O94889 574 aa13.04□□□□□ -0.32
SOX2-OT-208ENST00000477928 RNF224P0DH78 156 aa13.04□□□□□ -0.32
SOX2-OT-208ENST00000477928 SMIM10L1P0DMW3 83 aa13.04□□□□□ -0.32
SOX2-OT-208ENST00000477928 COX6A1P12074 109 aa13.04□□□□□ -0.32
SOX2-OT-208ENST00000477928 JAK1P23458 1154 aa13.04□□□□□ -0.32
SOX2-OT-208ENST00000477928 TNFRSF8P28908 595 aa13.04□□□□□ -0.32
SOX2-OT-208ENST00000477928 PIK3CGP48736 1102 aa13.04□□□□□ -0.32
SOX2-OT-208ENST00000477928 HSPA7P48741 367 aa13.04□□□□□ -0.32
SOX2-OT-208ENST00000477928 ST13P50502 369 aaKnown RBP13.04□□□□□ -0.32
SOX2-OT-208ENST00000477928 ALDH18A1P54886 795 aaKnown RBP13.04□□□□□ -0.32
SOX2-OT-208ENST00000477928 OLR1P78380 273 aa13.04□□□□□ -0.32
SOX2-OT-208ENST00000477928 DLG1Q12959 904 aa13.04□□□□□ -0.32
SOX2-OT-208ENST00000477928 MRPL49Q13405 166 aaKnown RBP13.04□□□□□ -0.32
SOX2-OT-208ENST00000477928 RBBP5Q15291 538 aaKnown RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms